RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 C21orf62Q9NYP8 219 aa11.78□□□□□ -0.52
SF3B3-203ENST00000562874 EXTL2Q9UBQ6 330 aa11.78□□□□□ -0.52
SF3B3-203ENST00000562874 UBQLN2Q9UHD9 624 aa11.78□□□□□ -0.52
SF3B3-203ENST00000562874 PRNDQ9UKY0 176 aa11.78□□□□□ -0.52
SF3B3-203ENST00000562874 K7EIM0 57 aa11.77□□□□□ -0.53
SF3B3-203ENST00000562874 CYB5BO43169 146 aa11.77□□□□□ -0.53
SF3B3-203ENST00000562874 Q56UQ5 140 aa11.77□□□□□ -0.53
SF3B3-203ENST00000562874 GPR107Q5VW38 600 aa11.77□□□□□ -0.53
SF3B3-203ENST00000562874 SLC38A6Q8IZM9 456 aa11.77□□□□□ -0.53
SF3B3-203ENST00000562874 OR52I2Q8NH67 350 aa11.77□□□□□ -0.53
SF3B3-203ENST00000562874 BSCL2Q96G97 398 aaPredicted RBP11.77□□□□□ -0.53
SF3B3-203ENST00000562874 SEC22AQ96IW7 307 aa11.77□□□□□ -0.53
SF3B3-203ENST00000562874 C20orf24Q9BUV8 137 aa11.77□□□□□ -0.53
SF3B3-203ENST00000562874 TMEM14BQ9NUH8 114 aa11.77□□□□□ -0.53
SF3B3-203ENST00000562874 KLK11Q9UBX7 282 aa11.77□□□□□ -0.53
SF3B3-203ENST00000562874 UFC1Q9Y3C8 167 aa11.77□□□□□ -0.53
SF3B3-203ENST00000562874 IGHV3-48P01763 117 aa11.76□□□□□ -0.53
SF3B3-203ENST00000562874 C8orf88P0DMB2 117 aa11.76□□□□□ -0.53
SF3B3-203ENST00000562874 PGAM2P15259 253 aa11.76□□□□□ -0.53
SF3B3-203ENST00000562874 S100GP29377 79 aa11.76□□□□□ -0.53
SF3B3-203ENST00000562874 ADMP35318 185 aa11.76□□□□□ -0.53
SF3B3-203ENST00000562874 RBPMS2Q6ZRY4 209 aaKnown RBP11.76□□□□□ -0.53
SF3B3-203ENST00000562874 H2BFWTQ7Z2G1 175 aa11.76□□□□□ -0.53
SF3B3-203ENST00000562874 OR1L6Q8NGR2 347 aa11.76□□□□□ -0.53
SF3B3-203ENST00000562874 OR5B3Q8NH48 314 aa11.76□□□□□ -0.53
SF3B3-203ENST00000562874 MISP3Q96FF7 219 aa11.76□□□□□ -0.53
SF3B3-203ENST00000562874 TMEM56Q96MV1 263 aa11.76□□□□□ -0.53
SF3B3-203ENST00000562874 MRPL27Q9P0M9 148 aaKnown RBP11.76□□□□□ -0.53
SF3B3-203ENST00000562874 LCE6AA0A183 80 aa11.75□□□□□ -0.53
SF3B3-203ENST00000562874 CD3DP04234 171 aa11.75□□□□□ -0.53
SF3B3-203ENST00000562874 RNASE10Q5GAN6 216 aaKnown RBP11.75□□□□□ -0.53
SF3B3-203ENST00000562874 LPCAT3Q6P1A2 487 aa11.75□□□□□ -0.53
SF3B3-203ENST00000562874 MZT2AQ6P582 158 aa11.75□□□□□ -0.53
SF3B3-203ENST00000562874 OR4D10Q8NGI6 311 aa11.75□□□□□ -0.53
SF3B3-203ENST00000562874 OR4A16Q8NH70 328 aa11.75□□□□□ -0.53
SF3B3-203ENST00000562874 AP3S1Q92572 193 aa11.75□□□□□ -0.53
SF3B3-203ENST00000562874 MARC2Q969Z3 335 aa11.75□□□□□ -0.53
SF3B3-203ENST00000562874 ZNF414Q96IQ9 312 aa11.75□□□□□ -0.53
SF3B3-203ENST00000562874 TSC22D3Q99576 134 aa11.75□□□□□ -0.53
SF3B3-203ENST00000562874 DAZ1Q9NQZ3 744 aaKnown RBP11.75□□□□□ -0.53
SF3B3-203ENST00000562874 NDUFA4O00483 81 aa11.74□□□□□ -0.53
SF3B3-203ENST00000562874 ELLP55199 621 aaPredicted RBP11.74□□□□□ -0.53
SF3B3-203ENST00000562874 UCP3P55916 312 aa11.74□□□□□ -0.53
SF3B3-203ENST00000562874 PIGPP57054 158 aa11.74□□□□□ -0.53
SF3B3-203ENST00000562874 PRCDQ00LT1 54 aa11.74□□□□□ -0.53
SF3B3-203ENST00000562874 FAAP20Q6NZ36 180 aa11.74□□□□□ -0.53
SF3B3-203ENST00000562874 LHFPL1Q86WI0 220 aa11.74□□□□□ -0.53
SF3B3-203ENST00000562874 OR2C3Q8N628 320 aa11.74□□□□□ -0.53
SF3B3-203ENST00000562874 PINX1Q96BK5 328 aaKnown RBP11.74□□□□□ -0.53
SF3B3-203ENST00000562874 TP53RKQ96S44 253 aa11.74□□□□□ -0.53
SF3B3-203ENST00000562874 GGTLC1Q9BX51 225 aa11.74□□□□□ -0.53
SF3B3-203ENST00000562874 FKBP11Q9NYL4 201 aa11.74□□□□□ -0.53
SF3B3-203ENST00000562874 IGHV3-49A0A0A0MS15 119 aa11.73□□□□□ -0.53
SF3B3-203ENST00000562874 IGKV1-5P01602 117 aa11.73□□□□□ -0.53
SF3B3-203ENST00000562874 ZNF182P17025 639 aaPredicted RBP11.73□□□□□ -0.53
SF3B3-203ENST00000562874 AKR1C2P52895 323 aa11.73□□□□□ -0.53
SF3B3-203ENST00000562874 SPSB3Q6PJ21 355 aa11.73□□□□□ -0.53
SF3B3-203ENST00000562874 CADM3Q8N126 398 aa11.73□□□□□ -0.53
SF3B3-203ENST00000562874 OR1P1Q8NH06 330 aa11.73□□□□□ -0.53
SF3B3-203ENST00000562874 ABHD1Q96SE0 405 aa11.73□□□□□ -0.53
SF3B3-203ENST00000562874 MIXL1Q9H2W2 232 aa11.73□□□□□ -0.53
SF3B3-203ENST00000562874 FAM212BQ9NTI7 297 aaPredicted RBP11.73□□□□□ -0.53
SF3B3-203ENST00000562874 LOC102724200A0A096LPH7 203 aaPredicted RBP11.72□□□□□ -0.53
SF3B3-203ENST00000562874 TRAV25A0A0B4J276 109 aa11.72□□□□□ -0.53
SF3B3-203ENST00000562874 I3L2K1 104 aa11.72□□□□□ -0.53
SF3B3-203ENST00000562874 MT-CO2P00403 227 aa11.72□□□□□ -0.53
SF3B3-203ENST00000562874 ANKRD55Q3KP44 614 aa11.72□□□□□ -0.53
SF3B3-203ENST00000562874 SCGB2B2Q4G0G5 96 aa11.72□□□□□ -0.53
SF3B3-203ENST00000562874 SPAG8Q99932 426 aaPredicted RBP11.72□□□□□ -0.53
SF3B3-203ENST00000562874 C5orf66Q9H5L9 145 aa11.72□□□□□ -0.53
SF3B3-203ENST00000562874 MTFP1Q9UDX5 166 aa11.72□□□□□ -0.53
SF3B3-203ENST00000562874 AGRNO00468 2067 aa11.71□□□□□ -0.53
SF3B3-203ENST00000562874 IGHV3OR16-13A0A075B7E8 117 aa11.71□□□□□ -0.53
SF3B3-203ENST00000562874 IGHV3-74A0A0B4J1X5 117 aa11.71□□□□□ -0.53
SF3B3-203ENST00000562874 RGS5O15539 181 aa11.71□□□□□ -0.53
SF3B3-203ENST00000562874 CTSGP08311 255 aa11.71□□□□□ -0.53
SF3B3-203ENST00000562874 RND3P61587 244 aa11.71□□□□□ -0.53
SF3B3-203ENST00000562874 SPCS2Q15005 226 aa11.71□□□□□ -0.53
SF3B3-203ENST00000562874 ODF3L2Q3SX64 289 aa11.71□□□□□ -0.53
SF3B3-203ENST00000562874 SP6Q3SY56 376 aa11.71□□□□□ -0.53
SF3B3-203ENST00000562874 ARRDC1Q8N5I2 433 aa11.71□□□□□ -0.53
SF3B3-203ENST00000562874 ZNF114Q8NC26 417 aa11.71□□□□□ -0.53
SF3B3-203ENST00000562874 OR13C8Q8NGS7 320 aa11.71□□□□□ -0.53
SF3B3-203ENST00000562874 MRPS26Q9BYN8 205 aaKnown RBP11.71□□□□□ -0.53
SF3B3-203ENST00000562874 IGKV3-7A0A075B6H7 116 aa11.7□□□□□ -0.54
SF3B3-203ENST00000562874 A0A0G2JRQ6 117 aa11.7□□□□□ -0.54
SF3B3-203ENST00000562874 TSPAN4O14817 238 aa11.7□□□□□ -0.54
SF3B3-203ENST00000562874 NUPL2O15504 423 aaKnown RBP11.7□□□□□ -0.54
SF3B3-203ENST00000562874 YIF1AO95070 293 aa11.7□□□□□ -0.54
SF3B3-203ENST00000562874 CTSDP07339 412 aaPredicted RBP11.7□□□□□ -0.54
SF3B3-203ENST00000562874 HSPE1P61604 102 aaKnown RBP11.7□□□□□ -0.54
SF3B3-203ENST00000562874 TRIM16LQ309B1 348 aa11.7□□□□□ -0.54
SF3B3-203ENST00000562874 GPR141Q7Z602 305 aa11.7□□□□□ -0.54
SF3B3-203ENST00000562874 SLC35G3Q8N808 338 aa11.7□□□□□ -0.54
SF3B3-203ENST00000562874 MARCH1Q8TCQ1 289 aa11.7□□□□□ -0.54
SF3B3-203ENST00000562874 ZNF486Q96H40 463 aaPredicted RBP11.7□□□□□ -0.54
SF3B3-203ENST00000562874 HYDINQ4G0P3 5121 aa11.7□□□□□ -0.54
SF3B3-203ENST00000562874 C3orf85A0A1B0GTC6 90 aa11.69□□□□□ -0.54
SF3B3-203ENST00000562874 ST8SIA3O43173 380 aa11.69□□□□□ -0.54
SF3B3-203ENST00000562874 GNG7O60262 68 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms