RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 COLCA1Q6ZS62 124 aa12.44□□□□□ -0.42
SNPH-202ENST00000381873 TNFRSF18Q9Y5U5 241 aa12.44□□□□□ -0.42
SNPH-202ENST00000381873 MYLKQ15746 1914 aa12.44□□□□□ -0.42
SNPH-202ENST00000381873 PEX7O00628 323 aa12.44□□□□□ -0.42
SNPH-202ENST00000381873 NPFFO15130 113 aa12.44□□□□□ -0.42
SNPH-202ENST00000381873 LYPD3O95274 346 aa12.44□□□□□ -0.42
SNPH-202ENST00000381873 TFF3Q07654 80 aa12.44□□□□□ -0.42
SNPH-202ENST00000381873 FOXF2Q12947 444 aa12.44□□□□□ -0.42
SNPH-202ENST00000381873 DMRTA2Q96SC8 542 aa12.44□□□□□ -0.42
SNPH-202ENST00000381873 PI4KAP42356 2102 aa12.44□□□□□ -0.42
SNPH-202ENST00000381873 ZNF319Q9P2F9 582 aa12.44□□□□□ -0.42
SNPH-202ENST00000381873 FOXA3P55318 350 aaPredicted RBP12.43□□□□□ -0.42
SNPH-202ENST00000381873 COPS9Q8WXC6 57 aa12.43□□□□□ -0.42
SNPH-202ENST00000381873 HIST1H4GQ99525 98 aa12.43□□□□□ -0.42
SNPH-202ENST00000381873 PEMTQ9UBM1 199 aa12.43□□□□□ -0.42
SNPH-202ENST00000381873 FAM208BQ5VWN6 2430 aa12.43□□□□□ -0.42
SNPH-202ENST00000381873 PSMB11A5LHX3 300 aa12.43□□□□□ -0.42
SNPH-202ENST00000381873 FREM3P0C091 2139 aa12.43□□□□□ -0.42
SNPH-202ENST00000381873 ZP1P60852 638 aa12.43□□□□□ -0.42
SNPH-202ENST00000381873 TMEM136Q6ZRR5 245 aa12.43□□□□□ -0.42
SNPH-202ENST00000381873 IGKV1D-13A0A0B4J2D9 117 aa12.43□□□□□ -0.42
SNPH-202ENST00000381873 IGKV1-13P0DP09 117 aa12.43□□□□□ -0.42
SNPH-202ENST00000381873 SLC25A34Q6PIV7 304 aa12.43□□□□□ -0.42
SNPH-202ENST00000381873 OR10S1Q8NGN2 331 aa12.43□□□□□ -0.42
SNPH-202ENST00000381873 GPR61Q9BZJ8 451 aa12.43□□□□□ -0.42
SNPH-202ENST00000381873 MPTX1A8MV57 137 aa12.43□□□□□ -0.42
SNPH-202ENST00000381873 GATA2P23769 480 aaPredicted RBP12.43□□□□□ -0.42
SNPH-202ENST00000381873 TBR1Q16650 682 aa12.43□□□□□ -0.42
SNPH-202ENST00000381873 ZNF497Q6ZNH5 498 aa12.43□□□□□ -0.42
SNPH-202ENST00000381873 LYZL4Q96KX0 146 aa12.43□□□□□ -0.42
SNPH-202ENST00000381873 DUX3Q96PT4 197 aa12.43□□□□□ -0.42
SNPH-202ENST00000381873 PLSCR4Q9NRQ2 329 aa12.43□□□□□ -0.42
SNPH-202ENST00000381873 METRNQ9UJH8 293 aa12.43□□□□□ -0.42
SNPH-202ENST00000381873 IGHV1-46P01743 117 aa12.42□□□□□ -0.42
SNPH-202ENST00000381873 PRB3Q04118 309 aaPredicted RBP12.42□□□□□ -0.42
SNPH-202ENST00000381873 SPATA45Q537H7 98 aa12.42□□□□□ -0.42
SNPH-202ENST00000381873 A0A1B0GUT8 65 aa12.42□□□□□ -0.42
SNPH-202ENST00000381873 A0A1W2PRX2 142 aa12.42□□□□□ -0.42
SNPH-202ENST00000381873 EFNA2O43921 213 aa12.42□□□□□ -0.42
SNPH-202ENST00000381873 CD24P25063 80 aa12.42□□□□□ -0.42
SNPH-202ENST00000381873 FOXG1P55316 489 aaPredicted RBP12.42□□□□□ -0.42
SNPH-202ENST00000381873 FAM89BQ8N5H3 189 aa12.42□□□□□ -0.42
SNPH-202ENST00000381873 OTX1P32242 354 aaPredicted RBP12.42□□□□□ -0.42
SNPH-202ENST00000381873 REC114Q7Z4M0 266 aa12.42□□□□□ -0.42
SNPH-202ENST00000381873 UQCR10Q9UDW1 63 aa12.42□□□□□ -0.42
SNPH-202ENST00000381873 CBLN1P23435 193 aa12.42□□□□□ -0.42
SNPH-202ENST00000381873 CIARTQ8N365 385 aaPredicted RBP12.42□□□□□ -0.42
SNPH-202ENST00000381873 FGFBP3Q8TAT2 258 aa12.42□□□□□ -0.42
SNPH-202ENST00000381873 C7orf71A4D174 169 aa12.41□□□□□ -0.42
SNPH-202ENST00000381873 GRIFINA4D1Z8 144 aa12.41□□□□□ -0.42
SNPH-202ENST00000381873 UQCRFS1P47985 274 aa12.41□□□□□ -0.42
SNPH-202ENST00000381873 ZNF525Q8N782 197 aa12.41□□□□□ -0.42
SNPH-202ENST00000381873 OR11H12B2RN74 326 aa12.41□□□□□ -0.42
SNPH-202ENST00000381873 CRYGSP22914 178 aa12.41□□□□□ -0.42
SNPH-202ENST00000381873 COTL1Q14019 142 aa12.41□□□□□ -0.42
SNPH-202ENST00000381873 ZNF672Q499Z4 452 aaPredicted RBP12.41□□□□□ -0.42
SNPH-202ENST00000381873 OR11H1Q8NG94 326 aa12.41□□□□□ -0.42
SNPH-202ENST00000381873 OR11H2Q8NH07 326 aa12.41□□□□□ -0.42
SNPH-202ENST00000381873 KCNS1Q96KK3 526 aa12.41□□□□□ -0.42
SNPH-202ENST00000381873 MST1P26927 711 aa12.41□□□□□ -0.42
SNPH-202ENST00000381873 GGNQ86UU5 652 aa12.41□□□□□ -0.42
SNPH-202ENST00000381873 HEATR1Q9H583 2144 aaKnown RBP12.4□□□□□ -0.42
SNPH-202ENST00000381873 BIVMQ86UB2 503 aa12.4□□□□□ -0.42
SNPH-202ENST00000381873 TNFRSF14Q92956 283 aa12.4□□□□□ -0.42
SNPH-202ENST00000381873 LINC01587Q99440 93 aa12.4□□□□□ -0.42
SNPH-202ENST00000381873 C15orf61A6NNL5 157 aa12.4□□□□□ -0.42
SNPH-202ENST00000381873 SRRM5B3KS81 715 aa12.4□□□□□ -0.42
SNPH-202ENST00000381873 ZNF600Q6ZNG1 722 aa12.4□□□□□ -0.42
SNPH-202ENST00000381873 MIR17HGQ75NE6 70 aa12.4□□□□□ -0.42
SNPH-202ENST00000381873 C8orf46Q8TAG6 207 aa12.4□□□□□ -0.42
SNPH-202ENST00000381873 DOCK8Q8NF50 2099 aa12.4□□□□□ -0.42
SNPH-202ENST00000381873 PRR32B1ATL7 298 aa12.4□□□□□ -0.42
SNPH-202ENST00000381873 TIMM23O14925 209 aa12.4□□□□□ -0.42
SNPH-202ENST00000381873 FABP2P12104 132 aa12.4□□□□□ -0.42
SNPH-202ENST00000381873 TAS2R60P59551 318 aa12.4□□□□□ -0.42
SNPH-202ENST00000381873 RHOGP84095 191 aa12.4□□□□□ -0.42
SNPH-202ENST00000381873 NR2C2APQ86WQ0 139 aa12.4□□□□□ -0.42
SNPH-202ENST00000381873 TMEM101Q96IK0 257 aa12.4□□□□□ -0.42
SNPH-202ENST00000381873 K7ERU9 68 aa12.4□□□□□ -0.42
SNPH-202ENST00000381873 HINT1P49773 126 aaPredicted RBP12.4□□□□□ -0.42
SNPH-202ENST00000381873 PVRIGQ6DKI7 326 aa12.4□□□□□ -0.42
SNPH-202ENST00000381873 PRELID3AQ96N28 172 aa12.4□□□□□ -0.42
SNPH-202ENST00000381873 PTPRQQ9UMZ3 2332 aa12.39□□□□□ -0.43
SNPH-202ENST00000381873 VDAC2P45880 294 aaPredicted RBP12.39□□□□□ -0.43
SNPH-202ENST00000381873 ZNF385CQ66K41 422 aaPredicted RBP12.39□□□□□ -0.43
SNPH-202ENST00000381873 ARL6IP6Q8N6S5 226 aa12.39□□□□□ -0.43
SNPH-202ENST00000381873 TMEM170BQ5T4T1 132 aa12.39□□□□□ -0.43
SNPH-202ENST00000381873 Q6AWC8 147 aa12.39□□□□□ -0.43
SNPH-202ENST00000381873 TRGV2A0A075B6R0 118 aa12.39□□□□□ -0.43
SNPH-202ENST00000381873 LRTM2Q8N967 370 aa12.39□□□□□ -0.43
SNPH-202ENST00000381873 RNF125Q96EQ8 232 aa12.39□□□□□ -0.43
SNPH-202ENST00000381873 RPUSD1Q9UJJ7 312 aaKnown RBP12.39□□□□□ -0.43
SNPH-202ENST00000381873 ACACBO00763 2458 aa12.39□□□□□ -0.43
SNPH-202ENST00000381873 SCO2A0A1W2PP80 73 aa12.39□□□□□ -0.43
SNPH-202ENST00000381873 GAGE10A6NGK3 116 aa12.39□□□□□ -0.43
SNPH-202ENST00000381873 TFF1P04155 84 aa12.39□□□□□ -0.43
SNPH-202ENST00000381873 DUTP33316 252 aaKnown RBP12.39□□□□□ -0.43
SNPH-202ENST00000381873 EFNA4P52798 201 aa12.39□□□□□ -0.43
SNPH-202ENST00000381873 SLC50A1Q9BRV3 221 aa12.39□□□□□ -0.43
SNPH-202ENST00000381873 Q9H3A6 140 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms