RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	ARFGEF3	Q5TH69	2177 aa		13.86	□□□□□ -0.19
CACNA1A-238	ENST00000637276		H3BUT2	72 aa		13.86	□□□□□ -0.19
CACNA1A-238	ENST00000637276	CYP2G1P	Q6ZSU1	146 aa		13.86	□□□□□ -0.19
CACNA1A-238	ENST00000637276	TCF23	Q7RTU1	214 aa		13.86	□□□□□ -0.19
CACNA1A-238	ENST00000637276	FAM216B	Q8N7L0	139 aa		13.86	□□□□□ -0.19
CACNA1A-238	ENST00000637276	TMEM45B	Q96B21	275 aa		13.86	□□□□□ -0.19
CACNA1A-238	ENST00000637276	KBTBD11-OT1	A0A1B0GTJ5	212 aa		13.86	□□□□□ -0.19
CACNA1A-238	ENST00000637276	PLA2G10	O15496	165 aa		13.86	□□□□□ -0.19
CACNA1A-238	ENST00000637276	EGR4	Q05215	589 aa		13.86	□□□□□ -0.19
CACNA1A-238	ENST00000637276		A0A1W2PPV9	198 aa		13.86	□□□□□ -0.19
CACNA1A-238	ENST00000637276	PRSS23	O95084	383 aa		13.86	□□□□□ -0.19
CACNA1A-238	ENST00000637276	ESD	P10768	282 aa		13.86	□□□□□ -0.19
CACNA1A-238	ENST00000637276	PET117	Q6UWS5	81 aa		13.86	□□□□□ -0.19
CACNA1A-238	ENST00000637276	CDC42EP3	Q9UKI2	254 aa		13.86	□□□□□ -0.19
CACNA1A-238	ENST00000637276	TPTE2P1	Q5T6R2	138 aa		13.86	□□□□□ -0.19
CACNA1A-238	ENST00000637276		H7C1H1	209 aa		13.85	□□□□□ -0.19
CACNA1A-238	ENST00000637276	HS3ST3B1	Q9Y662	390 aa		13.85	□□□□□ -0.19
CACNA1A-238	ENST00000637276	CELA3B	P08861	270 aa		13.85	□□□□□ -0.19
CACNA1A-238	ENST00000637276	ZNF818P	Q6ZRF7	136 aa		13.85	□□□□□ -0.19
CACNA1A-238	ENST00000637276	HOGA1	Q86XE5	327 aa		13.85	□□□□□ -0.19
CACNA1A-238	ENST00000637276	AMELY	Q99218	206 aa		13.85	□□□□□ -0.19
CACNA1A-238	ENST00000637276	NAPSA	O96009	420 aa		13.85	□□□□□ -0.19
CACNA1A-238	ENST00000637276	PCP4	P48539	62 aa		13.85	□□□□□ -0.19
CACNA1A-238	ENST00000637276	ZNF329	Q86UD4	541 aa		13.85	□□□□□ -0.19
CACNA1A-238	ENST00000637276	HAPLN4	Q86UW8	402 aa		13.85	□□□□□ -0.19
CACNA1A-238	ENST00000637276	RNF182	Q8N6D2	247 aa		13.85	□□□□□ -0.19
CACNA1A-238	ENST00000637276	ST20	Q9HBF5	79 aa		13.85	□□□□□ -0.19
CACNA1A-238	ENST00000637276	C8orf88	P0DMB2	117 aa		13.85	□□□□□ -0.19
CACNA1A-238	ENST00000637276	MESP2	Q0VG99	397 aa		13.85	□□□□□ -0.19
CACNA1A-238	ENST00000637276	ABCA3	Q99758	1704 aa		13.85	□□□□□ -0.19
CACNA1A-238	ENST00000637276	SCN7A	Q01118	1682 aa		13.85	□□□□□ -0.19
CACNA1A-238	ENST00000637276	OCIAD2	Q56VL3	154 aa		13.85	□□□□□ -0.19
CACNA1A-238	ENST00000637276	ZNF703	Q9H7S9	590 aa	Predicted RBP	13.85	□□□□□ -0.19
CACNA1A-238	ENST00000637276	IGHV4-4	A0A075B6R2	117 aa		13.84	□□□□□ -0.19
CACNA1A-238	ENST00000637276	SMIM6	P0DI80	62 aa		13.84	□□□□□ -0.19
CACNA1A-238	ENST00000637276	AGA	P20933	346 aa		13.84	□□□□□ -0.19
CACNA1A-238	ENST00000637276	C12orf54	Q6X4T0	127 aa		13.84	□□□□□ -0.19
CACNA1A-238	ENST00000637276	SLC22A18AS	Q8N1D0	253 aa		13.84	□□□□□ -0.19
CACNA1A-238	ENST00000637276	WDR34	Q96EX3	536 aa		13.84	□□□□□ -0.19
CACNA1A-238	ENST00000637276	CCL3L1	P16619	93 aa		13.84	□□□□□ -0.19
CACNA1A-238	ENST00000637276	APOBEC3A	P31941	199 aa	Predicted RBP	13.84	□□□□□ -0.19
CACNA1A-238	ENST00000637276	TNFRSF14	Q92956	283 aa		13.84	□□□□□ -0.19
CACNA1A-238	ENST00000637276	TMEM126A	Q9H061	195 aa		13.84	□□□□□ -0.19
CACNA1A-238	ENST00000637276	STAG3L3	P0CL85	134 aa		13.84	□□□□□ -0.19
CACNA1A-238	ENST00000637276	CCL1	P22362	96 aa		13.84	□□□□□ -0.19
CACNA1A-238	ENST00000637276	RPRM	Q9NS64	109 aa		13.84	□□□□□ -0.19
CACNA1A-238	ENST00000637276	ABCA4	P78363	2273 aa		13.84	□□□□□ -0.19
CACNA1A-238	ENST00000637276	TRAV30	A0A087WSZ9	112 aa		13.84	□□□□□ -0.19
CACNA1A-238	ENST00000637276	RS1	O15537	224 aa		13.84	□□□□□ -0.19
CACNA1A-238	ENST00000637276	IFI27	P40305	119 aa	Predicted RBP	13.84	□□□□□ -0.19
CACNA1A-238	ENST00000637276	LINC00596	Q86U02	117 aa		13.84	□□□□□ -0.19
CACNA1A-238	ENST00000637276	TAF15	Q92804	592 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
CACNA1A-238	ENST00000637276	C8orf82	Q6P1X6	216 aa	Predicted RBP	13.83	□□□□□ -0.19
CACNA1A-238	ENST00000637276	GCSAM	Q8N6F7	178 aa		13.83	□□□□□ -0.19
CACNA1A-238	ENST00000637276	COQ2	Q96H96	371 aa		13.83	□□□□□ -0.19
CACNA1A-238	ENST00000637276	TRAV13-1	A0A0B4J241	112 aa		13.83	□□□□□ -0.2
CACNA1A-238	ENST00000637276	RPS20	P60866	119 aa	Known RBP	13.83	□□□□□ -0.2
CACNA1A-238	ENST00000637276	H1FOO	Q8IZA3	346 aa	Predicted RBP	13.83	□□□□□ -0.2
CACNA1A-238	ENST00000637276	RNASE7	Q9H1E1	156 aa	Known RBP	13.83	□□□□□ -0.2
CACNA1A-238	ENST00000637276		A0A1W2PQD3	144 aa		13.83	□□□□□ -0.2
CACNA1A-238	ENST00000637276	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.83	□□□□□ -0.2
CACNA1A-238	ENST00000637276	IGKV2D-40	P01614	121 aa	Predicted RBP	13.83	□□□□□ -0.2
CACNA1A-238	ENST00000637276	RPL15	P61313	204 aa	Known RBP	13.83	□□□□□ -0.2
CACNA1A-238	ENST00000637276	FGF12	P61328	243 aa		13.83	□□□□□ -0.2
CACNA1A-238	ENST00000637276	FAM209A	Q5JX71	171 aa		13.83	□□□□□ -0.2
CACNA1A-238	ENST00000637276	VAX1	Q5SQQ9	334 aa		13.83	□□□□□ -0.2
CACNA1A-238	ENST00000637276	DDA1	Q9BW61	102 aa		13.83	□□□□□ -0.2
CACNA1A-238	ENST00000637276	IGLV2-23	P01705	113 aa		13.83	□□□□□ -0.2
CACNA1A-238	ENST00000637276	CD300LD	Q6UXZ3	194 aa		13.83	□□□□□ -0.2
CACNA1A-238	ENST00000637276	RCHY1	Q96PM5	261 aa		13.83	□□□□□ -0.2
CACNA1A-238	ENST00000637276	UQCR10	Q9UDW1	63 aa		13.83	□□□□□ -0.2
CACNA1A-238	ENST00000637276	ZNF257	Q9Y2Q1	563 aa		13.83	□□□□□ -0.2
CACNA1A-238	ENST00000637276	SDK2	Q58EX2	2172 aa		13.82	□□□□□ -0.2
CACNA1A-238	ENST00000637276		F8VVB4	439 aa		13.82	□□□□□ -0.2
CACNA1A-238	ENST00000637276		F8VWA3	439 aa		13.82	□□□□□ -0.2
CACNA1A-238	ENST00000637276	GAGE2E	Q4V326	116 aa		13.82	□□□□□ -0.2
CACNA1A-238	ENST00000637276	IMMP1L	Q96LU5	166 aa		13.82	□□□□□ -0.2
CACNA1A-238	ENST00000637276	GAGE2D	Q9UEU5	116 aa		13.82	□□□□□ -0.2
CACNA1A-238	ENST00000637276	DTX2	Q86UW9	622 aa		13.82	□□□□□ -0.2
CACNA1A-238	ENST00000637276	TMEM8B	A6NDV4	472 aa		13.82	□□□□□ -0.2
CACNA1A-238	ENST00000637276	FER1L6-AS1	Q8NA97	138 aa		13.82	□□□□□ -0.2
CACNA1A-238	ENST00000637276	G6PC2	Q9NQR9	355 aa		13.82	□□□□□ -0.2
CACNA1A-238	ENST00000637276	CLDN16	Q9Y5I7	305 aa		13.82	□□□□□ -0.2
CACNA1A-238	ENST00000637276	BHLHA9	Q7RTU4	235 aa		13.82	□□□□□ -0.2
CACNA1A-238	ENST00000637276		Q9H3A6	140 aa		13.82	□□□□□ -0.2
CACNA1A-238	ENST00000637276	SDHC	Q99643	169 aa	Predicted RBP	13.81	□□□□□ -0.2
CACNA1A-238	ENST00000637276	NRIP2	Q9BQI9	281 aa		13.81	□□□□□ -0.2
CACNA1A-238	ENST00000637276	FOXS1	O43638	330 aa		13.81	□□□□□ -0.2
CACNA1A-238	ENST00000637276	TNFRSF9	Q07011	255 aa		13.81	□□□□□ -0.2
CACNA1A-238	ENST00000637276	MARS2	Q96GW9	593 aa	Known RBP	13.81	□□□□□ -0.2
CACNA1A-238	ENST00000637276	WFDC6	Q9BQY6	131 aa		13.81	□□□□□ -0.2
CACNA1A-238	ENST00000637276	ABCA7	Q8IZY2	2146 aa		13.81	□□□□□ -0.2
CACNA1A-238	ENST00000637276	AHRR	A9YTQ3	701 aa		13.81	□□□□□ -0.2
CACNA1A-238	ENST00000637276	VWC2L	B2RUY7	222 aa		13.81	□□□□□ -0.2
CACNA1A-238	ENST00000637276	KLHL30-AS1	Q8NEE0	82 aa		13.81	□□□□□ -0.2
CACNA1A-238	ENST00000637276	PRADC1	Q9BSG0	188 aa		13.81	□□□□□ -0.2
CACNA1A-238	ENST00000637276	KIAA2026	Q5HYC2	2103 aa		13.81	□□□□□ -0.2
CACNA1A-238	ENST00000637276	NPIPB13	A6NJU9	1138 aa		13.81	□□□□□ -0.2
CACNA1A-238	ENST00000637276	NPIPB5	A8MRT5	1133 aa		13.81	□□□□□ -0.2
CACNA1A-238	ENST00000637276		H0Y980	276 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms