RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	SH3BGRL3	Q9H299	93 aa		4.28	□□□□□ -1.72
CBWD3-215	ENST00000619322	GAL3ST2	Q9H3Q3	398 aa		4.28	□□□□□ -1.72
CBWD3-215	ENST00000619322	SLC2A9	Q9NRM0	540 aa		4.28	□□□□□ -1.72
CBWD3-215	ENST00000619322	CSMD2	Q7Z408	3487 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	DNAJC13	O75165	2243 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	ANKHD1	Q8IWZ3	2542 aa	Known RBP	4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	IGKV1D-8	A0A087WSZ0	117 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	INS-IGF2	F8WCM5	200 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322		H0YIZ8	118 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	NDUFB3	O43676	98 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	NUPR1	O60356	82 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	ZNF20	P17024	532 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	DTYMK	P23919	212 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	CEACAM3	P40198	252 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	ERVS71-1	P61550	626 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	TPTE2P1	Q5T6R2	138 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322		Q6P435	159 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	C15orf54	Q8N8G6	183 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	LYPD6B	Q8NI32	183 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	AQP10	Q96PS8	301 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	ZNF2	Q9BSG1	426 aa	Predicted RBP	4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	TMEM59	Q9BXS4	323 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	ZNF430	Q9H8G1	570 aa	Predicted RBP	4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	CENPM	Q9NSP4	180 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	CUBN	O60494	3623 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	LRBA	P50851	2863 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	PRR14L	Q5THK1	2151 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	IGKV1-12	A0A0C4DH73	117 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	IGKV1D-12	P01611	117 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	HLA-DRB1	P01911	266 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	FUT3	P21217	361 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	ANKRD55	Q3KP44	614 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	RNASE10	Q5GAN6	216 aa	Known RBP	4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	TMEM200B	Q69YZ2	307 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	PPP1R35	Q8TAP8	253 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	EMG1	Q92979	244 aa	Known RBP	4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	GINS3	Q9BRX5	216 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	SLC25A31	Q9H0C2	315 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	MOB4	Q9Y3A3	225 aa		4.27	□□□□□ -1.73
CBWD3-215	ENST00000619322	FBLL1	A6NHQ2	334 aa	Known RBP	4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	LGALS9	O00182	355 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	DVL1	O14640	695 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	TK1	P04183	234 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	IGHV4-38-2	P0DP08	117 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	BRS3	P32247	399 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	ARL6IP1	Q15041	203 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	CARD17	Q5XLA6	110 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	TOMM20L	Q6UXN7	152 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	ACOT7L	Q6ZUV0	252 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	BAP18	Q8IXM2	172 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	OR4K15	Q8NH41	348 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	REEP6	Q96HR9	211 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	C8orf49	Q96NF6	230 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	FAM103A1	Q9BTL3	118 aa	Known RBP	4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	ARV1	Q9H2C2	271 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	GPR173	Q9NS66	373 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	ZNF581	Q9P0T4	197 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	CARHSP1	Q9Y2V2	147 aa	Known RBP	4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	TPR	P12270	2363 aa	Known RBP	4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322		A0A0U1RQK1	487 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	GRIFIN	A4D1Z8	144 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	CRYM-AS1	A6NIL9	109 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	TAAR5	O14804	337 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	HMGB3	O15347	200 aa	Known RBP	4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	PSG1	P11464	419 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	OMG	P23515	440 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	TAS2R46	P59540	309 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	VAMP2	P63027	116 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	LEMD1	Q68G75	181 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	LHFPL4	Q7Z7J7	247 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	DRAM1	Q8N682	238 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	GALNT14	Q96FL9	552 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	PHB2	Q99623	299 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	PIGL	Q9Y2B2	252 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	CSMD1	Q96PZ7	3565 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	FREM1	Q5H8C1	2179 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	HOXA3	O43365	443 aa	Predicted RBP	4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	ZNF92	Q03936	586 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	C9orf66	Q5T8R8	295 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	ZNF833P	Q6ZTB9	187 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	MRPL21	Q7Z2W9	205 aa	Known RBP	4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	TMEM256	Q8N2U0	113 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	ZNF709	Q8N972	641 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	OR4C5	Q8NGB2	326 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	OR4P4	Q8NGL7	312 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	MARCH1	Q8TCQ1	289 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	SPACA5	Q96QH8	159 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	SLC5A7	Q9GZV3	580 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	TMEM133	Q9H2Q1	129 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	OR6C3	Q9NZP0	311 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	SLC45A2	Q9UMX9	530 aa		4.26	□□□□□ -1.73
CBWD3-215	ENST00000619322	TRAV25	A0A0B4J276	109 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322		A0A1B0GW55	424 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	hADV38S2	A0JD32	116 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	ANGPTL7	O43827	346 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	NDUFB8	O95169	186 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	CTSD	P07339	412 aa	Predicted RBP	4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	DUX4L2	P0CJ85	424 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	DUX4L3	P0CJ86	424 aa		4.25	□□□□□ -1.73
CBWD3-215	ENST00000619322	DUX4L4	P0CJ87	422 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms