RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 OR51J1Q9H342 316 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 C19orf12Q9NSK7 152 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 USE1Q9NZ43 259 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 CYB5R1Q9UHQ9 305 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 ORC6Q9Y5N6 252 aa3.86□□□□□ -1.79
RTF1-204ENST00000558117 TRAV27A0A087WT01 109 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 A0A0G2JRQ6 117 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 LOC100130705A0A1B0GUX0 176 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 ANKRD20A5PA0PJZ0 165 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 IZUMO1RA6ND01 250 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 K7EMT4 169 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 DENRO43583 198 aaKnown RBP3.85□□□□□ -1.79
RTF1-204ENST00000558117 TFF1P04155 84 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 FMO3P31513 532 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 HSPA13P48723 471 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 MED21Q13503 144 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 GINS1Q14691 196 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 ZNF79Q15937 498 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 ZNF726P1Q15940 193 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 TAL2Q16559 108 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 HIST3H3Q16695 136 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 MINOS1Q5TGZ0 78 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 KDM4DQ6B0I6 523 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 TTC33Q6PID6 262 aaPredicted RBP3.85□□□□□ -1.79
RTF1-204ENST00000558117 MBOAT2Q6ZWT7 520 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 DCXRQ7Z4W1 244 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 SLC35E3Q7Z769 313 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 PPP1R27Q86WC6 154 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 CBLN2Q8IUK8 224 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 CHCHD10Q8WYQ3 142 aaPredicted RBP3.85□□□□□ -1.79
RTF1-204ENST00000558117 C12orf43Q96C57 262 aaKnown RBP3.85□□□□□ -1.79
RTF1-204ENST00000558117 GAFA1Q96PS6 74 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 GABARAPL1Q9H0R8 117 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 POLR2J3Q9H1A7 115 aaKnown RBP3.85□□□□□ -1.79
RTF1-204ENST00000558117 Q9H521 79 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 PLEKHA1Q9HB21 404 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 TVP23BQ9NYZ1 205 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 OR1A1Q9P1Q5 309 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 RAB26Q9ULW5 256 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 UGT2A1Q9Y4X1 527 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 MINOS1-NBL1R4GNA1 71 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 HSPE1-MOB4S4R3N1 261 aa3.85□□□□□ -1.79
RTF1-204ENST00000558117 IGKV1D-42A0A075B6H8 117 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 A0A0B4J2E0 115 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 A0A1B0GX12 115 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 EFCAB9A8MZ26 197 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 LINC01619G3V211 115 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 H0YJX3 145 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 CDC42EP2O14613 210 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 TGOLN2O43493 480 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 OR2T1O43869 369 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 CD7P09564 240 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 P0C879 139 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 PGA4P0DJD7 388 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 PGA3P0DJD8 388 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 CCL3L1P16619 93 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 RAB4AP20338 218 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 GPX4P36969 197 aaPredicted RBP3.84□□□□□ -1.79
RTF1-204ENST00000558117 OMPP47874 163 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 ZNF133P52736 654 aaPredicted RBP3.84□□□□□ -1.79
RTF1-204ENST00000558117 RPL32P62910 135 aaKnown RBP3.84□□□□□ -1.79
RTF1-204ENST00000558117 ZNF92Q03936 586 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 CD47Q08722 323 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 TPBGQ13641 420 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 PTGES3Q15185 160 aaKnown RBP3.84□□□□□ -1.79
RTF1-204ENST00000558117 ACTL10Q5JWF8 245 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 C9orf129Q5T035 196 aaKnown RBP3.84□□□□□ -1.79
RTF1-204ENST00000558117 LAIR2Q6ISS4 152 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 WDR82Q6UXN9 313 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 C2orf66Q6UXQ4 117 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 SSX6Q7RTT6 188 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 C8orf59Q8N0T1 100 aaPredicted RBP3.84□□□□□ -1.79
RTF1-204ENST00000558117 C5orf56Q8N8D9 126 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 ZNF738Q8NE65 137 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 DUSP18Q8NEJ0 188 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 BPIFB6Q8NFQ5 453 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 OR8D4Q8NGM9 314 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 EEF1AKMT3Q96AZ1 226 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 SGTBQ96EQ0 304 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 SLC25A44Q96H78 314 aaPredicted RBP3.84□□□□□ -1.79
RTF1-204ENST00000558117 MICU1Q9BPX6 476 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 TSSK6Q9BXA6 273 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 KRTAP4-4Q9BYR3 166 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 SELENOIQ9C0D9 397 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 ZNF391Q9UJN7 358 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 MED31Q9Y3C7 131 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 WSB1Q9Y6I7 421 aa3.84□□□□□ -1.79
RTF1-204ENST00000558117 LPAP08519 4548 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 OR11H12B2RN74 326 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 H0Y9J4 135 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 PLPP3O14495 311 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 CHP2O43745 196 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 ENTPD6O75354 484 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 ADAP1O75689 374 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 CD74P04233 296 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 COX5BP10606 129 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 PSKH1P11801 424 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 HLA-GP17693 338 aa3.83□□□□□ -1.8
RTF1-204ENST00000558117 IGFBP3P17936 291 aaPredicted RBP3.83□□□□□ -1.8
RTF1-204ENST00000558117 BRS3P32247 399 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms