RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 RRAS2P62070 204 aaPredicted RBP7.52□□□□□ -1.21
LINC00339-210ENST00000635675 RHOGP84095 191 aa7.52□□□□□ -1.21
LINC00339-210ENST00000635675 DEFA5Q01523 94 aa7.52□□□□□ -1.21
LINC00339-210ENST00000635675 WT1-ASQ06250 92 aa7.52□□□□□ -1.21
LINC00339-210ENST00000635675 ZNF616Q08AN1 781 aa7.52□□□□□ -1.21
LINC00339-210ENST00000635675 TMEM187Q14656 261 aa7.52□□□□□ -1.21
LINC00339-210ENST00000635675 ZNF343Q6P1L6 599 aa7.52□□□□□ -1.21
LINC00339-210ENST00000635675 HSD17B13Q7Z5P4 300 aaPredicted RBP7.52□□□□□ -1.21
LINC00339-210ENST00000635675 LYG2Q86SG7 212 aa7.52□□□□□ -1.21
LINC00339-210ENST00000635675 AKAP14Q86UN6 197 aa7.52□□□□□ -1.21
LINC00339-210ENST00000635675 ZNF429Q86V71 674 aa7.52□□□□□ -1.21
LINC00339-210ENST00000635675 FAM223AQ8IWN6 122 aa7.52□□□□□ -1.21
LINC00339-210ENST00000635675 NECAP1Q8NC96 275 aa7.52□□□□□ -1.21
LINC00339-210ENST00000635675 RBPMSQ93062 196 aaKnown RBP7.52□□□□□ -1.21
LINC00339-210ENST00000635675 CMYA5Q8N3K9 4069 aa7.51□□□□□ -1.21
LINC00339-210ENST00000635675 A0A0G2JRQ6 117 aa7.51□□□□□ -1.21
LINC00339-210ENST00000635675 C9orf170A2RU37 121 aa7.51□□□□□ -1.21
LINC00339-210ENST00000635675 G3V4G9 280 aa7.51□□□□□ -1.21
LINC00339-210ENST00000635675 BOLA2-SMG1P6H3BVE0 249 aa7.51□□□□□ -1.21
LINC00339-210ENST00000635675 CCNKO75909 580 aa7.51□□□□□ -1.21
LINC00339-210ENST00000635675 SIX6O95475 246 aa7.51□□□□□ -1.21
LINC00339-210ENST00000635675 HSPB1P04792 205 aaKnown RBP7.51□□□□□ -1.21
LINC00339-210ENST00000635675 OR8U8P0C7N1 319 aa7.51□□□□□ -1.21
LINC00339-210ENST00000635675 OR13C7P0DN81 318 aa7.51□□□□□ -1.21
LINC00339-210ENST00000635675 IGLL1P15814 213 aa7.51□□□□□ -1.21
LINC00339-210ENST00000635675 AKR1C2P52895 323 aa7.51□□□□□ -1.21
LINC00339-210ENST00000635675 HSPE1P61604 102 aaKnown RBP7.51□□□□□ -1.21
LINC00339-210ENST00000635675 DHRS2Q13268 280 aa7.51□□□□□ -1.21
LINC00339-210ENST00000635675 TMEM128Q5BJH2 165 aa7.51□□□□□ -1.21
LINC00339-210ENST00000635675 OXLD1Q5BKU9 147 aa7.51□□□□□ -1.21
LINC00339-210ENST00000635675 SAMD5Q5TGI4 173 aa7.51□□□□□ -1.21
LINC00339-210ENST00000635675 TMEM268Q5VZI3 342 aa7.51□□□□□ -1.21
LINC00339-210ENST00000635675 Q6ZRM9 215 aa7.51□□□□□ -1.21
LINC00339-210ENST00000635675 FAM219AQ8IW50 185 aa7.51□□□□□ -1.21
LINC00339-210ENST00000635675 ZNF431Q8TF32 576 aaPredicted RBP7.51□□□□□ -1.21
LINC00339-210ENST00000635675 CHAC2Q8WUX2 184 aa7.51□□□□□ -1.21
LINC00339-210ENST00000635675 IL22RA2Q969J5 263 aa7.51□□□□□ -1.21
LINC00339-210ENST00000635675 LSM10Q969L4 123 aaKnown RBP7.51□□□□□ -1.21
LINC00339-210ENST00000635675 RRNAD1Q96FB5 475 aaKnown RBP7.51□□□□□ -1.21
LINC00339-210ENST00000635675 RCC1LQ96I51 464 aaKnown RBP7.51□□□□□ -1.21
LINC00339-210ENST00000635675 HINT2Q9BX68 163 aa7.51□□□□□ -1.21
LINC00339-210ENST00000635675 BOLA1Q9Y3E2 137 aa7.51□□□□□ -1.21
LINC00339-210ENST00000635675 DMRT1Q9Y5R6 373 aa7.51□□□□□ -1.21
LINC00339-210ENST00000635675 IGLV11-55A0A075B6I3 123 aa7.5□□□□□ -1.21
LINC00339-210ENST00000635675 IGHV4OR15-8A0A075B7B6 117 aa7.5□□□□□ -1.21
LINC00339-210ENST00000635675 A0A087WW49 117 aa7.5□□□□□ -1.21
LINC00339-210ENST00000635675 ANKRD34BA5PLL1 514 aa7.5□□□□□ -1.21
LINC00339-210ENST00000635675 FAM25EA8MYX2 175 aa7.5□□□□□ -1.21
LINC00339-210ENST00000635675 LINC01619G3V211 115 aa7.5□□□□□ -1.21
LINC00339-210ENST00000635675 SMLR1H3BR10 107 aa7.5□□□□□ -1.21
LINC00339-210ENST00000635675 OR2J3O76001 311 aa7.5□□□□□ -1.21
LINC00339-210ENST00000635675 NDUFB8O95169 186 aa7.5□□□□□ -1.21
LINC00339-210ENST00000635675 SFT2D2O95562 160 aa7.5□□□□□ -1.21
LINC00339-210ENST00000635675 DEFA4P12838 97 aa7.5□□□□□ -1.21
LINC00339-210ENST00000635675 HIST1H1BP16401 226 aaKnown RBP7.5□□□□□ -1.21
LINC00339-210ENST00000635675 MECP2P51608 486 aaKnown RBP7.5□□□□□ -1.21
LINC00339-210ENST00000635675 PRCDQ00LT1 54 aa7.5□□□□□ -1.21
LINC00339-210ENST00000635675 ATP5G2Q06055 141 aa7.5□□□□□ -1.21
LINC00339-210ENST00000635675 C15orf32Q32M92 178 aa7.5□□□□□ -1.21
LINC00339-210ENST00000635675 AARDQ4LEZ3 155 aa7.5□□□□□ -1.21
LINC00339-210ENST00000635675 KPRPQ5T749 579 aaPredicted RBP7.5□□□□□ -1.21
LINC00339-210ENST00000635675 C12orf45Q8N5I9 185 aaPredicted RBP7.5□□□□□ -1.21
LINC00339-210ENST00000635675 OR11H7Q8NGC8 314 aa7.5□□□□□ -1.21
LINC00339-210ENST00000635675 DPF1Q92782 380 aa7.5□□□□□ -1.21
LINC00339-210ENST00000635675 RANGRFQ9HD47 186 aaPredicted RBP7.5□□□□□ -1.21
LINC00339-210ENST00000635675 FBXL7Q9UJT9 491 aa7.5□□□□□ -1.21
LINC00339-210ENST00000635675 MEGF8Q7Z7M0 2845 aa7.49□□□□□ -1.21
LINC00339-210ENST00000635675 A0A0B4J2A0 478 aa7.49□□□□□ -1.21
LINC00339-210ENST00000635675 SNRPGP15A8MWD9 76 aa7.49□□□□□ -1.21
LINC00339-210ENST00000635675 ST8SIA3O43173 380 aa7.49□□□□□ -1.21
LINC00339-210ENST00000635675 DUS4LO95620 317 aaKnown RBP7.49□□□□□ -1.21
LINC00339-210ENST00000635675 TRBV12-3P01733 135 aa7.49□□□□□ -1.21
LINC00339-210ENST00000635675 ANXA3P12429 323 aa7.49□□□□□ -1.21
LINC00339-210ENST00000635675 CXCL3P19876 107 aa7.49□□□□□ -1.21
LINC00339-210ENST00000635675 SLURP1P55000 103 aa7.49□□□□□ -1.21
LINC00339-210ENST00000635675 MFAP2P55001 183 aa7.49□□□□□ -1.21
LINC00339-210ENST00000635675 SRPXP78539 464 aa7.49□□□□□ -1.21
LINC00339-210ENST00000635675 BEAN1Q3B7T3 259 aa7.49□□□□□ -1.21
LINC00339-210ENST00000635675 ANKRD55Q3KP44 614 aa7.49□□□□□ -1.21
LINC00339-210ENST00000635675 LYZL2Q7Z4W2 148 aa7.49□□□□□ -1.21
LINC00339-210ENST00000635675 C1QL4Q86Z23 238 aa7.49□□□□□ -1.21
LINC00339-210ENST00000635675 LGI3Q8N145 548 aa7.49□□□□□ -1.21
LINC00339-210ENST00000635675 OR2C3Q8N628 320 aa7.49□□□□□ -1.21
LINC00339-210ENST00000635675 SLC35G3Q8N808 338 aa7.49□□□□□ -1.21
LINC00339-210ENST00000635675 RNASE11Q8TAA1 199 aaKnown RBP7.49□□□□□ -1.21
LINC00339-210ENST00000635675 DCUN1D4Q92564 292 aa7.49□□□□□ -1.21
LINC00339-210ENST00000635675 GPR146Q96CH1 333 aa7.49□□□□□ -1.21
LINC00339-210ENST00000635675 WDR89Q96FK6 387 aaPredicted RBP7.49□□□□□ -1.21
LINC00339-210ENST00000635675 MCRIP2Q9BUT9 160 aaKnown RBP7.49□□□□□ -1.21
LINC00339-210ENST00000635675 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.49□□□□□ -1.21
LINC00339-210ENST00000635675 PEF1Q9UBV8 284 aaKnown RBP7.49□□□□□ -1.21
LINC00339-210ENST00000635675 SHPKQ9UHJ6 478 aa7.49□□□□□ -1.21
LINC00339-210ENST00000635675 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.48□□□□□ -1.21
LINC00339-210ENST00000635675 INS-IGF2F8WCM5 200 aa7.48□□□□□ -1.21
LINC00339-210ENST00000635675 HNRNPCP07910 306 aaKnown RBP eCLIP7.48□□□□□ -1.21
LINC00339-210ENST00000635675 HOXB5P09067 269 aa7.48□□□□□ -1.21
LINC00339-210ENST00000635675 ZP3P21754 424 aa7.48□□□□□ -1.21
LINC00339-210ENST00000635675 HOXD3P31249 432 aaPredicted RBP7.48□□□□□ -1.21
LINC00339-210ENST00000635675 EXOSC2Q13868 293 aaKnown RBP7.48□□□□□ -1.21
LINC00339-210ENST00000635675 NMSQ5H8A3 153 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms