RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 THBDP07204 575 aa11.81□□□□□ -0.52
TDP2-201ENST00000341060 PPIAL4FP0DN26 164 aa11.81□□□□□ -0.52
TDP2-201ENST00000341060 USF1P22415 310 aaPredicted RBP11.81□□□□□ -0.52
TDP2-201ENST00000341060 CHRNB4P30926 498 aa11.81□□□□□ -0.52
TDP2-201ENST00000341060 ADMP35318 185 aa11.81□□□□□ -0.52
TDP2-201ENST00000341060 ZNF90Q03938 601 aa11.81□□□□□ -0.52
TDP2-201ENST00000341060 FAM71F2Q6NXP2 309 aa11.81□□□□□ -0.52
TDP2-201ENST00000341060 OR4C13Q8NGP0 309 aa11.81□□□□□ -0.52
TDP2-201ENST00000341060 OR9G1Q8NH87 305 aa11.81□□□□□ -0.52
TDP2-201ENST00000341060 PPIAL4AQ9Y536 164 aa11.81□□□□□ -0.52
TDP2-201ENST00000341060 A0A087X0M5 115 aa11.81□□□□□ -0.52
TDP2-201ENST00000341060 A0A1B0GX30 115 aa11.81□□□□□ -0.52
TDP2-201ENST00000341060 HELTA6NFD8 242 aa11.81□□□□□ -0.52
TDP2-201ENST00000341060 SLC17A3O00476 420 aa11.81□□□□□ -0.52
TDP2-201ENST00000341060 OR7C2O60412 319 aa11.81□□□□□ -0.52
TDP2-201ENST00000341060 GNG4P50150 75 aa11.81□□□□□ -0.52
TDP2-201ENST00000341060 MLANAQ16655 118 aa11.81□□□□□ -0.52
TDP2-201ENST00000341060 MRPL41Q8IXM3 137 aaKnown RBP11.81□□□□□ -0.52
TDP2-201ENST00000341060 ZNF596Q8TC21 504 aa11.81□□□□□ -0.52
TDP2-201ENST00000341060 FLYWCH2Q96CP2 140 aaKnown RBP11.81□□□□□ -0.52
TDP2-201ENST00000341060 ADGRG4Q8IZF6 3080 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 PTPRQQ9UMZ3 2332 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 CRYBB3P26998 211 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 SELENOTP62341 195 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 ERHP84090 104 aaKnown RBP11.8□□□□□ -0.52
TDP2-201ENST00000341060 RPEL1Q2QD12 228 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 CENPWQ5EE01 88 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 SSX8Q7RTT4 187 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 PDPNQ86YL7 162 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 C8orf31Q8N9H6 132 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 OR4A5Q8NH83 315 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 VSTM2AQ8TAG5 236 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 TMEM167AQ8TBQ9 72 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 TMEM186Q96B77 213 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 SLC25A33Q9BSK2 321 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 MRPL32Q9BYC8 188 aaKnown RBP11.8□□□□□ -0.52
TDP2-201ENST00000341060 JKAMPQ9P055 326 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 SSUH2Q9Y2M2 353 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 KALRNO60229 2985 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 A0A1W2PRE2 83 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 PSMB11A5LHX3 300 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 GGTLC3B5MD39 225 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 E7EUB6 86 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 TNFRSF13BO14836 293 aaPredicted RBP11.8□□□□□ -0.52
TDP2-201ENST00000341060 OR10J4P0C629 311 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 REG1BP48304 166 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 LGALS4P56470 323 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 ERVFC1-1P60608 527 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 REC114Q7Z4M0 266 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 ZNF664Q8N3J9 261 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 LINC00311Q8N616 119 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 LINC00469Q8N7U9 141 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 OR10X1Q8NGY0 326 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 RAXQ9Y2V3 346 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 V9GYV3 84 aa11.8□□□□□ -0.52
TDP2-201ENST00000341060 PKDREJQ9NTG1 2253 aa11.79□□□□□ -0.52
TDP2-201ENST00000341060 A0A1W2PN81 502 aa11.79□□□□□ -0.52
TDP2-201ENST00000341060 ZNF705GA8MUZ8 300 aaPredicted RBP11.79□□□□□ -0.52
TDP2-201ENST00000341060 C8orf88P0DMB2 117 aa11.79□□□□□ -0.52
TDP2-201ENST00000341060 LRRC10Q5BKY1 277 aa11.79□□□□□ -0.52
TDP2-201ENST00000341060 UNQ6494/PRO21346Q6UXR6 183 aa11.79□□□□□ -0.52
TDP2-201ENST00000341060 TMEM256Q8N2U0 113 aa11.79□□□□□ -0.52
TDP2-201ENST00000341060 H1FXQ92522 213 aaKnown RBP11.79□□□□□ -0.52
TDP2-201ENST00000341060 CCL17Q92583 94 aa11.79□□□□□ -0.52
TDP2-201ENST00000341060 TMEM106BQ9NUM4 274 aa11.79□□□□□ -0.52
TDP2-201ENST00000341060 A0A1B0GUS0 222 aa11.78□□□□□ -0.52
TDP2-201ENST00000341060 NDUFB3O43676 98 aa11.78□□□□□ -0.52
TDP2-201ENST00000341060 CBLN1P23435 193 aa11.78□□□□□ -0.52
TDP2-201ENST00000341060 OR5I1Q13606 314 aa11.78□□□□□ -0.52
TDP2-201ENST00000341060 IQCJQ1A5X6 159 aa11.78□□□□□ -0.52
TDP2-201ENST00000341060 MMD2Q8IY49 270 aa11.78□□□□□ -0.52
TDP2-201ENST00000341060 ST6GALNAC6Q969X2 333 aa11.78□□□□□ -0.52
TDP2-201ENST00000341060 ABHD17AQ96GS6 310 aa11.78□□□□□ -0.52
TDP2-201ENST00000341060 NOL4LQ96MY1 436 aaPredicted RBP11.78□□□□□ -0.52
TDP2-201ENST00000341060 RNF2Q99496 336 aa11.78□□□□□ -0.52
TDP2-201ENST00000341060 PLXNB1O43157 2135 aa11.78□□□□□ -0.52
TDP2-201ENST00000341060 CGB1A6NKQ9 187 aa11.78□□□□□ -0.52
TDP2-201ENST00000341060 A8MWP6 167 aa11.78□□□□□ -0.52
TDP2-201ENST00000341060 ZNF137PP52743 207 aa11.78□□□□□ -0.52
TDP2-201ENST00000341060 WT1-ASQ06250 92 aa11.78□□□□□ -0.52
TDP2-201ENST00000341060 DIAPH2-AS1Q14236 149 aa11.78□□□□□ -0.52
TDP2-201ENST00000341060 LYPD2Q6UXB3 125 aa11.78□□□□□ -0.52
TDP2-201ENST00000341060 WFIKKN1Q96NZ8 548 aa11.78□□□□□ -0.52
TDP2-201ENST00000341060 IGLV2-23P01705 113 aa11.77□□□□□ -0.52
TDP2-201ENST00000341060 SSX2Q16385 188 aa11.77□□□□□ -0.52
TDP2-201ENST00000341060 Q8NA96 180 aa11.77□□□□□ -0.52
TDP2-201ENST00000341060 OR2T6Q8NHC8 308 aa11.77□□□□□ -0.52
TDP2-201ENST00000341060 RNASE6Q93091 150 aaKnown RBP11.77□□□□□ -0.52
TDP2-201ENST00000341060 MRPL18Q9H0U6 180 aaKnown RBP11.77□□□□□ -0.52
TDP2-201ENST00000341060 CTSZQ9UBR2 303 aa11.77□□□□□ -0.52
TDP2-201ENST00000341060 WASHC3Q9Y3C0 194 aa11.77□□□□□ -0.52
TDP2-201ENST00000341060 K7ENP7 123 aa11.77□□□□□ -0.53
TDP2-201ENST00000341060 NUPR1O60356 82 aa11.77□□□□□ -0.53
TDP2-201ENST00000341060 LOXP28300 417 aaPredicted RBP11.77□□□□□ -0.53
TDP2-201ENST00000341060 SUMO1P63165 101 aaKnown RBP11.77□□□□□ -0.53
TDP2-201ENST00000341060 TIGITQ495A1 244 aa11.77□□□□□ -0.53
TDP2-201ENST00000341060 MORN5Q5VZ52 161 aa11.77□□□□□ -0.53
TDP2-201ENST00000341060 FAM167A-AS1Q96KT0 104 aa11.77□□□□□ -0.53
TDP2-201ENST00000341060 SLC25A2Q9BXI2 301 aa11.77□□□□□ -0.53
TDP2-201ENST00000341060 FNDC4Q9H6D8 234 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms