RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 ADIRFQ15847 76 aa5.63□□□□□ -1.51
CSDE1-204ENST00000369530 TMEM252Q8N6L7 170 aa5.63□□□□□ -1.51
CSDE1-204ENST00000369530 SCCPDHQ8NBX0 429 aa5.63□□□□□ -1.51
CSDE1-204ENST00000369530 GNG13Q9P2W3 67 aa5.63□□□□□ -1.51
CSDE1-204ENST00000369530 HYDINQ4G0P3 5121 aa5.63□□□□□ -1.51
CSDE1-204ENST00000369530 DOPEY2Q9Y3R5 2298 aa5.63□□□□□ -1.51
CSDE1-204ENST00000369530 TRAV38-1A0A0B4J264 116 aa5.63□□□□□ -1.51
CSDE1-204ENST00000369530 A0A1W2PS18 150 aa5.63□□□□□ -1.51
CSDE1-204ENST00000369530 C9orf118A6NHY6 69 aa5.63□□□□□ -1.51
CSDE1-204ENST00000369530 SH2D1BO14796 132 aa5.63□□□□□ -1.51
CSDE1-204ENST00000369530 CELA3BP08861 270 aa5.63□□□□□ -1.51
CSDE1-204ENST00000369530 AMY2BP19961 511 aa5.63□□□□□ -1.51
CSDE1-204ENST00000369530 CD40P25942 277 aa5.63□□□□□ -1.51
CSDE1-204ENST00000369530 GPM6AP51674 278 aa5.63□□□□□ -1.51
CSDE1-204ENST00000369530 LOXL1Q08397 574 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-204ENST00000369530 KISS1Q15726 138 aa5.63□□□□□ -1.51
CSDE1-204ENST00000369530 SPRNQ5BIV9 151 aa5.63□□□□□ -1.51
CSDE1-204ENST00000369530 FAM27BQ5VT28 67 aa5.63□□□□□ -1.51
CSDE1-204ENST00000369530 OR10P1Q8NGE3 313 aa5.63□□□□□ -1.51
CSDE1-204ENST00000369530 KCNG3Q8TAE7 436 aa5.63□□□□□ -1.51
CSDE1-204ENST00000369530 LINC01560Q8TB33 94 aa5.63□□□□□ -1.51
CSDE1-204ENST00000369530 WIPF2Q8TF74 440 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-204ENST00000369530 VPS13DQ5THJ4 4388 aa5.63□□□□□ -1.51
CSDE1-204ENST00000369530 CACNA1DQ01668 2161 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 PRR14LQ5THK1 2151 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 F2RL2O00254 374 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 ZNF324O75467 553 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-204ENST00000369530 HAND1O96004 215 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 LHBP01229 141 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 MT-ND6P03923 174 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 MRPS34P82930 218 aaKnown RBP5.62□□□□□ -1.51
CSDE1-204ENST00000369530 RNF144BQ7Z419 303 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 BOD1L2Q8IYS8 172 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 ZNF665Q9H7R5 613 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 CADP27708 2225 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 C16orf97H3BN30 126 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 M0R1X1 148 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 HSPB6O14558 160 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 CA2P00918 260 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 SSTR5P35346 364 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 PSG4Q00888 419 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 HIST1H1AQ02539 215 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-204ENST00000369530 MALLQ13021 153 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 SLC35E4Q6ICL7 350 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 BRICD5Q6PL45 260 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 C18orf32Q8TCD1 76 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 PMCHL2Q9BQD1 86 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 SIGLEC8Q9NYZ4 499 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 PSG8Q9UQ74 426 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 FASNP49327 2511 aaKnown RBP5.62□□□□□ -1.51
CSDE1-204ENST00000369530 SPTAN1Q13813 2472 aaKnown RBP5.62□□□□□ -1.51
CSDE1-204ENST00000369530 DNAH2Q9P225 4427 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 GAGE12HA6NDE8 117 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 SDCBPO00560 298 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-204ENST00000369530 RAD51DO75771 328 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 DHRS3O75911 302 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 IGLL1P15814 213 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 TMEM50BP56557 158 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 BSPH1Q075Z2 132 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 STUMQ69YW2 141 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 Q6ZR03 302 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 C11orf53Q8IXP5 236 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 OR5AS1Q8N127 324 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 LGI3Q8N145 548 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 OR10V1Q8NGI7 309 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 ZNF418Q8TF45 676 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-204ENST00000369530 RAB1CQ92928 201 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 C1QTNF5Q9BXJ0 243 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 TMEM133Q9H2Q1 129 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 GEMIN7Q9H840 131 aaKnown RBP5.62□□□□□ -1.51
CSDE1-204ENST00000369530 MRPL16Q9NX20 251 aaKnown RBP5.62□□□□□ -1.51
CSDE1-204ENST00000369530 IL36GQ9NZH8 169 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 ERG28Q9UKR5 140 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 LY96Q9Y6Y9 160 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 ALMS1Q8TCU4 4167 aa5.62□□□□□ -1.51
CSDE1-204ENST00000369530 DYSFO75923 2080 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 DEGS1O15121 323 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 SOCS1O15524 211 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 OR7C1O76099 320 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-204ENST00000369530 PI3P19957 117 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 ID3Q02535 119 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 LRP11Q86VZ4 500 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 C10orf105Q8TEF2 133 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 SPANXA1Q9NS26 97 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 ANKRD30BLA7E2S9 258 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 CECR9P0C854 216 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 CRYBB3P26998 211 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 MPV17L2Q567V2 206 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 C1orf229Q6ZS94 237 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-204ENST00000369530 NANOS1Q8WY41 292 aaKnown RBP5.61□□□□□ -1.51
CSDE1-204ENST00000369530 ARHGAP5-AS1Q96IT6 56 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 RPRMQ9NS64 109 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 A0A0U1RQK1 487 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 GAGE10A6NGK3 116 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 ZNF850A8MQ14 1090 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 LYZL6O75951 148 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 SLC25A6P12236 298 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 NPY1RP25929 384 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 GATA4P43694 442 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 ZNF83P51522 516 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms