RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 A0A0A6YYH2 397 aa6.35□□□□□ -1.39
CTDNEP1-203ENST00000570385 OR4C46A6NHA9 309 aa6.35□□□□□ -1.39
CTDNEP1-203ENST00000570385 A6NJ64 397 aa6.35□□□□□ -1.39
CTDNEP1-203ENST00000570385 UBE2CO00762 179 aa6.35□□□□□ -1.39
CTDNEP1-203ENST00000570385 CTSGP08311 255 aa6.35□□□□□ -1.39
CTDNEP1-203ENST00000570385 CBX5P45973 191 aa6.35□□□□□ -1.39
CTDNEP1-203ENST00000570385 SCAND1P57086 179 aa6.35□□□□□ -1.39
CTDNEP1-203ENST00000570385 LSM3P62310 102 aaKnown RBP6.35□□□□□ -1.39
CTDNEP1-203ENST00000570385 THOC7Q6I9Y2 204 aaKnown RBP6.35□□□□□ -1.39
CTDNEP1-203ENST00000570385 SPSB3Q6PJ21 355 aa6.35□□□□□ -1.39
CTDNEP1-203ENST00000570385 DHRS11Q6UWP2 260 aa6.35□□□□□ -1.39
CTDNEP1-203ENST00000570385 OR5H2Q8NGV7 314 aa6.35□□□□□ -1.39
CTDNEP1-203ENST00000570385 SLC25A46Q96AG3 418 aa6.35□□□□□ -1.39
CTDNEP1-203ENST00000570385 MOB3AQ96BX8 217 aa6.35□□□□□ -1.39
CTDNEP1-203ENST00000570385 S100A16Q96FQ6 103 aaKnown RBP6.35□□□□□ -1.39
CTDNEP1-203ENST00000570385 ZNF414Q96IQ9 312 aa6.35□□□□□ -1.39
CTDNEP1-203ENST00000570385 RHPN1-AS1Q9BWJ2 59 aa6.35□□□□□ -1.39
CTDNEP1-203ENST00000570385 FXYD6Q9H0Q3 95 aa6.35□□□□□ -1.39
CTDNEP1-203ENST00000570385 MAP6D1Q9H9H5 199 aa6.35□□□□□ -1.39
CTDNEP1-203ENST00000570385 SMPXQ9UHP9 88 aa6.35□□□□□ -1.39
CTDNEP1-203ENST00000570385 TP53TG1Q9Y2A0 90 aa6.35□□□□□ -1.39
CTDNEP1-203ENST00000570385 KLK5Q9Y337 293 aaPredicted RBP6.35□□□□□ -1.39
CTDNEP1-203ENST00000570385 IGHV3-66A0A0C4DH42 116 aa6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 KIR2DL5BA0A0G2JN68 375 aa6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 KIR2DL5BA0A0G2JPC4 375 aa6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 IGHV7-4-1A0A0J9YVY3 117 aa6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 K7EMT4 169 aa6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 CHEK1O14757 476 aa6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 DEFB4AO15263 64 aa6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 NUPL2O15504 423 aaKnown RBP6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 XRCC3O43542 346 aa6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 ATP6V1G2O95670 118 aa6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 HLA-DMAP28067 261 aa6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 TAS2R20P59543 309 aa6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 NANOS2P60321 138 aaKnown RBP6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 SPINK9Q5DT21 86 aa6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 TMEM69Q5SWH9 247 aa6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 HSD17B13Q7Z5P4 300 aaPredicted RBP6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 CMTM1Q8IZ96 169 aa6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 KIR2DL5AQ8N109 375 aa6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 SAMD12Q8N8I0 201 aa6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 TMEM116Q8NCL8 245 aa6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 OR6F1Q8NGZ6 308 aa6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 KIR2DL5BQ8NHK3 375 aa6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 PHLDA1Q8WV24 401 aaPredicted RBP6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 PINX1Q96BK5 328 aaKnown RBP6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 GALNT14Q96FL9 552 aa6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 KRTAP17-1Q9BYP8 105 aa6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 Q9H521 79 aa6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 FBXL17Q9UF56 701 aa6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 PRNDQ9UKY0 176 aa6.34□□□□□ -1.39
CTDNEP1-203ENST00000570385 AGRNO00468 2067 aa6.34□□□□□ -1.4
CTDNEP1-203ENST00000570385 C15orf61A6NNL5 157 aa6.33□□□□□ -1.4
CTDNEP1-203ENST00000570385 C15orf62A8K5M9 175 aa6.33□□□□□ -1.4
CTDNEP1-203ENST00000570385 MPTX1A8MV57 137 aa6.33□□□□□ -1.4
CTDNEP1-203ENST00000570385 I3L2K1 104 aa6.33□□□□□ -1.4
CTDNEP1-203ENST00000570385 GPR31O00270 319 aa6.33□□□□□ -1.4
CTDNEP1-203ENST00000570385 HRH1P35367 487 aa6.33□□□□□ -1.4
CTDNEP1-203ENST00000570385 RPS19P39019 145 aaKnown RBP6.33□□□□□ -1.4
CTDNEP1-203ENST00000570385 IZUMO4Q1ZYL8 232 aa6.33□□□□□ -1.4
CTDNEP1-203ENST00000570385 UBE2NLQ5JXB2 153 aa6.33□□□□□ -1.4
CTDNEP1-203ENST00000570385 LYSMD2Q8IV50 215 aa6.33□□□□□ -1.4
CTDNEP1-203ENST00000570385 TMEM217Q8N7C4 229 aa6.33□□□□□ -1.4
CTDNEP1-203ENST00000570385 BORCS5Q969J3 196 aa6.33□□□□□ -1.4
CTDNEP1-203ENST00000570385 TMEM56Q96MV1 263 aa6.33□□□□□ -1.4
CTDNEP1-203ENST00000570385 RARRES2Q99969 163 aa6.33□□□□□ -1.4
CTDNEP1-203ENST00000570385 YTHDF1Q9BYJ9 559 aaKnown RBP6.33□□□□□ -1.4
CTDNEP1-203ENST00000570385 CSTL1Q9H114 145 aa6.33□□□□□ -1.4
CTDNEP1-203ENST00000570385 TRAV14DV4A0A0A6YYC5 116 aa6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 MT-CO2P00403 227 aa6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 APOHP02749 345 aaPredicted RBP6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 EIF4EP06730 217 aaKnown RBP6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 FGF2P09038 288 aa6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 PRSS3P35030 304 aa6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 MFAP4P55083 255 aa6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 TAS2R46P59540 309 aa6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 TSPAN5P62079 268 aa6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 RPL11P62913 178 aaKnown RBP6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 RELQ04864 619 aaPredicted RBP6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 LEMD1Q68G75 181 aa6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 TCF24Q7RTU0 167 aa6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 H2BFWTQ7Z2G1 175 aa6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 TBC1D26Q86UD7 250 aa6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 LILRB2Q8N423 598 aa6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 OR1P1Q8NH06 330 aa6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 OR11H2Q8NH07 326 aa6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 OR4A16Q8NH70 328 aa6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 C11orf45Q8TAV5 145 aa6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 ST8SIA2Q92186 375 aa6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 MRGPRFQ96AM1 343 aa6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 C6orf62Q9GZU0 229 aaPredicted RBP6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 TMEM14BQ9NUH8 114 aa6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 FKBP11Q9NYL4 201 aa6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 ANAPC10Q9UM13 185 aa6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 FRAS1Q86XX4 4008 aa6.32□□□□□ -1.4
CTDNEP1-203ENST00000570385 DNAH10Q8IVF4 4471 aa6.31□□□□□ -1.4
CTDNEP1-203ENST00000570385 ST8SIA3O43173 380 aa6.31□□□□□ -1.4
CTDNEP1-203ENST00000570385 GNG7O60262 68 aa6.31□□□□□ -1.4
CTDNEP1-203ENST00000570385 DFFBO76075 338 aa6.31□□□□□ -1.4
CTDNEP1-203ENST00000570385 CA1P00915 261 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms