RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 RNASE2P10153 161 aaKnown RBP12.82□□□□□ -0.36
NCKIPSD-201ENST00000294129 SSBP2P81877 361 aaPredicted RBP12.82□□□□□ -0.36
NCKIPSD-201ENST00000294129 SGMS2Q8NHU3 365 aa12.82□□□□□ -0.36
NCKIPSD-201ENST00000294129 ZNF257Q9Y2Q1 563 aa12.82□□□□□ -0.36
NCKIPSD-201ENST00000294129 AMBPP02760 352 aa12.82□□□□□ -0.36
NCKIPSD-201ENST00000294129 LOXP28300 417 aaPredicted RBP12.82□□□□□ -0.36
NCKIPSD-201ENST00000294129 PRR20EP86478 221 aa12.82□□□□□ -0.36
NCKIPSD-201ENST00000294129 PRR20CP86479 221 aa12.82□□□□□ -0.36
NCKIPSD-201ENST00000294129 PRR20DP86480 221 aa12.82□□□□□ -0.36
NCKIPSD-201ENST00000294129 PRR20BP86481 221 aa12.82□□□□□ -0.36
NCKIPSD-201ENST00000294129 PRR20AP86496 221 aa12.82□□□□□ -0.36
NCKIPSD-201ENST00000294129 KCNIP4Q6PIL6 250 aa12.82□□□□□ -0.36
NCKIPSD-201ENST00000294129 REC114Q7Z4M0 266 aa12.82□□□□□ -0.36
NCKIPSD-201ENST00000294129 DMRTC2Q8IXT2 367 aaPredicted RBP12.82□□□□□ -0.36
NCKIPSD-201ENST00000294129 TMEM183AQ8IXX5 376 aa12.82□□□□□ -0.36
NCKIPSD-201ENST00000294129 SFRP2Q96HF1 295 aa12.82□□□□□ -0.36
NCKIPSD-201ENST00000294129 BET1LQ9NYM9 111 aa12.82□□□□□ -0.36
NCKIPSD-201ENST00000294129 SLC17A3O00476 420 aa12.81□□□□□ -0.36
NCKIPSD-201ENST00000294129 TGOLN2O43493 480 aa12.81□□□□□ -0.36
NCKIPSD-201ENST00000294129 IL3RAP26951 378 aa12.81□□□□□ -0.36
NCKIPSD-201ENST00000294129 OSR1Q8TAX0 266 aaPredicted RBP12.81□□□□□ -0.36
NCKIPSD-201ENST00000294129 NGBQ9NPG2 151 aa12.81□□□□□ -0.36
NCKIPSD-201ENST00000294129 JKAMPQ9P055 326 aa12.81□□□□□ -0.36
NCKIPSD-201ENST00000294129 SLC45A2Q9UMX9 530 aa12.81□□□□□ -0.36
NCKIPSD-201ENST00000294129 IGHV1-69-2A0A0G2JMI3 117 aa12.81□□□□□ -0.36
NCKIPSD-201ENST00000294129 ZNF705GA8MUZ8 300 aaPredicted RBP12.81□□□□□ -0.36
NCKIPSD-201ENST00000294129 GZMBP10144 247 aa12.81□□□□□ -0.36
NCKIPSD-201ENST00000294129 C19orf35Q6ZS72 473 aa12.81□□□□□ -0.36
NCKIPSD-201ENST00000294129 LHFPL4Q7Z7J7 247 aa12.81□□□□□ -0.36
NCKIPSD-201ENST00000294129 TGIF2LXQ8IUE1 241 aa12.81□□□□□ -0.36
NCKIPSD-201ENST00000294129 OR5B3Q8NH48 314 aa12.81□□□□□ -0.36
NCKIPSD-201ENST00000294129 FKBP11Q9NYL4 201 aa12.81□□□□□ -0.36
NCKIPSD-201ENST00000294129 SVEP1Q4LDE5 3571 aa12.81□□□□□ -0.36
NCKIPSD-201ENST00000294129 IGHV3-21A0A0B4J1V1 117 aa12.81□□□□□ -0.36
NCKIPSD-201ENST00000294129 LY6HO94772 140 aa12.81□□□□□ -0.36
NCKIPSD-201ENST00000294129 ERHP84090 104 aaKnown RBP12.81□□□□□ -0.36
NCKIPSD-201ENST00000294129 RBPJQ06330 500 aa12.81□□□□□ -0.36
NCKIPSD-201ENST00000294129 OR5I1Q13606 314 aa12.81□□□□□ -0.36
NCKIPSD-201ENST00000294129 TMEM144Q7Z5S9 345 aa12.81□□□□□ -0.36
NCKIPSD-201ENST00000294129 OR1L8Q8NGR8 309 aa12.81□□□□□ -0.36
NCKIPSD-201ENST00000294129 ZNF430Q9H8G1 570 aaPredicted RBP12.81□□□□□ -0.36
NCKIPSD-201ENST00000294129 TRAV5A0A0B4J249 113 aa12.8□□□□□ -0.36
NCKIPSD-201ENST00000294129 K7ENP7 123 aa12.8□□□□□ -0.36
NCKIPSD-201ENST00000294129 CRYBB3P26998 211 aa12.8□□□□□ -0.36
NCKIPSD-201ENST00000294129 HLA-DRB5Q30154 266 aa12.8□□□□□ -0.36
NCKIPSD-201ENST00000294129 OR5AN1Q8NGI8 311 aa12.8□□□□□ -0.36
NCKIPSD-201ENST00000294129 OR4C13Q8NGP0 309 aa12.8□□□□□ -0.36
NCKIPSD-201ENST00000294129 OR1P1Q8NH06 330 aa12.8□□□□□ -0.36
NCKIPSD-201ENST00000294129 ZNF835Q9Y2P0 537 aa12.8□□□□□ -0.36
NCKIPSD-201ENST00000294129 LGALS4P56470 323 aa12.8□□□□□ -0.36
NCKIPSD-201ENST00000294129 WT1-ASQ06250 92 aa12.8□□□□□ -0.36
NCKIPSD-201ENST00000294129 MORN5Q5VZ52 161 aa12.8□□□□□ -0.36
NCKIPSD-201ENST00000294129 HCP5Q6MZN7 132 aa12.8□□□□□ -0.36
NCKIPSD-201ENST00000294129 PYGO2Q9BRQ0 406 aa12.8□□□□□ -0.36
NCKIPSD-201ENST00000294129 MT-CO2P00403 227 aa12.79□□□□□ -0.36
NCKIPSD-201ENST00000294129 CD3EP07766 207 aa12.79□□□□□ -0.36
NCKIPSD-201ENST00000294129 COX7A1P24310 79 aa12.79□□□□□ -0.36
NCKIPSD-201ENST00000294129 JOSD1Q15040 202 aaPredicted RBP12.79□□□□□ -0.36
NCKIPSD-201ENST00000294129 ASPHD1Q5U4P2 390 aa12.79□□□□□ -0.36
NCKIPSD-201ENST00000294129 UHRF2Q96PU4 802 aa12.79□□□□□ -0.36
NCKIPSD-201ENST00000294129 RALYQ9UKM9 306 aaKnown RBP12.79□□□□□ -0.36
NCKIPSD-201ENST00000294129 A0A1B0GUS0 222 aa12.79□□□□□ -0.36
NCKIPSD-201ENST00000294129 CD69Q07108 199 aa12.79□□□□□ -0.36
NCKIPSD-201ENST00000294129 C2orf83Q53S99 150 aa12.79□□□□□ -0.36
NCKIPSD-201ENST00000294129 SLC35E1Q96K37 410 aa12.79□□□□□ -0.36
NCKIPSD-201ENST00000294129 NDUFA4L2Q9NRX3 87 aa12.79□□□□□ -0.36
NCKIPSD-201ENST00000294129 K7EN84 100 aa12.78□□□□□ -0.36
NCKIPSD-201ENST00000294129 SPINK4O60575 86 aa12.78□□□□□ -0.36
NCKIPSD-201ENST00000294129 SRP14P37108 136 aaKnown RBP12.78□□□□□ -0.36
NCKIPSD-201ENST00000294129 TMEM30BQ3MIR4 351 aa12.78□□□□□ -0.36
NCKIPSD-201ENST00000294129 ZNF664Q8N3J9 261 aa12.78□□□□□ -0.36
NCKIPSD-201ENST00000294129 NPIPB3Q92617 1050 aa12.78□□□□□ -0.36
NCKIPSD-201ENST00000294129 MISP3Q96FF7 219 aa12.78□□□□□ -0.36
NCKIPSD-201ENST00000294129 WASHC3Q9Y3C0 194 aa12.78□□□□□ -0.36
NCKIPSD-201ENST00000294129 GGCTO75223 188 aaKnown RBP12.78□□□□□ -0.36
NCKIPSD-201ENST00000294129 CNTFRP26992 372 aa12.78□□□□□ -0.36
NCKIPSD-201ENST00000294129 TMEM249Q2WGJ8 235 aa12.78□□□□□ -0.36
NCKIPSD-201ENST00000294129 OR10G8Q8NGN5 311 aa12.78□□□□□ -0.36
NCKIPSD-201ENST00000294129 OR5R1Q8NH85 324 aa12.78□□□□□ -0.36
NCKIPSD-201ENST00000294129 CACNA1BQ00975 2339 aa12.78□□□□□ -0.36
NCKIPSD-201ENST00000294129 IGHV1-8P0DP01 117 aa12.78□□□□□ -0.36
NCKIPSD-201ENST00000294129 USF1P22415 310 aaPredicted RBP12.78□□□□□ -0.36
NCKIPSD-201ENST00000294129 SUMO1P63165 101 aaKnown RBP12.78□□□□□ -0.36
NCKIPSD-201ENST00000294129 ZNF90Q03938 601 aa12.78□□□□□ -0.36
NCKIPSD-201ENST00000294129 USF2Q15853 346 aaPredicted RBP12.78□□□□□ -0.36
NCKIPSD-201ENST00000294129 IGFBPL1Q8WX77 278 aa12.78□□□□□ -0.36
NCKIPSD-201ENST00000294129 TRAPPC1Q9Y5R8 145 aa12.78□□□□□ -0.36
NCKIPSD-201ENST00000294129 APOBEC3AP31941 199 aaPredicted RBP12.77□□□□□ -0.36
NCKIPSD-201ENST00000294129 TMEM177Q53S58 311 aa12.77□□□□□ -0.36
NCKIPSD-201ENST00000294129 TEX38Q6PEX7 206 aa12.77□□□□□ -0.36
NCKIPSD-201ENST00000294129 ZNF503Q96F45 646 aa12.77□□□□□ -0.36
NCKIPSD-201ENST00000294129 FNDC4Q9H6D8 234 aaPredicted RBP12.77□□□□□ -0.36
NCKIPSD-201ENST00000294129 CGB1A6NKQ9 187 aa12.77□□□□□ -0.37
NCKIPSD-201ENST00000294129 DLL1O00548 723 aa12.77□□□□□ -0.37
NCKIPSD-201ENST00000294129 DNLZQ5SXM8 178 aa12.77□□□□□ -0.37
NCKIPSD-201ENST00000294129 NHLRC2Q8NBF2 726 aa12.77□□□□□ -0.37
NCKIPSD-201ENST00000294129 TMEM186Q96B77 213 aa12.77□□□□□ -0.37
NCKIPSD-201ENST00000294129 TECRQ9NZ01 308 aaKnown RBP12.77□□□□□ -0.37
NCKIPSD-201ENST00000294129 MRPL36Q9P0J6 103 aaKnown RBP12.77□□□□□ -0.37
NCKIPSD-201ENST00000294129 ERVFC1-1P60608 527 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms