RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 TXN2Q99757 166 aa6.77□□□□□ -1.33
HDDC3-204ENST00000559834 CHRDL1Q9BU40 450 aa6.77□□□□□ -1.33
HDDC3-204ENST00000559834 RHPN1-AS1Q9BWJ2 59 aa6.77□□□□□ -1.33
HDDC3-204ENST00000559834 AUNIPQ9H7T9 357 aa6.77□□□□□ -1.33
HDDC3-204ENST00000559834 IFT46Q9NQC8 304 aa6.77□□□□□ -1.33
HDDC3-204ENST00000559834 PRNDQ9UKY0 176 aa6.77□□□□□ -1.33
HDDC3-204ENST00000559834 RAB26Q9ULW5 256 aa6.77□□□□□ -1.33
HDDC3-204ENST00000559834 OR51B2Q9Y5P1 312 aa6.77□□□□□ -1.33
HDDC3-204ENST00000559834 STARD9Q9P2P6 4700 aa6.76□□□□□ -1.33
HDDC3-204ENST00000559834 IGHV3OR16-8A0A075B7F1 116 aa6.76□□□□□ -1.33
HDDC3-204ENST00000559834 TRAV14DV4A0A0A6YYC5 116 aa6.76□□□□□ -1.33
HDDC3-204ENST00000559834 IGHV3-21A0A0B4J1V1 117 aa6.76□□□□□ -1.33
HDDC3-204ENST00000559834 IGHV7-4-1A0A0J9YVY3 117 aa6.76□□□□□ -1.33
HDDC3-204ENST00000559834 K7EIM0 57 aa6.76□□□□□ -1.33
HDDC3-204ENST00000559834 CHEK1O14757 476 aa6.76□□□□□ -1.33
HDDC3-204ENST00000559834 ZNF207O43670 478 aaKnown RBP6.76□□□□□ -1.33
HDDC3-204ENST00000559834 PGLYRP1O75594 196 aaPredicted RBP6.76□□□□□ -1.33
HDDC3-204ENST00000559834 FCER2P06734 321 aa6.76□□□□□ -1.33
HDDC3-204ENST00000559834 CTSGP08311 255 aa6.76□□□□□ -1.33
HDDC3-204ENST00000559834 S100GP29377 79 aa6.76□□□□□ -1.33
HDDC3-204ENST00000559834 MFAP4P55083 255 aa6.76□□□□□ -1.33
HDDC3-204ENST00000559834 TCTAP57738 103 aa6.76□□□□□ -1.33
HDDC3-204ENST00000559834 MXD1Q05195 221 aa6.76□□□□□ -1.33
HDDC3-204ENST00000559834 RBMS2Q15434 407 aaKnown RBP6.76□□□□□ -1.33
HDDC3-204ENST00000559834 APRG1Q8IVJ8 170 aa6.76□□□□□ -1.33
HDDC3-204ENST00000559834 OR5H6Q8NGV6 325 aa6.76□□□□□ -1.33
HDDC3-204ENST00000559834 OR1P1Q8NH06 330 aa6.76□□□□□ -1.33
HDDC3-204ENST00000559834 DGCR14Q96DF8 476 aaKnown RBP6.76□□□□□ -1.33
HDDC3-204ENST00000559834 S100A16Q96FQ6 103 aaKnown RBP6.76□□□□□ -1.33
HDDC3-204ENST00000559834 RNF2Q99496 336 aa6.76□□□□□ -1.33
HDDC3-204ENST00000559834 YTHDF1Q9BYJ9 559 aaKnown RBP6.76□□□□□ -1.33
HDDC3-204ENST00000559834 EHFQ9NZC4 300 aa6.76□□□□□ -1.33
HDDC3-204ENST00000559834 XRCC3O43542 346 aa6.75□□□□□ -1.33
HDDC3-204ENST00000559834 RLN1P04808 185 aa6.75□□□□□ -1.33
HDDC3-204ENST00000559834 EIF4EP06730 217 aaKnown RBP6.75□□□□□ -1.33
HDDC3-204ENST00000559834 CLEC2LP0C7M8 214 aa6.75□□□□□ -1.33
HDDC3-204ENST00000559834 SMIM18P0DKX4 95 aa6.75□□□□□ -1.33
HDDC3-204ENST00000559834 FCGR2BP31994 310 aaPredicted RBP6.75□□□□□ -1.33
HDDC3-204ENST00000559834 G6PCP35575 357 aa6.75□□□□□ -1.33
HDDC3-204ENST00000559834 TFPI2P48307 235 aa6.75□□□□□ -1.33
HDDC3-204ENST00000559834 RFX2P48378 723 aa6.75□□□□□ -1.33
HDDC3-204ENST00000559834 MFAP2P55001 183 aa6.75□□□□□ -1.33
HDDC3-204ENST00000559834 LPCAT3Q6P1A2 487 aa6.75□□□□□ -1.33
HDDC3-204ENST00000559834 OR6F1Q8NGZ6 308 aa6.75□□□□□ -1.33
HDDC3-204ENST00000559834 OR11H2Q8NH07 326 aa6.75□□□□□ -1.33
HDDC3-204ENST00000559834 FCAMRQ8WWV6 532 aa6.75□□□□□ -1.33
HDDC3-204ENST00000559834 SLC25A46Q96AG3 418 aa6.75□□□□□ -1.33
HDDC3-204ENST00000559834 SLC25A38Q96DW6 304 aa6.75□□□□□ -1.33
HDDC3-204ENST00000559834 OR10C1Q96KK4 312 aa6.75□□□□□ -1.33
HDDC3-204ENST00000559834 ZNF2Q9BSG1 426 aaPredicted RBP6.75□□□□□ -1.33
HDDC3-204ENST00000559834 Q9H521 79 aa6.75□□□□□ -1.33
HDDC3-204ENST00000559834 NSG2Q9Y328 171 aa6.75□□□□□ -1.33
HDDC3-204ENST00000559834 HYDINQ4G0P3 5121 aa6.74□□□□□ -1.33
HDDC3-204ENST00000559834 IGKV3-7A0A075B6H7 116 aa6.74□□□□□ -1.33
HDDC3-204ENST00000559834 LOC100506127A0A0U1RQW1 187 aa6.74□□□□□ -1.33
HDDC3-204ENST00000559834 F8W735 103 aaPredicted RBP6.74□□□□□ -1.33
HDDC3-204ENST00000559834 DNASE2O00115 360 aaPredicted RBP6.74□□□□□ -1.33
HDDC3-204ENST00000559834 GPR31O00270 319 aa6.74□□□□□ -1.33
HDDC3-204ENST00000559834 GNG7O60262 68 aa6.74□□□□□ -1.33
HDDC3-204ENST00000559834 DEDDO75618 318 aa6.74□□□□□ -1.33
HDDC3-204ENST00000559834 DFFBO76075 338 aa6.74□□□□□ -1.33
HDDC3-204ENST00000559834 TAS2R46P59540 309 aa6.74□□□□□ -1.33
HDDC3-204ENST00000559834 NANOS2P60321 138 aaKnown RBP6.74□□□□□ -1.33
HDDC3-204ENST00000559834 ERHP84090 104 aaKnown RBP6.74□□□□□ -1.33
HDDC3-204ENST00000559834 TMEM187Q14656 261 aa6.74□□□□□ -1.33
HDDC3-204ENST00000559834 CROCCP3Q8IVE0 287 aa6.74□□□□□ -1.33
HDDC3-204ENST00000559834 CENPSQ8N2Z9 138 aa6.74□□□□□ -1.33
HDDC3-204ENST00000559834 GBGT1Q8N5D6 347 aa6.74□□□□□ -1.33
HDDC3-204ENST00000559834 OR5H2Q8NGV7 314 aa6.74□□□□□ -1.33
HDDC3-204ENST00000559834 C2CD4CQ8TF44 421 aa6.74□□□□□ -1.33
HDDC3-204ENST00000559834 MOB3AQ96BX8 217 aa6.74□□□□□ -1.33
HDDC3-204ENST00000559834 MISP3Q96FF7 219 aa6.74□□□□□ -1.33
HDDC3-204ENST00000559834 LYSTQ99698 3801 aa6.74□□□□□ -1.33
HDDC3-204ENST00000559834 GINS3Q9BRX5 216 aa6.74□□□□□ -1.33
HDDC3-204ENST00000559834 C11orf68Q9H3H3 251 aaKnown RBP6.74□□□□□ -1.33
HDDC3-204ENST00000559834 FAM212BQ9NTI7 297 aaPredicted RBP6.74□□□□□ -1.33
HDDC3-204ENST00000559834 TMEM14BQ9NUH8 114 aa6.74□□□□□ -1.33
HDDC3-204ENST00000559834 FBXL17Q9UF56 701 aa6.74□□□□□ -1.33
HDDC3-204ENST00000559834 IGHV3-49A0A0A0MS15 119 aa6.73□□□□□ -1.33
HDDC3-204ENST00000559834 MEIS3P1A6NDR6 274 aa6.73□□□□□ -1.33
HDDC3-204ENST00000559834 C11orf94C9JXX5 98 aa6.73□□□□□ -1.33
HDDC3-204ENST00000559834 PMP2P02689 132 aa6.73□□□□□ -1.33
HDDC3-204ENST00000559834 NPBWR1P48145 328 aa6.73□□□□□ -1.33
HDDC3-204ENST00000559834 RPL11P62913 178 aaKnown RBP6.73□□□□□ -1.33
HDDC3-204ENST00000559834 FAM90A2PQ658T7 463 aa6.73□□□□□ -1.33
HDDC3-204ENST00000559834 TCF24Q7RTU0 167 aa6.73□□□□□ -1.33
HDDC3-204ENST00000559834 H2BFWTQ7Z2G1 175 aa6.73□□□□□ -1.33
HDDC3-204ENST00000559834 DUSP18Q8NEJ0 188 aa6.73□□□□□ -1.33
HDDC3-204ENST00000559834 OR4A16Q8NH70 328 aa6.73□□□□□ -1.33
HDDC3-204ENST00000559834 KRTAP17-1Q9BYP8 105 aa6.73□□□□□ -1.33
HDDC3-204ENST00000559834 NXF2Q9GZY0 626 aaKnown RBP6.73□□□□□ -1.33
HDDC3-204ENST00000559834 TRAV2A0A0B4J234 112 aa6.72□□□□□ -1.33
HDDC3-204ENST00000559834 C15orf61A6NNL5 157 aa6.72□□□□□ -1.33
HDDC3-204ENST00000559834 I3L2K1 104 aa6.72□□□□□ -1.33
HDDC3-204ENST00000559834 ST8SIA3O43173 380 aa6.72□□□□□ -1.33
HDDC3-204ENST00000559834 MT-CO2P00403 227 aa6.72□□□□□ -1.33
HDDC3-204ENST00000559834 CA1P00915 261 aaPredicted RBP6.72□□□□□ -1.33
HDDC3-204ENST00000559834 NAT1P18440 290 aa6.72□□□□□ -1.33
HDDC3-204ENST00000559834 PRSS3P35030 304 aa6.72□□□□□ -1.33
HDDC3-204ENST00000559834 TSPAN5P62079 268 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms