RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 SP6Q3SY56 376 aa12.24□□□□□ -0.45
VAPA-204ENST00000577901 ACSM6Q6P461 480 aa12.24□□□□□ -0.45
VAPA-204ENST00000577901 OR10W1Q8NGF6 305 aa12.24□□□□□ -0.45
VAPA-204ENST00000577901 DEDD2Q8WXF8 326 aa12.24□□□□□ -0.45
VAPA-204ENST00000577901 LSM10Q969L4 123 aaKnown RBP12.24□□□□□ -0.45
VAPA-204ENST00000577901 FANCD2OSQ96PS1 177 aa12.24□□□□□ -0.45
VAPA-204ENST00000577901 CITED4Q96RK1 184 aa12.24□□□□□ -0.45
VAPA-204ENST00000577901 ELOVL1Q9BW60 279 aa12.24□□□□□ -0.45
VAPA-204ENST00000577901 C5orf66Q9H5L9 145 aa12.24□□□□□ -0.45
VAPA-204ENST00000577901 TMEM14BQ9NUH8 114 aa12.24□□□□□ -0.45
VAPA-204ENST00000577901 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.23□□□□□ -0.45
VAPA-204ENST00000577901 OR13C7P0DN81 318 aa12.23□□□□□ -0.45
VAPA-204ENST00000577901 UCP1P25874 307 aa12.23□□□□□ -0.45
VAPA-204ENST00000577901 MECP2P51608 486 aaKnown RBP12.23□□□□□ -0.45
VAPA-204ENST00000577901 AKR1C2P52895 323 aa12.23□□□□□ -0.45
VAPA-204ENST00000577901 DHODHQ02127 395 aa12.23□□□□□ -0.45
VAPA-204ENST00000577901 KLF9Q13886 244 aaPredicted RBP12.23□□□□□ -0.45
VAPA-204ENST00000577901 RPEL1Q2QD12 228 aa12.23□□□□□ -0.45
VAPA-204ENST00000577901 KLK9Q2XQG4 91 aa12.23□□□□□ -0.45
VAPA-204ENST00000577901 C19orf35Q6ZS72 473 aa12.23□□□□□ -0.45
VAPA-204ENST00000577901 TRIM63Q969Q1 353 aa12.23□□□□□ -0.45
VAPA-204ENST00000577901 EEF1AKMT3Q96AZ1 226 aa12.23□□□□□ -0.45
VAPA-204ENST00000577901 CXorf58Q96LI9 332 aa12.23□□□□□ -0.45
VAPA-204ENST00000577901 OR4C12Q96R67 309 aa12.23□□□□□ -0.45
VAPA-204ENST00000577901 NAA60Q9H7X0 242 aa12.23□□□□□ -0.45
VAPA-204ENST00000577901 KLK9Q9UKQ9 250 aa12.23□□□□□ -0.45
VAPA-204ENST00000577901 KCNIP3Q9Y2W7 256 aa12.23□□□□□ -0.45
VAPA-204ENST00000577901 IGLV11-55A0A075B6I3 123 aa12.22□□□□□ -0.45
VAPA-204ENST00000577901 NDUFB8O95169 186 aa12.22□□□□□ -0.45
VAPA-204ENST00000577901 OR5AC1P0C628 307 aa12.22□□□□□ -0.45
VAPA-204ENST00000577901 INPP1P49441 399 aa12.22□□□□□ -0.45
VAPA-204ENST00000577901 KLF5Q13887 457 aaPredicted RBP12.22□□□□□ -0.45
VAPA-204ENST00000577901 ZFAND6Q6FIF0 208 aa12.22□□□□□ -0.45
VAPA-204ENST00000577901 SGPP2Q8IWX5 399 aa12.22□□□□□ -0.45
VAPA-204ENST00000577901 RNASE11Q8TAA1 199 aaKnown RBP12.22□□□□□ -0.45
VAPA-204ENST00000577901 RRNAD1Q96FB5 475 aaKnown RBP12.22□□□□□ -0.45
VAPA-204ENST00000577901 TM2D3Q9BRN9 247 aa12.22□□□□□ -0.45
VAPA-204ENST00000577901 HYDINQ4G0P3 5121 aa12.22□□□□□ -0.45
VAPA-204ENST00000577901 CRYM-AS1A6NIL9 109 aa12.21□□□□□ -0.45
VAPA-204ENST00000577901 DBX1A6NMT0 343 aa12.21□□□□□ -0.45
VAPA-204ENST00000577901 CDS2O95674 445 aa12.21□□□□□ -0.45
VAPA-204ENST00000577901 IGKV1-5P01602 117 aa12.21□□□□□ -0.45
VAPA-204ENST00000577901 TRBV12-3P01733 135 aa12.21□□□□□ -0.45
VAPA-204ENST00000577901 HSPE1P61604 102 aaKnown RBP12.21□□□□□ -0.45
VAPA-204ENST00000577901 WT1-ASQ06250 92 aa12.21□□□□□ -0.45
VAPA-204ENST00000577901 ZNF57Q68EA5 555 aaPredicted RBP12.21□□□□□ -0.45
VAPA-204ENST00000577901 SLC25A24Q6NUK1 477 aa12.21□□□□□ -0.45
VAPA-204ENST00000577901 OR1L6Q8NGR2 347 aa12.21□□□□□ -0.45
VAPA-204ENST00000577901 SRRQ9GZT4 340 aa12.21□□□□□ -0.45
VAPA-204ENST00000577901 TMEM222Q9H0R3 208 aa12.21□□□□□ -0.45
VAPA-204ENST00000577901 TRBV7-1A0A0A6YYK4 115 aa12.2□□□□□ -0.46
VAPA-204ENST00000577901 IGHV4-30-4P0DP06 118 aa12.2□□□□□ -0.46
VAPA-204ENST00000577901 SYNJ2BPP57105 145 aa12.2□□□□□ -0.46
VAPA-204ENST00000577901 TRIQKQ629K1 86 aa12.2□□□□□ -0.46
VAPA-204ENST00000577901 OR9G4Q8NGQ1 327 aa12.2□□□□□ -0.46
VAPA-204ENST00000577901 GLYATL2Q8WU03 294 aa12.2□□□□□ -0.46
VAPA-204ENST00000577901 PDCD10Q9BUL8 212 aa12.2□□□□□ -0.46
VAPA-204ENST00000577901 F11RQ9Y624 299 aaKnown RBP12.2□□□□□ -0.46
VAPA-204ENST00000577901 SORL1Q92673 2214 aa12.2□□□□□ -0.46
VAPA-204ENST00000577901 BMPR1BO00238 502 aa12.19□□□□□ -0.46
VAPA-204ENST00000577901 GGCTO75223 188 aaKnown RBP12.19□□□□□ -0.46
VAPA-204ENST00000577901 IGHV3-23P01764 117 aa12.19□□□□□ -0.46
VAPA-204ENST00000577901 ANXA3P12429 323 aa12.19□□□□□ -0.46
VAPA-204ENST00000577901 AKR1C4P17516 323 aa12.19□□□□□ -0.46
VAPA-204ENST00000577901 ERHP84090 104 aaKnown RBP12.19□□□□□ -0.46
VAPA-204ENST00000577901 PRCDQ00LT1 54 aa12.19□□□□□ -0.46
VAPA-204ENST00000577901 CLEC19AQ6UXS0 136 aa12.19□□□□□ -0.46
VAPA-204ENST00000577901 HAPLN4Q86UW8 402 aa12.19□□□□□ -0.46
VAPA-204ENST00000577901 FAM219AQ8IW50 185 aa12.19□□□□□ -0.46
VAPA-204ENST00000577901 Q8N1Y9 231 aa12.19□□□□□ -0.46
VAPA-204ENST00000577901 RBPMSQ93062 196 aaKnown RBP12.19□□□□□ -0.46
VAPA-204ENST00000577901 SLC25A21Q9BQT8 299 aaPredicted RBP12.19□□□□□ -0.46
VAPA-204ENST00000577901 EDA2RQ9HAV5 297 aa12.19□□□□□ -0.46
VAPA-204ENST00000577901 PLEKHA3Q9HB20 300 aa12.19□□□□□ -0.46
VAPA-204ENST00000577901 PEMTQ9UBM1 199 aa12.19□□□□□ -0.46
VAPA-204ENST00000577901 A0A0B4J293 547 aa12.18□□□□□ -0.46
VAPA-204ENST00000577901 PPP5D1E7EU14 171 aa12.18□□□□□ -0.46
VAPA-204ENST00000577901 IFNA17P01571 189 aa12.18□□□□□ -0.46
VAPA-204ENST00000577901 P0C879 139 aa12.18□□□□□ -0.46
VAPA-204ENST00000577901 ARL3P36405 182 aa12.18□□□□□ -0.46
VAPA-204ENST00000577901 IZUMO4Q1ZYL8 232 aa12.18□□□□□ -0.46
VAPA-204ENST00000577901 TMEM268Q5VZI3 342 aa12.18□□□□□ -0.46
VAPA-204ENST00000577901 SELENOHQ8IZQ5 122 aaKnown RBP12.18□□□□□ -0.46
VAPA-204ENST00000577901 VN1R17PQ8TDU5 208 aa12.18□□□□□ -0.46
VAPA-204ENST00000577901 GALNT14Q96FL9 552 aa12.18□□□□□ -0.46
VAPA-204ENST00000577901 C19orf73Q9NVV2 129 aa12.18□□□□□ -0.46
VAPA-204ENST00000577901 S4R3C0 116 aa12.18□□□□□ -0.46
VAPA-204ENST00000577901 PIGBOS1A0A0B4J2F0 54 aa12.17□□□□□ -0.46
VAPA-204ENST00000577901 IGLV1-51P01701 117 aa12.17□□□□□ -0.46
VAPA-204ENST00000577901 CLEC3BP05452 202 aa12.17□□□□□ -0.46
VAPA-204ENST00000577901 BAK1Q16611 211 aa12.17□□□□□ -0.46
VAPA-204ENST00000577901 OR2C3Q8N628 320 aa12.17□□□□□ -0.46
VAPA-204ENST00000577901 SLC35G3Q8N808 338 aa12.17□□□□□ -0.46
VAPA-204ENST00000577901 OR1P1Q8NH06 330 aa12.17□□□□□ -0.46
VAPA-204ENST00000577901 IL22RA2Q969J5 263 aa12.17□□□□□ -0.46
VAPA-204ENST00000577901 TMEM230Q96A57 120 aa12.17□□□□□ -0.46
VAPA-204ENST00000577901 CCDC140Q96MF4 163 aa12.17□□□□□ -0.46
VAPA-204ENST00000577901 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.17□□□□□ -0.46
VAPA-204ENST00000577901 DMRT1Q9Y5R6 373 aa12.17□□□□□ -0.46
VAPA-204ENST00000577901 TMEM56-RWDD3S4R434 201 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms