RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 GCHFRP30047 84 aa15.01□□□□□ -0.01
CACNA1A-227ENST00000636549 MEF2CQ06413 473 aaPredicted RBP15.01□□□□□ -0.01
CACNA1A-227ENST00000636549 H1FOOQ8IZA3 346 aaPredicted RBP15.01□□□□□ -0.01
CACNA1A-227ENST00000636549 C17orf98A8MV24 154 aa15.01□□□□□ -0.01
CACNA1A-227ENST00000636549 IFNL4K9M1U5 179 aa15.01□□□□□ -0.01
CACNA1A-227ENST00000636549 VKORC1Q9BQB6 163 aa15.01□□□□□ -0.01
CACNA1A-227ENST00000636549 JPT2Q9H910 190 aa15.01□□□□□ -0.01
CACNA1A-227ENST00000636549 FAM74A7A6NL05 159 aa15.01□□□□□ -0.01
CACNA1A-227ENST00000636549 C4orf51C9J302 202 aa15.01□□□□□ -0.01
CACNA1A-227ENST00000636549 RNF223E7ERA6 249 aa15.01□□□□□ -0.01
CACNA1A-227ENST00000636549 OR5P3Q8WZ94 311 aa15.01□□□□□ -0.01
CACNA1A-227ENST00000636549 OR11H12B2RN74 326 aa15.01□□□□□ -0.01
CACNA1A-227ENST00000636549 SURF2Q15527 256 aaPredicted RBP15.01□□□□□ -0.01
CACNA1A-227ENST00000636549 OR11H1Q8NG94 326 aa15.01□□□□□ -0.01
CACNA1A-227ENST00000636549 OR11H2Q8NH07 326 aa15.01□□□□□ -0.01
CACNA1A-227ENST00000636549 SLC25A34Q6PIV7 304 aa15□□□□□ -0.01
CACNA1A-227ENST00000636549 TMEM91Q6ZNR0 172 aa15□□□□□ -0.01
CACNA1A-227ENST00000636549 ST20Q9HBF5 79 aa15□□□□□ -0.01
CACNA1A-227ENST00000636549 TMEM250H0YL14 139 aa15□□□□□ -0.01
CACNA1A-227ENST00000636549 AGAP20933 346 aa15□□□□□ -0.01
CACNA1A-227ENST00000636549 CA11O75493 328 aa15□□□□□ -0.01
CACNA1A-227ENST00000636549 Q6ZT83 130 aa15□□□□□ -0.01
CACNA1A-227ENST00000636549 DTX2Q86UW9 622 aa15□□□□□ -0.01
CACNA1A-227ENST00000636549 RCHY1Q96PM5 261 aa15□□□□□ -0.01
CACNA1A-227ENST00000636549 A0A1B0GWB2 263 aa15□□□□□ -0.01
CACNA1A-227ENST00000636549 HMSDA8MTL9 139 aa15□□□□□ -0.01
CACNA1A-227ENST00000636549 NBEAP1P0C6P0 100 aa15□□□□□ -0.01
CACNA1A-227ENST00000636549 AICDAQ9GZX7 198 aa15□□□□□ -0.01
CACNA1A-227ENST00000636549 ZNF318Q5VUA4 2279 aa14.99□□□□□ -0.01
CACNA1A-227ENST00000636549 TRAV8-2A0A0B4J237 113 aa14.99□□□□□ -0.01
CACNA1A-227ENST00000636549 FER1L6-AS1Q8NA97 138 aa14.99□□□□□ -0.01
CACNA1A-227ENST00000636549 IGKV2-40A0A087WW87 121 aaPredicted RBP14.99□□□□□ -0.01
CACNA1A-227ENST00000636549 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.99□□□□□ -0.01
CACNA1A-227ENST00000636549 IGKV2D-40P01614 121 aaPredicted RBP14.99□□□□□ -0.01
CACNA1A-227ENST00000636549 FAM166AQ6J272 317 aa14.99□□□□□ -0.01
CACNA1A-227ENST00000636549 CXCL2P19875 107 aa14.99□□□□□ -0.01
CACNA1A-227ENST00000636549 HOXD3P31249 432 aaPredicted RBP14.99□□□□□ -0.01
CACNA1A-227ENST00000636549 ZP1P60852 638 aa14.99□□□□□ -0.01
CACNA1A-227ENST00000636549 IMMP1LQ96LU5 166 aa14.99□□□□□ -0.01
CACNA1A-227ENST00000636549 NRIP2Q9BQI9 281 aa14.99□□□□□ -0.01
CACNA1A-227ENST00000636549 TBR1Q16650 682 aa14.99□□□□□ -0.01
CACNA1A-227ENST00000636549 TIMM23BQ5SRD1 257 aa14.98□□□□□ -0.01
CACNA1A-227ENST00000636549 ICE1Q9Y2F5 2266 aa14.98□□□□□ -0.01
CACNA1A-227ENST00000636549 TRPM3Q9HCF6 1732 aaPredicted RBP14.98□□□□□ -0.01
CACNA1A-227ENST00000636549 PRADC1Q9BSG0 188 aa14.98□□□□□ -0.01
CACNA1A-227ENST00000636549 ZNF837Q96EG3 531 aaPredicted RBP14.98□□□□□ -0.01
CACNA1A-227ENST00000636549 WDFY2Q96P53 400 aa14.98□□□□□ -0.01
CACNA1A-227ENST00000636549 TNFSF18Q9UNG2 199 aa14.98□□□□□ -0.01
CACNA1A-227ENST00000636549 PAX4O43316 350 aa14.97□□□□□ -0.01
CACNA1A-227ENST00000636549 CLPPQ16740 277 aaPredicted RBP14.97□□□□□ -0.01
CACNA1A-227ENST00000636549 GTF3AQ92664 365 aaKnown RBP14.97□□□□□ -0.01
CACNA1A-227ENST00000636549 MEF2BQ02080 365 aaPredicted RBP14.97□□□□□ -0.01
CACNA1A-227ENST00000636549 RNASE6Q93091 150 aaKnown RBP14.97□□□□□ -0.01
CACNA1A-227ENST00000636549 USP54Q70EL1 1684 aa14.97□□□□□ -0.01
CACNA1A-227ENST00000636549 IFI27P40305 119 aaPredicted RBP14.97□□□□□ -0.01
CACNA1A-227ENST00000636549 ATP5G3P48201 142 aa14.97□□□□□ -0.01
CACNA1A-227ENST00000636549 CD300LDQ6UXZ3 194 aa14.97□□□□□ -0.01
CACNA1A-227ENST00000636549 HEATR5BQ9P2D3 2071 aa14.97□□□□□ -0.01
CACNA1A-227ENST00000636549 IGHV3-16A0A0C4DH30 117 aa14.97□□□□□ -0.01
CACNA1A-227ENST00000636549 MARVELD1Q9BSK0 173 aa14.97□□□□□ -0.01
CACNA1A-227ENST00000636549 RUSC1-AS1Q66K80 236 aa14.96□□□□□ -0.01
CACNA1A-227ENST00000636549 TMEM54Q969K7 222 aa14.96□□□□□ -0.01
CACNA1A-227ENST00000636549 RNASE7Q9H1E1 156 aaKnown RBP14.96□□□□□ -0.01
CACNA1A-227ENST00000636549 MLNRO43193 412 aa14.96□□□□□ -0.01
CACNA1A-227ENST00000636549 COX19Q49B96 90 aa14.96□□□□□ -0.01
CACNA1A-227ENST00000636549 ASPHD2Q6ICH7 369 aa14.96□□□□□ -0.01
CACNA1A-227ENST00000636549 OR52E5Q8NH55 327 aa14.96□□□□□ -0.01
CACNA1A-227ENST00000636549 FAM206AQ9NX38 181 aa14.96□□□□□ -0.01
CACNA1A-227ENST00000636549 CTDSPLO15194 276 aa14.96□□□□□ -0.01
CACNA1A-227ENST00000636549 Q96MF0 132 aa14.96□□□□□ -0.01
CACNA1A-227ENST00000636549 CFHR1Q03591 330 aa14.96□□□□□ -0.02
CACNA1A-227ENST00000636549 C9orf62Q8N4C0 152 aa14.96□□□□□ -0.02
CACNA1A-227ENST00000636549 FCN3O75636 299 aa14.95□□□□□ -0.02
CACNA1A-227ENST00000636549 CTAG1AP78358 180 aa14.95□□□□□ -0.02
CACNA1A-227ENST00000636549 SLC25A39Q9BZJ4 359 aaPredicted RBP14.95□□□□□ -0.02
CACNA1A-227ENST00000636549 TIMM23O14925 209 aa14.95□□□□□ -0.02
CACNA1A-227ENST00000636549 M0QZK8 103 aa14.95□□□□□ -0.02
CACNA1A-227ENST00000636549 NBR2O15453 112 aa14.95□□□□□ -0.02
CACNA1A-227ENST00000636549 PTGDSP41222 190 aa14.95□□□□□ -0.02
CACNA1A-227ENST00000636549 TMEM249Q2WGJ8 235 aa14.95□□□□□ -0.02
CACNA1A-227ENST00000636549 CLPSL2Q6UWE3 100 aa14.95□□□□□ -0.02
CACNA1A-227ENST00000636549 TCF23Q7RTU1 214 aa14.95□□□□□ -0.02
CACNA1A-227ENST00000636549 F5H768 121 aa14.95□□□□□ -0.02
CACNA1A-227ENST00000636549 CEACAM8P31997 349 aaPredicted RBP14.95□□□□□ -0.02
CACNA1A-227ENST00000636549 TMEM155Q4W5P6 130 aa14.95□□□□□ -0.02
CACNA1A-227ENST00000636549 SIGLEC15Q6ZMC9 328 aa14.95□□□□□ -0.02
CACNA1A-227ENST00000636549 FOCADQ5VW36 1801 aa14.95□□□□□ -0.02
CACNA1A-227ENST00000636549 WNT2P09544 360 aa14.95□□□□□ -0.02
CACNA1A-227ENST00000636549 Q0VFX4 171 aa14.95□□□□□ -0.02
CACNA1A-227ENST00000636549 IFI27L2Q9H2X8 130 aa14.95□□□□□ -0.02
CACNA1A-227ENST00000636549 ZFC3H1O60293 1989 aaKnown RBP14.95□□□□□ -0.02
CACNA1A-227ENST00000636549 SAA2-SAA4A0A096LPE2 208 aa14.94□□□□□ -0.02
CACNA1A-227ENST00000636549 SAA2P0DJI9 122 aaPredicted RBP14.94□□□□□ -0.02
CACNA1A-227ENST00000636549 FOXF2Q12947 444 aa14.94□□□□□ -0.02
CACNA1A-227ENST00000636549 UNQ6494/PRO21346Q6UXR6 183 aa14.94□□□□□ -0.02
CACNA1A-227ENST00000636549 MYOFQ9NZM1 2061 aa14.94□□□□□ -0.02
CACNA1A-227ENST00000636549 MBD3L4A6NDZ8 208 aaPredicted RBP14.94□□□□□ -0.02
CACNA1A-227ENST00000636549 MBD3L3A6NE82 208 aaPredicted RBP14.94□□□□□ -0.02
CACNA1A-227ENST00000636549 MBD3L5A6NJ08 208 aaPredicted RBP14.94□□□□□ -0.02
CACNA1A-227ENST00000636549 C17orf100A8MU93 164 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms