RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 AQP12AQ8IXF9 295 aa4.38□□□□□ -1.71
TPM4-210ENST00000588507 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.38□□□□□ -1.71
TPM4-210ENST00000588507 OR13F1Q8NGS4 319 aa4.38□□□□□ -1.71
TPM4-210ENST00000588507 TMEM167AQ8TBQ9 72 aa4.38□□□□□ -1.71
TPM4-210ENST00000588507 MRPL30Q8TCC3 161 aaKnown RBP4.38□□□□□ -1.71
TPM4-210ENST00000588507 SLC25A46Q96AG3 418 aa4.38□□□□□ -1.71
TPM4-210ENST00000588507 C7orf34Q96L11 122 aa4.38□□□□□ -1.71
TPM4-210ENST00000588507 OR51E2Q9H255 320 aa4.38□□□□□ -1.71
TPM4-210ENST00000588507 TIMM8BQ9Y5J9 83 aaPredicted RBP4.38□□□□□ -1.71
TPM4-210ENST00000588507 PEX16Q9Y5Y5 336 aa4.38□□□□□ -1.71
TPM4-210ENST00000588507 SAC3D1A6NKF1 404 aa4.37□□□□□ -1.71
TPM4-210ENST00000588507 IBA57-AS1B1ANH7 110 aa4.37□□□□□ -1.71
TPM4-210ENST00000588507 KRT8P05787 483 aa4.37□□□□□ -1.71
TPM4-210ENST00000588507 AZU1P20160 251 aa4.37□□□□□ -1.71
TPM4-210ENST00000588507 SERPINA2P20848 420 aa4.37□□□□□ -1.71
TPM4-210ENST00000588507 SLC2A5P22732 501 aa4.37□□□□□ -1.71
TPM4-210ENST00000588507 VAMP1P23763 118 aa4.37□□□□□ -1.71
TPM4-210ENST00000588507 B2MP61769 119 aa4.37□□□□□ -1.71
TPM4-210ENST00000588507 PSG9Q00887 426 aa4.37□□□□□ -1.71
TPM4-210ENST00000588507 GDF5OSQ5U4N7 250 aa4.37□□□□□ -1.71
TPM4-210ENST00000588507 SLC25A24Q6NUK1 477 aa4.37□□□□□ -1.71
TPM4-210ENST00000588507 TOMM20LQ6UXN7 152 aa4.37□□□□□ -1.71
TPM4-210ENST00000588507 CD300LDQ6UXZ3 194 aa4.37□□□□□ -1.71
TPM4-210ENST00000588507 LINC00299Q6ZSB3 139 aa4.37□□□□□ -1.71
TPM4-210ENST00000588507 SSX6Q7RTT6 188 aa4.37□□□□□ -1.71
TPM4-210ENST00000588507 PTX4Q96A99 478 aa4.37□□□□□ -1.71
TPM4-210ENST00000588507 ABHD1Q96SE0 405 aa4.37□□□□□ -1.71
TPM4-210ENST00000588507 RBM38Q9H0Z9 239 aaKnown RBP4.37□□□□□ -1.71
TPM4-210ENST00000588507 ISG20L2Q9H9L3 353 aaKnown RBP4.37□□□□□ -1.71
TPM4-210ENST00000588507 ERVK13-1Q9NX77 482 aa4.37□□□□□ -1.71
TPM4-210ENST00000588507 BLOC1S6Q9UL45 172 aa4.37□□□□□ -1.71
TPM4-210ENST00000588507 ICOSQ9Y6W8 199 aa4.37□□□□□ -1.71
TPM4-210ENST00000588507 A0A1B0GVG6 124 aa4.36□□□□□ -1.71
TPM4-210ENST00000588507 TCRBV3S1A0A5B6 114 aa4.36□□□□□ -1.71
TPM4-210ENST00000588507 ZNF670-ZNF695F2Z2N8 137 aa4.36□□□□□ -1.71
TPM4-210ENST00000588507 MRASO14807 208 aa4.36□□□□□ -1.71
TPM4-210ENST00000588507 NPPAP01160 153 aa4.36□□□□□ -1.71
TPM4-210ENST00000588507 GASTP01350 101 aa4.36□□□□□ -1.71
TPM4-210ENST00000588507 GLAP06280 429 aa4.36□□□□□ -1.71
TPM4-210ENST00000588507 ZBTB25P24278 435 aa4.36□□□□□ -1.71
TPM4-210ENST00000588507 NKX2-1P43699 371 aaPredicted RBP4.36□□□□□ -1.71
TPM4-210ENST00000588507 P2RY1P47900 373 aa4.36□□□□□ -1.71
TPM4-210ENST00000588507 SERPINB10P48595 397 aa4.36□□□□□ -1.71
TPM4-210ENST00000588507 EIF2B2P49770 351 aaKnown RBP4.36□□□□□ -1.71
TPM4-210ENST00000588507 TMBIM6P55061 237 aa4.36□□□□□ -1.71
TPM4-210ENST00000588507 COQ5Q5HYK3 327 aa4.36□□□□□ -1.71
TPM4-210ENST00000588507 RBM48Q5RL73 367 aaKnown RBP4.36□□□□□ -1.71
TPM4-210ENST00000588507 SPINK6Q6UWN8 80 aa4.36□□□□□ -1.71
TPM4-210ENST00000588507 C9orf47Q6ZRZ4 202 aa4.36□□□□□ -1.71
TPM4-210ENST00000588507 CLVS1Q8IUQ0 354 aaPredicted RBP4.36□□□□□ -1.71
TPM4-210ENST00000588507 DHRSXQ8N5I4 330 aa4.36□□□□□ -1.71
TPM4-210ENST00000588507 Q8N976 141 aa4.36□□□□□ -1.71
TPM4-210ENST00000588507 OR9Q2Q8NGE9 314 aa4.36□□□□□ -1.71
TPM4-210ENST00000588507 OR6M1Q8NGM8 313 aa4.36□□□□□ -1.71
TPM4-210ENST00000588507 OR13C3Q8NGS6 347 aa4.36□□□□□ -1.71
TPM4-210ENST00000588507 S100ZQ8WXG8 99 aa4.36□□□□□ -1.71
TPM4-210ENST00000588507 CENPNQ96H22 339 aaPredicted RBP4.36□□□□□ -1.71
TPM4-210ENST00000588507 IGF2BP2-AS1Q96M15 143 aa4.36□□□□□ -1.71
TPM4-210ENST00000588507 S100A13Q99584 98 aa4.36□□□□□ -1.71
TPM4-210ENST00000588507 BCL7BQ9BQE9 202 aa4.36□□□□□ -1.71
TPM4-210ENST00000588507 NXF2Q9GZY0 626 aaKnown RBP4.36□□□□□ -1.71
TPM4-210ENST00000588507 NOP10Q9NPE3 64 aaKnown RBP4.36□□□□□ -1.71
TPM4-210ENST00000588507 PAK1IP1Q9NWT1 392 aaPredicted RBP4.36□□□□□ -1.71
TPM4-210ENST00000588507 RHBDL2Q9NX52 303 aa4.36□□□□□ -1.71
TPM4-210ENST00000588507 hCG_2014768A0A024R1R8 64 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 FAM90A26D6RGX4 464 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 H7C1H1 209 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 CCSO14618 274 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 GSTA4O15217 222 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 GTF2F2P13984 249 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 SRMP19623 302 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 ATP6V1B2P21281 511 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 LORP23490 312 aaPredicted RBP4.35□□□□□ -1.71
TPM4-210ENST00000588507 NPPCP23582 126 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 GATA2P23769 480 aaPredicted RBP4.35□□□□□ -1.71
TPM4-210ENST00000588507 ARFRP1Q13795 201 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 ZNF846Q147U1 533 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 RGS21Q2M5E4 152 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 KRTAP6-3Q3LI67 103 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 TTC23Q5W5X9 447 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 Q6ZNX1 250 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 SLC35F2Q8IXU6 374 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 MS4A15Q8N5U1 240 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 AQP11Q8NBQ7 271 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 OR5D14Q8NGL3 314 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 TEX47Q8TBZ9 253 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 GIPC3Q8TF64 312 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 RAB2BQ8WUD1 216 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 TRUB1Q8WWH5 349 aaKnown RBP4.35□□□□□ -1.71
TPM4-210ENST00000588507 DCUN1D5Q9BTE7 237 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 WDR12Q9GZL7 423 aaKnown RBP4.35□□□□□ -1.71
TPM4-210ENST00000588507 SAV1Q9H4B6 383 aaPredicted RBP4.35□□□□□ -1.71
TPM4-210ENST00000588507 SDHAF2Q9NX18 166 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 OR1A1Q9P1Q5 309 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 ORC6Q9Y5N6 252 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 KIF25-AS1Q9Y6Z4 181 aa4.35□□□□□ -1.71
TPM4-210ENST00000588507 FAM231BA6NCW3 169 aa4.34□□□□□ -1.71
TPM4-210ENST00000588507 METTL15A6NJ78 407 aa4.34□□□□□ -1.71
TPM4-210ENST00000588507 FXYD1O00168 92 aa4.34□□□□□ -1.71
TPM4-210ENST00000588507 TAAR5O14804 337 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms