RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 YPEL2Q96QA6 119 aa13.72□□□□□ -0.21
SQLE-201ENST00000265896 ZNF355PQ9NSJ1 428 aa13.72□□□□□ -0.21
SQLE-201ENST00000265896 RAB31Q13636 194 aa13.71□□□□□ -0.21
SQLE-201ENST00000265896 M0QZ24 198 aa13.71□□□□□ -0.21
SQLE-201ENST00000265896 MPDU1O75352 247 aa13.71□□□□□ -0.21
SQLE-201ENST00000265896 DNLZQ5SXM8 178 aa13.71□□□□□ -0.21
SQLE-201ENST00000265896 ZNF474Q6S9Z5 364 aaPredicted RBP13.71□□□□□ -0.21
SQLE-201ENST00000265896 BEND2Q8NDZ0 799 aa13.71□□□□□ -0.21
SQLE-201ENST00000265896 BLNKQ8WV28 456 aa13.71□□□□□ -0.21
SQLE-201ENST00000265896 DDB2Q92466 427 aa13.71□□□□□ -0.21
SQLE-201ENST00000265896 KLF3P57682 345 aaPredicted RBP13.71□□□□□ -0.22
SQLE-201ENST00000265896 MMDQ15546 238 aa13.71□□□□□ -0.22
SQLE-201ENST00000265896 RUSC1-AS1Q66K80 236 aa13.71□□□□□ -0.22
SQLE-201ENST00000265896 ERASQ7Z444 233 aa13.71□□□□□ -0.22
SQLE-201ENST00000265896 SLC35D1Q9NTN3 355 aa13.71□□□□□ -0.22
SQLE-201ENST00000265896 CD99P14209 185 aa13.7□□□□□ -0.22
SQLE-201ENST00000265896 YPEL3P61236 119 aaPredicted RBP13.7□□□□□ -0.22
SQLE-201ENST00000265896 SPTBN1Q01082 2364 aaKnown RBP13.7□□□□□ -0.22
SQLE-201ENST00000265896 J3QW42 95 aa13.7□□□□□ -0.22
SQLE-201ENST00000265896 SAA1P0DJI8 122 aaPredicted RBP13.7□□□□□ -0.22
SQLE-201ENST00000265896 CT45A6P0DMU7 189 aa13.7□□□□□ -0.22
SQLE-201ENST00000265896 CT45A5P0DMU8 189 aa13.7□□□□□ -0.22
SQLE-201ENST00000265896 CT45A7P0DMV0 189 aa13.7□□□□□ -0.22
SQLE-201ENST00000265896 PMCHL1Q16048 86 aa13.7□□□□□ -0.22
SQLE-201ENST00000265896 C21orf62-AS1Q17RA5 79 aa13.7□□□□□ -0.22
SQLE-201ENST00000265896 IGFBPL1Q8WX77 278 aa13.7□□□□□ -0.22
SQLE-201ENST00000265896 TUBG2Q9NRH3 451 aa13.7□□□□□ -0.22
SQLE-201ENST00000265896 TRGV10A0A0A0MS01 117 aa13.69□□□□□ -0.22
SQLE-201ENST00000265896 KBTBD11-OT1A0A1B0GTJ5 212 aa13.69□□□□□ -0.22
SQLE-201ENST00000265896 DIRC3C9JPN6 131 aa13.69□□□□□ -0.22
SQLE-201ENST00000265896 CORTO00230 105 aa13.69□□□□□ -0.22
SQLE-201ENST00000265896 LEMD1Q68G75 181 aa13.69□□□□□ -0.22
SQLE-201ENST00000265896 TMEM14BQ9NUH8 114 aa13.69□□□□□ -0.22
SQLE-201ENST00000265896 SPTAN1Q13813 2472 aaKnown RBP13.69□□□□□ -0.22
SQLE-201ENST00000265896 TEX50A0A1B0GTY4 177 aa13.69□□□□□ -0.22
SQLE-201ENST00000265896 UBE2L3P68036 154 aaKnown RBP13.69□□□□□ -0.22
SQLE-201ENST00000265896 TIGITQ495A1 244 aa13.69□□□□□ -0.22
SQLE-201ENST00000265896 PPP1R35Q8TAP8 253 aa13.69□□□□□ -0.22
SQLE-201ENST00000265896 H1FXQ92522 213 aaKnown RBP13.69□□□□□ -0.22
SQLE-201ENST00000265896 MRPL20Q9BYC9 149 aaKnown RBP13.69□□□□□ -0.22
SQLE-201ENST00000265896 MRPL36Q9P0J6 103 aaKnown RBP13.69□□□□□ -0.22
SQLE-201ENST00000265896 SLC25A15Q9Y619 301 aa13.69□□□□□ -0.22
SQLE-201ENST00000265896 KIR2DL5BA0A0G2JN68 375 aa13.68□□□□□ -0.22
SQLE-201ENST00000265896 KIR2DL5BA0A0G2JPC4 375 aa13.68□□□□□ -0.22
SQLE-201ENST00000265896 PRR33A8MZF0 331 aa13.68□□□□□ -0.22
SQLE-201ENST00000265896 OR5G3P0C626 314 aa13.68□□□□□ -0.22
SQLE-201ENST00000265896 RANP62826 216 aaKnown RBP13.68□□□□□ -0.22
SQLE-201ENST00000265896 PRR20EP86478 221 aa13.68□□□□□ -0.22
SQLE-201ENST00000265896 PRR20CP86479 221 aa13.68□□□□□ -0.22
SQLE-201ENST00000265896 PRR20DP86480 221 aa13.68□□□□□ -0.22
SQLE-201ENST00000265896 PRR20BP86481 221 aa13.68□□□□□ -0.22
SQLE-201ENST00000265896 PRR20AP86496 221 aa13.68□□□□□ -0.22
SQLE-201ENST00000265896 SLAQ13239 276 aa13.68□□□□□ -0.22
SQLE-201ENST00000265896 IBA57Q5T440 356 aaKnown RBP13.68□□□□□ -0.22
SQLE-201ENST00000265896 KIR2DL5AQ8N109 375 aa13.68□□□□□ -0.22
SQLE-201ENST00000265896 GSX1Q9H4S2 264 aaPredicted RBP13.68□□□□□ -0.22
SQLE-201ENST00000265896 NRN1Q9NPD7 142 aa13.68□□□□□ -0.22
SQLE-201ENST00000265896 K7EM74 188 aa13.68□□□□□ -0.22
SQLE-201ENST00000265896 RAB4AP20338 218 aa13.68□□□□□ -0.22
SQLE-201ENST00000265896 TNFAIP6P98066 277 aaPredicted RBP13.68□□□□□ -0.22
SQLE-201ENST00000265896 HCP5Q6MZN7 132 aa13.68□□□□□ -0.22
SQLE-201ENST00000265896 TRAT1Q6PIZ9 186 aa13.68□□□□□ -0.22
SQLE-201ENST00000265896 TMEM208Q9BTX3 173 aa13.68□□□□□ -0.22
SQLE-201ENST00000265896 ATRXP46100 2492 aa13.68□□□□□ -0.22
SQLE-201ENST00000265896 MOSP00540 346 aa13.68□□□□□ -0.22
SQLE-201ENST00000265896 COMPP49747 757 aaPredicted RBP13.68□□□□□ -0.22
SQLE-201ENST00000265896 TCTEX1D1Q8N7M0 179 aa13.68□□□□□ -0.22
SQLE-201ENST00000265896 MCRIP2Q9BUT9 160 aaKnown RBP13.68□□□□□ -0.22
SQLE-201ENST00000265896 TPSG1Q9NRR2 321 aa13.68□□□□□ -0.22
SQLE-201ENST00000265896 SLC45A2Q9UMX9 530 aa13.68□□□□□ -0.22
SQLE-201ENST00000265896 MALRD1Q5VYJ5 2156 aa13.67□□□□□ -0.22
SQLE-201ENST00000265896 SH2D7A6NKC9 451 aaPredicted RBP13.67□□□□□ -0.22
SQLE-201ENST00000265896 KIR3DL3Q8N743 410 aa13.67□□□□□ -0.22
SQLE-201ENST00000265896 SARAFQ96BY9 339 aa13.67□□□□□ -0.22
SQLE-201ENST00000265896 HARBI1Q96MB7 349 aa13.67□□□□□ -0.22
SQLE-201ENST00000265896 IL19Q9UHD0 177 aa13.67□□□□□ -0.22
SQLE-201ENST00000265896 F2RL2O00254 374 aa13.67□□□□□ -0.22
SQLE-201ENST00000265896 IGLV1-44P01699 117 aa13.67□□□□□ -0.22
SQLE-201ENST00000265896 ORM2P19652 201 aa13.67□□□□□ -0.22
SQLE-201ENST00000265896 GUSBP1Q15486 140 aa13.67□□□□□ -0.22
SQLE-201ENST00000265896 MBNL2Q5VZF2 373 aaKnown RBP13.67□□□□□ -0.22
SQLE-201ENST00000265896 Q71RC1 249 aaPredicted RBP13.67□□□□□ -0.22
SQLE-201ENST00000265896 NPIPB3Q92617 1050 aa13.67□□□□□ -0.22
SQLE-201ENST00000265896 RITA1Q96K30 269 aa13.67□□□□□ -0.22
SQLE-201ENST00000265896 IER2Q9BTL4 223 aa13.67□□□□□ -0.22
SQLE-201ENST00000265896 A0A1W2PS18 150 aa13.66□□□□□ -0.22
SQLE-201ENST00000265896 MT-CO2P00403 227 aa13.66□□□□□ -0.22
SQLE-201ENST00000265896 ST6GALNAC6Q969X2 333 aa13.66□□□□□ -0.22
SQLE-201ENST00000265896 BMPR1BO00238 502 aa13.66□□□□□ -0.22
SQLE-201ENST00000265896 GPX1P07203 203 aa13.66□□□□□ -0.22
SQLE-201ENST00000265896 MFAP2P55001 183 aa13.66□□□□□ -0.22
SQLE-201ENST00000265896 RPL8P62917 257 aaKnown RBP13.66□□□□□ -0.22
SQLE-201ENST00000265896 OR52E5Q8NH55 327 aa13.66□□□□□ -0.22
SQLE-201ENST00000265896 TMEM68Q96MH6 324 aa13.66□□□□□ -0.22
SQLE-201ENST00000265896 PLSCR4Q9NRQ2 329 aa13.66□□□□□ -0.22
SQLE-201ENST00000265896 TMEM265A0A087WTH1 108 aa13.65□□□□□ -0.22
SQLE-201ENST00000265896 H0Y8G0 127 aa13.65□□□□□ -0.22
SQLE-201ENST00000265896 FOXA3P55318 350 aaPredicted RBP13.65□□□□□ -0.22
SQLE-201ENST00000265896 TMPRSS3P57727 454 aa13.65□□□□□ -0.22
SQLE-201ENST00000265896 SPATA45Q537H7 98 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms