RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 GTF2H5Q6ZYL4 71 aa15.63■□□□□ 0.09
CCDC50-202ENST00000392456 MOGAT3Q86VF5 341 aa15.63■□□□□ 0.09
CCDC50-202ENST00000392456 RALYQ9UKM9 306 aaKnown RBP15.63■□□□□ 0.09
CCDC50-202ENST00000392456 C17orf112F2Z3M2 114 aa15.62■□□□□ 0.09
CCDC50-202ENST00000392456 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.62■□□□□ 0.09
CCDC50-202ENST00000392456 K7EQM0 130 aa15.62■□□□□ 0.09
CCDC50-202ENST00000392456 ZNF737O75373 536 aa15.62■□□□□ 0.09
CCDC50-202ENST00000392456 KRASP01116 189 aa15.62■□□□□ 0.09
CCDC50-202ENST00000392456 NKX2-1P43699 371 aaPredicted RBP15.62■□□□□ 0.09
CCDC50-202ENST00000392456 ZNF146Q15072 292 aa15.62■□□□□ 0.09
CCDC50-202ENST00000392456 FAM201AQ5SY85 155 aa15.62■□□□□ 0.09
CCDC50-202ENST00000392456 LRRC29Q8WV35 223 aa15.62■□□□□ 0.09
CCDC50-202ENST00000392456 MRAP2Q96G30 205 aa15.62■□□□□ 0.09
CCDC50-202ENST00000392456 FAM110AQ9BQ89 295 aa15.62■□□□□ 0.09
CCDC50-202ENST00000392456 SLC33A1O00400 549 aaPredicted RBP15.62■□□□□ 0.09
CCDC50-202ENST00000392456 TNFSF12O43508 249 aa15.62■□□□□ 0.09
CCDC50-202ENST00000392456 S1PR2O95136 353 aa15.62■□□□□ 0.09
CCDC50-202ENST00000392456 NAPSAO96009 420 aa15.62■□□□□ 0.09
CCDC50-202ENST00000392456 PIGPP57054 158 aa15.62■□□□□ 0.09
CCDC50-202ENST00000392456 HSD52Q0P140 79 aa15.62■□□□□ 0.09
CCDC50-202ENST00000392456 CCDC144NLQ6NUI1 221 aa15.62■□□□□ 0.09
CCDC50-202ENST00000392456 ACP7Q6ZNF0 438 aa15.62■□□□□ 0.09
CCDC50-202ENST00000392456 Q8IYB0 196 aa15.62■□□□□ 0.09
CCDC50-202ENST00000392456 OR10V1Q8NGI7 309 aa15.62■□□□□ 0.09
CCDC50-202ENST00000392456 MRPL18Q9H0U6 180 aaKnown RBP15.62■□□□□ 0.09
CCDC50-202ENST00000392456 NGBQ9NPG2 151 aa15.62■□□□□ 0.09
CCDC50-202ENST00000392456 METRNQ9UJH8 293 aa15.62■□□□□ 0.09
CCDC50-202ENST00000392456 PSPNO60542 156 aa15.61■□□□□ 0.09
CCDC50-202ENST00000392456 OR10P1Q8NGE3 313 aa15.61■□□□□ 0.09
CCDC50-202ENST00000392456 CHRDL1Q9BU40 450 aa15.61■□□□□ 0.09
CCDC50-202ENST00000392456 CBLN1P23435 193 aa15.61■□□□□ 0.09
CCDC50-202ENST00000392456 CCL8P80075 99 aa15.61■□□□□ 0.09
CCDC50-202ENST00000392456 HAPLN4Q86UW8 402 aa15.61■□□□□ 0.09
CCDC50-202ENST00000392456 GCSAMQ8N6F7 178 aa15.61■□□□□ 0.09
CCDC50-202ENST00000392456 VSIRQ9H7M9 311 aa15.61■□□□□ 0.09
CCDC50-202ENST00000392456 NAA60Q9H7X0 242 aa15.61■□□□□ 0.09
CCDC50-202ENST00000392456 ARFGEF3Q5TH69 2177 aa15.61■□□□□ 0.09
CCDC50-202ENST00000392456 CST7O76096 145 aa15.6■□□□□ 0.09
CCDC50-202ENST00000392456 C12orf54Q6X4T0 127 aa15.6■□□□□ 0.09
CCDC50-202ENST00000392456 LIAT1Q6ZQX7 453 aa15.6■□□□□ 0.09
CCDC50-202ENST00000392456 SSX8Q7RTT4 187 aa15.6■□□□□ 0.09
CCDC50-202ENST00000392456 H0YJW9 148 aa15.6■□□□□ 0.09
CCDC50-202ENST00000392456 TMEM249Q2WGJ8 235 aa15.6■□□□□ 0.09
CCDC50-202ENST00000392456 LINC00596Q86U02 117 aa15.6■□□□□ 0.09
CCDC50-202ENST00000392456 MRPL30Q8TCC3 161 aaKnown RBP15.6■□□□□ 0.09
CCDC50-202ENST00000392456 KCNS1Q96KK3 526 aa15.6■□□□□ 0.09
CCDC50-202ENST00000392456 HIF1ANQ9NWT6 349 aa15.6■□□□□ 0.09
CCDC50-202ENST00000392456 HCFC1P51610 2035 aa15.6■□□□□ 0.09
CCDC50-202ENST00000392456 OR11H12B2RN74 326 aa15.59■□□□□ 0.09
CCDC50-202ENST00000392456 CA2P00918 260 aa15.59■□□□□ 0.09
CCDC50-202ENST00000392456 SCTP09683 121 aa15.59■□□□□ 0.09
CCDC50-202ENST00000392456 ZNF728P0DKX0 622 aa15.59■□□□□ 0.09
CCDC50-202ENST00000392456 PLP1P60201 277 aa15.59■□□□□ 0.09
CCDC50-202ENST00000392456 TNFAIP6P98066 277 aaPredicted RBP15.59■□□□□ 0.09
CCDC50-202ENST00000392456 MTURNQ8N3F0 131 aa15.59■□□□□ 0.09
CCDC50-202ENST00000392456 OR11H1Q8NG94 326 aa15.59■□□□□ 0.09
CCDC50-202ENST00000392456 OR11H2Q8NH07 326 aa15.59■□□□□ 0.09
CCDC50-202ENST00000392456 GNB4Q9HAV0 340 aa15.59■□□□□ 0.09
CCDC50-202ENST00000392456 GCM1Q9NP62 436 aa15.59■□□□□ 0.09
CCDC50-202ENST00000392456 IGHV3OR15-7A0A075B7D8 119 aa15.59■□□□□ 0.09
CCDC50-202ENST00000392456 A0A1W2PS18 150 aa15.59■□□□□ 0.09
CCDC50-202ENST00000392456 PMCHP20382 165 aa15.59■□□□□ 0.09
CCDC50-202ENST00000392456 C19orf35Q6ZS72 473 aa15.59■□□□□ 0.09
CCDC50-202ENST00000392456 ITLN2Q8WWU7 325 aaPredicted RBP15.59■□□□□ 0.09
CCDC50-202ENST00000392456 RTN4IP1Q8WWV3 396 aaPredicted RBP15.59■□□□□ 0.09
CCDC50-202ENST00000392456 NPFFR1Q9GZQ6 430 aa15.59■□□□□ 0.09
CCDC50-202ENST00000392456 CD3EP07766 207 aa15.58■□□□□ 0.09
CCDC50-202ENST00000392456 LCN12Q6JVE5 192 aa15.58■□□□□ 0.09
CCDC50-202ENST00000392456 CCDC71LQ8N9Z2 235 aa15.58■□□□□ 0.09
CCDC50-202ENST00000392456 SGMS2Q8NHU3 365 aa15.58■□□□□ 0.09
CCDC50-202ENST00000392456 TP73-AS1Q9UF72 201 aa15.58■□□□□ 0.09
CCDC50-202ENST00000392456 SS18L2Q9UHA2 77 aa15.58■□□□□ 0.09
CCDC50-202ENST00000392456 AKAP6Q13023 2319 aa15.58■□□□□ 0.08
CCDC50-202ENST00000392456 UTP20O75691 2785 aaKnown RBP15.58■□□□□ 0.08
CCDC50-202ENST00000392456 DEFB108AA8MXU0 73 aa15.58■□□□□ 0.08
CCDC50-202ENST00000392456 SRRM5B3KS81 715 aa15.58■□□□□ 0.08
CCDC50-202ENST00000392456 CLEC3BP05452 202 aa15.58■□□□□ 0.08
CCDC50-202ENST00000392456 STAG3L2P0CL84 134 aa15.58■□□□□ 0.08
CCDC50-202ENST00000392456 GATA2P23769 480 aaPredicted RBP15.58■□□□□ 0.08
CCDC50-202ENST00000392456 CD177Q8N6Q3 437 aa15.58■□□□□ 0.08
CCDC50-202ENST00000392456 OR4A5Q8NH83 315 aa15.58■□□□□ 0.08
CCDC50-202ENST00000392456 MSI2Q96DH6 328 aaKnown RBP15.58■□□□□ 0.08
CCDC50-202ENST00000392456 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.57■□□□□ 0.08
CCDC50-202ENST00000392456 TRBV7-9A0A0J9YWB2 115 aa15.57■□□□□ 0.08
CCDC50-202ENST00000392456 FAM231BA6NCW3 169 aa15.57■□□□□ 0.08
CCDC50-202ENST00000392456 LOXP28300 417 aaPredicted RBP15.57■□□□□ 0.08
CCDC50-202ENST00000392456 RHOBP62745 196 aa15.57■□□□□ 0.08
CCDC50-202ENST00000392456 PSMG3Q9BT73 122 aaPredicted RBP15.57■□□□□ 0.08
CCDC50-202ENST00000392456 CLEC7AQ9BXN2 247 aa15.57■□□□□ 0.08
CCDC50-202ENST00000392456 ZNF286AQ9HBT8 521 aa15.57■□□□□ 0.08
CCDC50-202ENST00000392456 IGKV1-6A0A0C4DH72 117 aa15.57■□□□□ 0.08
CCDC50-202ENST00000392456 GAGE12HA6NDE8 117 aa15.57■□□□□ 0.08
CCDC50-202ENST00000392456 C17orf100A8MU93 164 aa15.57■□□□□ 0.08
CCDC50-202ENST00000392456 MPPED1O15442 326 aa15.57■□□□□ 0.08
CCDC50-202ENST00000392456 ZNF324O75467 553 aaPredicted RBP15.57■□□□□ 0.08
CCDC50-202ENST00000392456 LHBP01229 141 aa15.57■□□□□ 0.08
CCDC50-202ENST00000392456 MZT1Q08AG7 82 aa15.57■□□□□ 0.08
CCDC50-202ENST00000392456 HLA-DRB5Q30154 266 aa15.57■□□□□ 0.08
CCDC50-202ENST00000392456 CD300EQ496F6 205 aaPredicted RBP15.57■□□□□ 0.08
CCDC50-202ENST00000392456 ZNF788Q6ZQV5 615 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms