RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 CXorf58Q96LI9 332 aa7.58□□□□□ -1.2
SNRPA1-212ENST00000560496 SRSF8Q9BRL6 282 aaKnown RBP7.58□□□□□ -1.2
SNRPA1-212ENST00000560496 ZNF436Q9C0F3 470 aaPredicted RBP7.58□□□□□ -1.2
SNRPA1-212ENST00000560496 PLEKHA2Q9HB19 425 aa7.58□□□□□ -1.2
SNRPA1-212ENST00000560496 HRASLSQ9HDD0 168 aa7.58□□□□□ -1.2
SNRPA1-212ENST00000560496 HECTD4Q9Y4D8 3996 aa7.58□□□□□ -1.2
SNRPA1-212ENST00000560496 IGHV3-35A0A0C4DH35 117 aa7.57□□□□□ -1.2
SNRPA1-212ENST00000560496 MARCH11A6NNE9 402 aa7.57□□□□□ -1.2
SNRPA1-212ENST00000560496 TGOLN2O43493 480 aa7.57□□□□□ -1.2
SNRPA1-212ENST00000560496 SCAF4O95104 1147 aaKnown RBP7.57□□□□□ -1.2
SNRPA1-212ENST00000560496 RLN1P04808 185 aa7.57□□□□□ -1.2
SNRPA1-212ENST00000560496 DEFA4P12838 97 aa7.57□□□□□ -1.2
SNRPA1-212ENST00000560496 GNRHRP30968 328 aa7.57□□□□□ -1.2
SNRPA1-212ENST00000560496 CBX5P45973 191 aa7.57□□□□□ -1.2
SNRPA1-212ENST00000560496 MFAP2P55001 183 aa7.57□□□□□ -1.2
SNRPA1-212ENST00000560496 CTAG1AP78358 180 aa7.57□□□□□ -1.2
SNRPA1-212ENST00000560496 FAM106AQ4KMX7 169 aa7.57□□□□□ -1.2
SNRPA1-212ENST00000560496 SPANXN2Q5MJ10 180 aa7.57□□□□□ -1.2
SNRPA1-212ENST00000560496 AADACL3Q5VUY0 350 aa7.57□□□□□ -1.2
SNRPA1-212ENST00000560496 SLC16A13Q7RTY0 426 aa7.57□□□□□ -1.2
SNRPA1-212ENST00000560496 OR52B4Q8NGK2 314 aa7.57□□□□□ -1.2
SNRPA1-212ENST00000560496 OR6F1Q8NGZ6 308 aa7.57□□□□□ -1.2
SNRPA1-212ENST00000560496 MOB3AQ96BX8 217 aa7.57□□□□□ -1.2
SNRPA1-212ENST00000560496 GGTLC1Q9BX51 225 aa7.57□□□□□ -1.2
SNRPA1-212ENST00000560496 QTRT1Q9BXR0 403 aaKnown RBP7.57□□□□□ -1.2
SNRPA1-212ENST00000560496 NXF2Q9GZY0 626 aaKnown RBP7.57□□□□□ -1.2
SNRPA1-212ENST00000560496 EHFQ9NZC4 300 aa7.57□□□□□ -1.2
SNRPA1-212ENST00000560496 RABL2BQ9UNT1 228 aa7.57□□□□□ -1.2
SNRPA1-212ENST00000560496 ZNF320A2RRD8 509 aa7.56□□□□□ -1.2
SNRPA1-212ENST00000560496 XRCC3O43542 346 aa7.56□□□□□ -1.2
SNRPA1-212ENST00000560496 TMEM127O75204 238 aa7.56□□□□□ -1.2
SNRPA1-212ENST00000560496 JTBO76095 146 aa7.56□□□□□ -1.2
SNRPA1-212ENST00000560496 CLEC3BP05452 202 aa7.56□□□□□ -1.2
SNRPA1-212ENST00000560496 RPA2P15927 270 aa7.56□□□□□ -1.2
SNRPA1-212ENST00000560496 PTBP1P26599 531 aaKnown RBP eCLIP7.56□□□□□ -1.2
SNRPA1-212ENST00000560496 TAS2R20P59543 309 aa7.56□□□□□ -1.2
SNRPA1-212ENST00000560496 UBE2NLQ5JXB2 153 aa7.56□□□□□ -1.2
SNRPA1-212ENST00000560496 DMBX1Q8NFW5 382 aa7.56□□□□□ -1.2
SNRPA1-212ENST00000560496 MARC2Q969Z3 335 aa7.56□□□□□ -1.2
SNRPA1-212ENST00000560496 YIPF6Q96EC8 236 aa7.56□□□□□ -1.2
SNRPA1-212ENST00000560496 OVOL2Q9BRP0 275 aa7.56□□□□□ -1.2
SNRPA1-212ENST00000560496 COMMD5Q9GZQ3 224 aa7.56□□□□□ -1.2
SNRPA1-212ENST00000560496 IFT46Q9NQC8 304 aa7.56□□□□□ -1.2
SNRPA1-212ENST00000560496 F11RQ9Y624 299 aaKnown RBP7.56□□□□□ -1.2
SNRPA1-212ENST00000560496 TRAV25A0A0B4J276 109 aa7.55□□□□□ -1.2
SNRPA1-212ENST00000560496 OR2T8A6NH00 312 aa7.55□□□□□ -1.2
SNRPA1-212ENST00000560496 DBX1A6NMT0 343 aa7.55□□□□□ -1.2
SNRPA1-212ENST00000560496 K7EIM0 57 aa7.55□□□□□ -1.2
SNRPA1-212ENST00000560496 SERPINE2P07093 398 aa7.55□□□□□ -1.2
SNRPA1-212ENST00000560496 IL7P13232 177 aa7.55□□□□□ -1.2
SNRPA1-212ENST00000560496 F2RP25116 425 aa7.55□□□□□ -1.2
SNRPA1-212ENST00000560496 RFX2P48378 723 aa7.55□□□□□ -1.2
SNRPA1-212ENST00000560496 ELLP55199 621 aaPredicted RBP7.55□□□□□ -1.2
SNRPA1-212ENST00000560496 HERV-K104P61576 105 aa7.55□□□□□ -1.2
SNRPA1-212ENST00000560496 EWSR1Q01844 656 aaKnown RBP eCLIP7.55□□□□□ -1.2
SNRPA1-212ENST00000560496 ODF3L2Q3SX64 289 aa7.55□□□□□ -1.2
SNRPA1-212ENST00000560496 ZNF585BQ52M93 769 aa7.55□□□□□ -1.2
SNRPA1-212ENST00000560496 TCTE3Q8IZS6 198 aa7.55□□□□□ -1.2
SNRPA1-212ENST00000560496 IL17DQ8TAD2 202 aa7.55□□□□□ -1.2
SNRPA1-212ENST00000560496 CD300LFQ8TDQ1 290 aa7.55□□□□□ -1.2
SNRPA1-212ENST00000560496 VN1R17PQ8TDU5 208 aa7.55□□□□□ -1.2
SNRPA1-212ENST00000560496 FCAMRQ8WWV6 532 aa7.55□□□□□ -1.2
SNRPA1-212ENST00000560496 ZNF2Q9BSG1 426 aaPredicted RBP7.55□□□□□ -1.2
SNRPA1-212ENST00000560496 CHRDL1Q9BU40 450 aa7.55□□□□□ -1.2
SNRPA1-212ENST00000560496 SLIRPQ9GZT3 109 aaKnown RBP7.55□□□□□ -1.2
SNRPA1-212ENST00000560496 NAA50Q9GZZ1 169 aaKnown RBP7.55□□□□□ -1.2
SNRPA1-212ENST00000560496 NDUFA4L2Q9NRX3 87 aa7.55□□□□□ -1.2
SNRPA1-212ENST00000560496 MRPL27Q9P0M9 148 aaKnown RBP7.55□□□□□ -1.2
SNRPA1-212ENST00000560496 NSG2Q9Y328 171 aa7.55□□□□□ -1.2
SNRPA1-212ENST00000560496 UFC1Q9Y3C8 167 aa7.55□□□□□ -1.2
SNRPA1-212ENST00000560496 LOC102724200A0A096LPH7 203 aaPredicted RBP7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 TEX50A0A1B0GTY4 177 aa7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 C15orf61A6NNL5 157 aa7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 TSPAN4O14817 238 aa7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 PGLYRP1O75594 196 aaPredicted RBP7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 PMP2P02689 132 aa7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 OR13C7P0DN81 318 aa7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 ADMP35318 185 aa7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 G6PCP35575 357 aa7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 ERVK-16P61578 105 aa7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 S100A12P80511 92 aa7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 TMEM69Q5SWH9 247 aa7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 PLET1Q6UQ28 207 aa7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 DHRS11Q6UWP2 260 aa7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 HSD17B13Q7Z5P4 300 aaPredicted RBP7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 NOXA1Q86UR1 476 aa7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 OR1L6Q8NGR2 347 aa7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 ZFAND1Q8TCF1 268 aa7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 LSM10Q969L4 123 aaKnown RBP7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 BSCL2Q96G97 398 aaPredicted RBP7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 ATP6V0BQ99437 205 aa7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 SPAG8Q99932 426 aaPredicted RBP7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 DAZ1Q9NQZ3 744 aaKnown RBP7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 THYN1Q9P016 225 aa7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 RABL2AQ9UBK7 228 aaPredicted RBP7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 UBQLN2Q9UHD9 624 aa7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 TMA7Q9Y2S6 64 aaKnown RBP7.54□□□□□ -1.2
SNRPA1-212ENST00000560496 IGHV3-21A0A0B4J1V1 117 aa7.53□□□□□ -1.2
SNRPA1-212ENST00000560496 NDUFA4O00483 81 aa7.53□□□□□ -1.2
SNRPA1-212ENST00000560496 EIF4EP06730 217 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms