RNA–Protein interactions for RNA: ENST00000560583.5

RPL28-210, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 1,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-210ENST00000560583 DISC1C4P0D8 188 aa13.39□□□□□ -0.27
RPL28-210ENST00000560583 GPR183P32249 361 aa13.39□□□□□ -0.27
RPL28-210ENST00000560583 MEF2DQ14814 521 aa13.39□□□□□ -0.27
RPL28-210ENST00000560583 TM4SF20Q53R12 229 aa13.39□□□□□ -0.27
RPL28-210ENST00000560583 ZNF57Q68EA5 555 aaPredicted RBP13.39□□□□□ -0.27
RPL28-210ENST00000560583 CCDC71LQ8N9Z2 235 aa13.39□□□□□ -0.27
RPL28-210ENST00000560583 UXS1Q8NBZ7 420 aa13.39□□□□□ -0.27
RPL28-210ENST00000560583 OR10W1Q8NGF6 305 aa13.39□□□□□ -0.27
RPL28-210ENST00000560583 SMIM4Q8WVI0 70 aa13.39□□□□□ -0.27
RPL28-210ENST00000560583 CXorf58Q96LI9 332 aa13.39□□□□□ -0.27
RPL28-210ENST00000560583 RSL24D1Q9UHA3 163 aaKnown RBP13.39□□□□□ -0.27
RPL28-210ENST00000560583 CYB5BO43169 146 aa13.38□□□□□ -0.27
RPL28-210ENST00000560583 CLEC3BP05452 202 aa13.38□□□□□ -0.27
RPL28-210ENST00000560583 SERPINE2P07093 398 aa13.38□□□□□ -0.27
RPL28-210ENST00000560583 FGF2P09038 288 aa13.38□□□□□ -0.27
RPL28-210ENST00000560583 WT1-ASQ06250 92 aa13.38□□□□□ -0.27
RPL28-210ENST00000560583 FAM106AQ4KMX7 169 aa13.38□□□□□ -0.27
RPL28-210ENST00000560583 THOC7Q6I9Y2 204 aaKnown RBP13.38□□□□□ -0.27
RPL28-210ENST00000560583 ZFAND1Q8TCF1 268 aa13.38□□□□□ -0.27
RPL28-210ENST00000560583 ZNF486Q96H40 463 aaPredicted RBP13.38□□□□□ -0.27
RPL28-210ENST00000560583 SRSF8Q9BRL6 282 aaKnown RBP13.38□□□□□ -0.27
RPL28-210ENST00000560583 QTRT1Q9BXR0 403 aaKnown RBP13.38□□□□□ -0.27
RPL28-210ENST00000560583 SLIRPQ9GZT3 109 aaKnown RBP13.38□□□□□ -0.27
RPL28-210ENST00000560583 COPZ2Q9P299 210 aa13.38□□□□□ -0.27
RPL28-210ENST00000560583 IGHV3-35A0A0C4DH35 117 aa13.37□□□□□ -0.27
RPL28-210ENST00000560583 SCAF4O95104 1147 aaKnown RBP13.37□□□□□ -0.27
RPL28-210ENST00000560583 AKAIN1P0CW23 69 aa13.37□□□□□ -0.27
RPL28-210ENST00000560583 TRAPPC2P0DI81 140 aa13.37□□□□□ -0.27
RPL28-210ENST00000560583 TRAPPC2BP0DI82 140 aa13.37□□□□□ -0.27
RPL28-210ENST00000560583 C8orf88P0DMB2 117 aa13.37□□□□□ -0.27
RPL28-210ENST00000560583 PI3P19957 117 aa13.37□□□□□ -0.27
RPL28-210ENST00000560583 S100A5P33763 92 aa13.37□□□□□ -0.27
RPL28-210ENST00000560583 MFAP2P55001 183 aa13.37□□□□□ -0.27
RPL28-210ENST00000560583 PIGPP57054 158 aa13.37□□□□□ -0.27
RPL28-210ENST00000560583 SLC16A13Q7RTY0 426 aa13.37□□□□□ -0.27
RPL28-210ENST00000560583 H2BFWTQ7Z2G1 175 aa13.37□□□□□ -0.27
RPL28-210ENST00000560583 GDPD1Q8N9F7 314 aa13.37□□□□□ -0.27
RPL28-210ENST00000560583 OR4D10Q8NGI6 311 aa13.37□□□□□ -0.27
RPL28-210ENST00000560583 OR1L8Q8NGR8 309 aa13.37□□□□□ -0.27
RPL28-210ENST00000560583 TSC22D3Q99576 134 aa13.37□□□□□ -0.27
RPL28-210ENST00000560583 FAM212BQ9NTI7 297 aaPredicted RBP13.37□□□□□ -0.27
RPL28-210ENST00000560583 C14orf166Q9Y224 244 aaKnown RBP13.37□□□□□ -0.27
RPL28-210ENST00000560583 FABP12A6NFH5 140 aa13.36□□□□□ -0.27
RPL28-210ENST00000560583 CTDSPLO15194 276 aa13.36□□□□□ -0.27
RPL28-210ENST00000560583 CD74P04233 296 aa13.36□□□□□ -0.27
RPL28-210ENST00000560583 PTBP1P26599 531 aaKnown RBP eCLIP13.36□□□□□ -0.27
RPL28-210ENST00000560583 ZNF585BQ52M93 769 aa13.36□□□□□ -0.27
RPL28-210ENST00000560583 FAAP20Q6NZ36 180 aa13.36□□□□□ -0.27
RPL28-210ENST00000560583 OR52B4Q8NGK2 314 aa13.36□□□□□ -0.27
RPL28-210ENST00000560583 OR4A16Q8NH70 328 aa13.36□□□□□ -0.27
RPL28-210ENST00000560583 TERB2Q8NHR7 220 aa13.36□□□□□ -0.27
RPL28-210ENST00000560583 RNASE11Q8TAA1 199 aaKnown RBP13.36□□□□□ -0.27
RPL28-210ENST00000560583 TMEM190Q8WZ59 177 aa13.36□□□□□ -0.27
RPL28-210ENST00000560583 ZNF436Q9C0F3 470 aaPredicted RBP13.36□□□□□ -0.27
RPL28-210ENST00000560583 FKBP11Q9NYL4 201 aa13.36□□□□□ -0.27
RPL28-210ENST00000560583 PRNDQ9UKY0 176 aa13.36□□□□□ -0.27
RPL28-210ENST00000560583 NSG2Q9Y328 171 aa13.36□□□□□ -0.27
RPL28-210ENST00000560583 OR51B2Q9Y5P1 312 aa13.36□□□□□ -0.27
RPL28-210ENST00000560583 TEX50A0A1B0GTY4 177 aa13.35□□□□□ -0.27
RPL28-210ENST00000560583 ATG12O94817 140 aa13.35□□□□□ -0.27
RPL28-210ENST00000560583 TNFSF8P32971 234 aa13.35□□□□□ -0.27
RPL28-210ENST00000560583 AKR1C2P52895 323 aa13.35□□□□□ -0.27
RPL28-210ENST00000560583 RND3P61587 244 aa13.35□□□□□ -0.27
RPL28-210ENST00000560583 TRIM16LQ309B1 348 aa13.35□□□□□ -0.27
RPL28-210ENST00000560583 HSD17B13Q7Z5P4 300 aaPredicted RBP13.35□□□□□ -0.27
RPL28-210ENST00000560583 LHFPL1Q86WI0 220 aa13.35□□□□□ -0.27
RPL28-210ENST00000560583 OR13C8Q8NGS7 320 aa13.35□□□□□ -0.27
RPL28-210ENST00000560583 THYN1Q9P016 225 aa13.35□□□□□ -0.27
RPL28-210ENST00000560583 F8W735 103 aaPredicted RBP13.34□□□□□ -0.27
RPL28-210ENST00000560583 TGOLN2O43493 480 aa13.34□□□□□ -0.27
RPL28-210ENST00000560583 OR13C7P0DN81 318 aa13.34□□□□□ -0.27
RPL28-210ENST00000560583 PLET1Q6UQ28 207 aa13.34□□□□□ -0.27
RPL28-210ENST00000560583 OR4C16Q8NGL9 310 aa13.34□□□□□ -0.27
RPL28-210ENST00000560583 MARCH1Q8TCQ1 289 aa13.34□□□□□ -0.27
RPL28-210ENST00000560583 VN1R17PQ8TDU5 208 aa13.34□□□□□ -0.27
RPL28-210ENST00000560583 LSM10Q969L4 123 aaKnown RBP13.34□□□□□ -0.27
RPL28-210ENST00000560583 MARC2Q969Z3 335 aa13.34□□□□□ -0.27
RPL28-210ENST00000560583 MRGPRFQ96AM1 343 aa13.34□□□□□ -0.27
RPL28-210ENST00000560583 ZNF414Q96IQ9 312 aa13.34□□□□□ -0.27
RPL28-210ENST00000560583 TMEM56Q96MV1 263 aa13.34□□□□□ -0.27
RPL28-210ENST00000560583 GGTLC1Q9BX51 225 aa13.34□□□□□ -0.27
RPL28-210ENST00000560583 NDUFA4L2Q9NRX3 87 aa13.34□□□□□ -0.27
RPL28-210ENST00000560583 C3orf85A0A1B0GTC6 90 aa13.33□□□□□ -0.28
RPL28-210ENST00000560583 OR2T8A6NH00 312 aa13.33□□□□□ -0.28
RPL28-210ENST00000560583 ELLP55199 621 aaPredicted RBP13.33□□□□□ -0.28
RPL28-210ENST00000560583 PYDC2Q56P42 97 aa13.33□□□□□ -0.28
RPL28-210ENST00000560583 PRRT1Q99946 306 aa13.33□□□□□ -0.28
RPL28-210ENST00000560583 OVOL2Q9BRP0 275 aa13.33□□□□□ -0.28
RPL28-210ENST00000560583 MCUBQ9NWR8 336 aa13.33□□□□□ -0.28
RPL28-210ENST00000560583 MRPL27Q9P0M9 148 aaKnown RBP13.33□□□□□ -0.28
RPL28-210ENST00000560583 UFC1Q9Y3C8 167 aa13.33□□□□□ -0.28
RPL28-210ENST00000560583 IGHV3-21A0A0B4J1V1 117 aa13.32□□□□□ -0.28
RPL28-210ENST00000560583 TRAV25A0A0B4J276 109 aa13.32□□□□□ -0.28
RPL28-210ENST00000560583 TEX13DA0A0J9YY54 714 aaPredicted RBP13.32□□□□□ -0.28
RPL28-210ENST00000560583 DBX1A6NMT0 343 aa13.32□□□□□ -0.28
RPL28-210ENST00000560583 C15orf61A6NNL5 157 aa13.32□□□□□ -0.28
RPL28-210ENST00000560583 GSTZ1O43708 216 aaPredicted RBP13.32□□□□□ -0.28
RPL28-210ENST00000560583 CTSDP07339 412 aaPredicted RBP13.32□□□□□ -0.28
RPL28-210ENST00000560583 SLC25A24Q6NUK1 477 aa13.32□□□□□ -0.28
RPL28-210ENST00000560583 OR1L6Q8NGR2 347 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms