RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 C11orf42Q8N5U0 333 aa6.84□□□□□ -1.31
PRKAB1-207ENST00000542698 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.84□□□□□ -1.31
PRKAB1-207ENST00000542698 ZNF596Q8TC21 504 aa6.84□□□□□ -1.31
PRKAB1-207ENST00000542698 AGMATQ9BSE5 352 aa6.84□□□□□ -1.31
PRKAB1-207ENST00000542698 CACNA1BQ00975 2339 aa6.84□□□□□ -1.31
PRKAB1-207ENST00000542698 GNG7O60262 68 aa6.84□□□□□ -1.31
PRKAB1-207ENST00000542698 IGHV2-70P01814 119 aa6.84□□□□□ -1.31
PRKAB1-207ENST00000542698 FOXL1Q12952 345 aa6.84□□□□□ -1.31
PRKAB1-207ENST00000542698 C19orf35Q6ZS72 473 aa6.84□□□□□ -1.31
PRKAB1-207ENST00000542698 MRPL32Q9BYC8 188 aaKnown RBP6.84□□□□□ -1.31
PRKAB1-207ENST00000542698 IFI27L2Q9H2X8 130 aa6.84□□□□□ -1.31
PRKAB1-207ENST00000542698 WASHC3Q9Y3C0 194 aa6.84□□□□□ -1.31
PRKAB1-207ENST00000542698 C2orf16Q68DN1 1984 aa6.84□□□□□ -1.31
PRKAB1-207ENST00000542698 LTBP2Q14767 1821 aa6.84□□□□□ -1.31
PRKAB1-207ENST00000542698 CBY3A6NI87 242 aa6.84□□□□□ -1.32
PRKAB1-207ENST00000542698 ZNF785A8K8V0 405 aa6.84□□□□□ -1.32
PRKAB1-207ENST00000542698 PFN1P07737 140 aaKnown RBP6.84□□□□□ -1.32
PRKAB1-207ENST00000542698 SP9P0CG40 484 aa6.84□□□□□ -1.32
PRKAB1-207ENST00000542698 STAG3L2P0CL84 134 aa6.84□□□□□ -1.32
PRKAB1-207ENST00000542698 STAG3L3P0CL85 134 aa6.84□□□□□ -1.32
PRKAB1-207ENST00000542698 CA7P43166 264 aa6.84□□□□□ -1.32
PRKAB1-207ENST00000542698 TMEM30BQ3MIR4 351 aa6.84□□□□□ -1.32
PRKAB1-207ENST00000542698 OSR1Q8TAX0 266 aaPredicted RBP6.84□□□□□ -1.32
PRKAB1-207ENST00000542698 DIRC2Q96SL1 478 aa6.84□□□□□ -1.32
PRKAB1-207ENST00000542698 MBNL3Q9NUK0 354 aaKnown RBP6.84□□□□□ -1.32
PRKAB1-207ENST00000542698 TBL2Q9Y4P3 447 aaKnown RBP6.84□□□□□ -1.32
PRKAB1-207ENST00000542698 LY6G6EA0A0G2JKS1 128 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 TEX50A0A1B0GTY4 177 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 FAM157AC9JC47 383 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 SIAH2O43255 324 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 SS18L1O75177 396 aaPredicted RBP6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 CLEC3BP05452 202 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 ADMP35318 185 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 CEACAM3P40198 252 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 HINT1P49773 126 aaPredicted RBP6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 LINC00205P59089 165 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 C1orf185Q5T7R7 199 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 FAM90A1Q86YD7 464 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 C9orf106Q8NAJ2 232 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 FAM222BQ8WU58 562 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 EAF1Q96JC9 268 aaPredicted RBP6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 DERL1Q9BUN8 251 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 GGTLC1Q9BX51 225 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 ZNF71Q9NQZ8 489 aaPredicted RBP6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 U3KQA8 63 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 PRR14LQ5THK1 2151 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 NDUFS6O75380 124 aaKnown RBP6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 OR4A8P0C604 315 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 FCER1GP30273 86 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 MAS1LP35410 378 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 RPL11P62913 178 aaKnown RBP6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 ATOH7Q8N100 152 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 C5orf17Q8NAS9 161 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 ZNF738Q8NE65 137 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 CACNG8Q8WXS5 425 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 C14orf144Q96I85 54 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 RBM14Q96PK6 669 aaKnown RBP6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 MRPL37Q9BZE1 423 aaKnown RBP6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 PPP1R14DQ9NXH3 145 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 SPRR3Q9UBC9 169 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 HSPB8Q9UJY1 196 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 HIGD1AQ9Y241 93 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 C15orf61A6NNL5 157 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 LINC00473A8K010 186 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 CORTO00230 105 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 LEPROTL1O95214 131 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 CD3EP07766 207 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 FTH1P19P0C7X4 201 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 GZMBP10144 247 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 TIMP3P35625 211 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 PRNTQ86SH4 94 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 OR52E5Q8NH55 327 aa6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 PARD6GQ9BYG4 376 aaPredicted RBP6.83□□□□□ -1.32
PRKAB1-207ENST00000542698 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.82□□□□□ -1.321e-7■■■■□ 21.9
PRKAB1-207ENST00000542698 PPIHO43447 177 aaKnown RBP6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 IGKV1-39P01597 117 aa6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 IGKV1D-39P04432 117 aa6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 FAM87AP0C7U9 286 aa6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 GBGT1Q8N5D6 347 aa6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 FAM216BQ8N7L0 139 aa6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 Q8NFD4 153 aa6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 TMEM186Q96B77 213 aa6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 RNASE7Q9H1E1 156 aaKnown RBP6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 FAM90A9PA6NNJ1 464 aa6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 MMDQ15546 238 aa6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 TMEM256Q8N2U0 113 aa6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 ZNF664Q8N3J9 261 aa6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 PRR7Q8TB68 274 aa6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 WNT10AQ9GZT5 417 aa6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 SAA2-SAA4A0A096LPE2 208 aa6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 A0A1W2PRD5 423 aa6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 A0A1W2PRF3 423 aa6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 A0A1W2PRM7 423 aa6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 C15orf62A8K5M9 175 aa6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 TM4SF5O14894 197 aa6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 REG1AP05451 166 aa6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 NBEAP1P0C6P0 100 aa6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 SAA2P0DJI9 122 aaPredicted RBP6.82□□□□□ -1.32
PRKAB1-207ENST00000542698 TMEM177Q53S58 311 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms