RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 HINT2Q9BX68 163 aa10.09□□□□□ -0.79
CHFR-216ENST00000538235 COMMD5Q9GZQ3 224 aa10.09□□□□□ -0.79
CHFR-216ENST00000538235 SLA2Q9H6Q3 261 aa10.09□□□□□ -0.79
CHFR-216ENST00000538235 ZFP57Q9NU63 452 aa10.09□□□□□ -0.79
CHFR-216ENST00000538235 PRNDQ9UKY0 176 aa10.09□□□□□ -0.79
CHFR-216ENST00000538235 ZNF257Q9Y2Q1 563 aa10.09□□□□□ -0.79
CHFR-216ENST00000538235 MEGF8Q7Z7M0 2845 aa10.08□□□□□ -0.8
CHFR-216ENST00000538235 A0A0B4J2A0 478 aa10.08□□□□□ -0.8
CHFR-216ENST00000538235 CENPXA8MT69 81 aa10.08□□□□□ -0.8
CHFR-216ENST00000538235 F8W735 103 aaPredicted RBP10.08□□□□□ -0.8
CHFR-216ENST00000538235 H3BUA1 57 aa10.08□□□□□ -0.8
CHFR-216ENST00000538235 B3GALNT1O75752 331 aa10.08□□□□□ -0.8
CHFR-216ENST00000538235 IGHV3-23P01764 117 aa10.08□□□□□ -0.8
CHFR-216ENST00000538235 HLA-AP01891 365 aaKnown RBP10.08□□□□□ -0.8
CHFR-216ENST00000538235 OR13C7P0DN81 318 aa10.08□□□□□ -0.8
CHFR-216ENST00000538235 MECP2P51608 486 aaKnown RBP10.08□□□□□ -0.8
CHFR-216ENST00000538235 SLURP1P55000 103 aa10.08□□□□□ -0.8
CHFR-216ENST00000538235 RUNX1Q01196 453 aa10.08□□□□□ -0.8
CHFR-216ENST00000538235 LYG2Q86SG7 212 aa10.08□□□□□ -0.8
CHFR-216ENST00000538235 OR5B3Q8NH48 314 aa10.08□□□□□ -0.8
CHFR-216ENST00000538235 LSM10Q969L4 123 aaKnown RBP10.08□□□□□ -0.8
CHFR-216ENST00000538235 AIFM2Q9BRQ8 373 aa10.08□□□□□ -0.8
CHFR-216ENST00000538235 ZNF355PQ9NSJ1 428 aa10.08□□□□□ -0.8
CHFR-216ENST00000538235 SHPKQ9UHJ6 478 aa10.08□□□□□ -0.8
CHFR-216ENST00000538235 IGHV3-21A0A0B4J1V1 117 aa10.07□□□□□ -0.8
CHFR-216ENST00000538235 PITX3O75364 302 aa10.07□□□□□ -0.8
CHFR-216ENST00000538235 SNAPC5O75971 98 aa10.07□□□□□ -0.8
CHFR-216ENST00000538235 HSPE1P61604 102 aaKnown RBP10.07□□□□□ -0.8
CHFR-216ENST00000538235 TMEM65Q6PI78 240 aa10.07□□□□□ -0.8
CHFR-216ENST00000538235 LGI3Q8N145 548 aa10.07□□□□□ -0.8
CHFR-216ENST00000538235 OR2C3Q8N628 320 aa10.07□□□□□ -0.8
CHFR-216ENST00000538235 OR4A16Q8NH70 328 aa10.07□□□□□ -0.8
CHFR-216ENST00000538235 TMEM68Q96MH6 324 aa10.07□□□□□ -0.8
CHFR-216ENST00000538235 ANKRD34BA5PLL1 514 aa10.06□□□□□ -0.8
CHFR-216ENST00000538235 G3V4G9 280 aa10.06□□□□□ -0.8
CHFR-216ENST00000538235 K7EIM0 57 aa10.06□□□□□ -0.8
CHFR-216ENST00000538235 CCL24O00175 119 aa10.06□□□□□ -0.8
CHFR-216ENST00000538235 CCNKO75909 580 aa10.06□□□□□ -0.8
CHFR-216ENST00000538235 RNASE2P10153 161 aaKnown RBP10.06□□□□□ -0.8
CHFR-216ENST00000538235 EDN2P20800 178 aa10.06□□□□□ -0.8
CHFR-216ENST00000538235 EXOSC2Q13868 293 aaKnown RBP10.06□□□□□ -0.8
CHFR-216ENST00000538235 BSXQ3C1V8 233 aa10.06□□□□□ -0.8
CHFR-216ENST00000538235 GGNBP1Q5YKI7 109 aa10.06□□□□□ -0.8
CHFR-216ENST00000538235 ZNF343Q6P1L6 599 aa10.06□□□□□ -0.8
CHFR-216ENST00000538235 C1QL4Q86Z23 238 aa10.06□□□□□ -0.8
CHFR-216ENST00000538235 OR11H1Q8NG94 326 aa10.06□□□□□ -0.8
CHFR-216ENST00000538235 OR4F17Q8NGA8 305 aa10.06□□□□□ -0.8
CHFR-216ENST00000538235 OR4F4Q96R69 305 aa10.06□□□□□ -0.8
CHFR-216ENST00000538235 MRPL36Q9P0J6 103 aaKnown RBP10.06□□□□□ -0.8
CHFR-216ENST00000538235 F11RQ9Y624 299 aaKnown RBP10.06□□□□□ -0.8
CHFR-216ENST00000538235 PRKDCP78527 4128 aaKnown RBP10.05□□□□□ -0.8
CHFR-216ENST00000538235 FAM240BA0A1B0GVZ2 78 aa10.05□□□□□ -0.8
CHFR-216ENST00000538235 PPP5D1E7EU14 171 aa10.05□□□□□ -0.8
CHFR-216ENST00000538235 BMPR1BO00238 502 aa10.05□□□□□ -0.8
CHFR-216ENST00000538235 CCSO14618 274 aa10.05□□□□□ -0.8
CHFR-216ENST00000538235 HOXB5P09067 269 aa10.05□□□□□ -0.8
CHFR-216ENST00000538235 H2AFB2P0C5Z0 115 aa10.05□□□□□ -0.8
CHFR-216ENST00000538235 IGLL1P15814 213 aa10.05□□□□□ -0.8
CHFR-216ENST00000538235 M6PRP20645 277 aa10.05□□□□□ -0.8
CHFR-216ENST00000538235 C15orf32Q32M92 178 aa10.05□□□□□ -0.8
CHFR-216ENST00000538235 PDLIM3Q53GG5 364 aaPredicted RBP10.05□□□□□ -0.8
CHFR-216ENST00000538235 OXLD1Q5BKU9 147 aa10.05□□□□□ -0.8
CHFR-216ENST00000538235 PVRIGQ6DKI7 326 aa10.05□□□□□ -0.8
CHFR-216ENST00000538235 ZNF114Q8NC26 417 aa10.05□□□□□ -0.8
CHFR-216ENST00000538235 WFDC9Q8NEX5 89 aa10.05□□□□□ -0.8
CHFR-216ENST00000538235 RNASE11Q8TAA1 199 aaKnown RBP10.05□□□□□ -0.8
CHFR-216ENST00000538235 RRNAD1Q96FB5 475 aaKnown RBP10.05□□□□□ -0.8
CHFR-216ENST00000538235 SRSF8Q9BRL6 282 aaKnown RBP10.05□□□□□ -0.8
CHFR-216ENST00000538235 FBXL7Q9UJT9 491 aa10.05□□□□□ -0.8
CHFR-216ENST00000538235 KCNIP3Q9Y2W7 256 aa10.05□□□□□ -0.8
CHFR-216ENST00000538235 INS-IGF2F8WCM5 200 aa10.04□□□□□ -0.8
CHFR-216ENST00000538235 DUS4LO95620 317 aaKnown RBP10.04□□□□□ -0.8
CHFR-216ENST00000538235 IGHV3-48P01763 117 aa10.04□□□□□ -0.8
CHFR-216ENST00000538235 SULT1A3P0DMM9 295 aa10.04□□□□□ -0.8
CHFR-216ENST00000538235 SULT1A4P0DMN0 295 aa10.04□□□□□ -0.8
CHFR-216ENST00000538235 MYCNOSP40205 109 aa10.04□□□□□ -0.8
CHFR-216ENST00000538235 SMCO1Q147U7 214 aa10.04□□□□□ -0.8
CHFR-216ENST00000538235 ZFP69Q49AA0 526 aa10.04□□□□□ -0.8
CHFR-216ENST00000538235 C4orf46Q504U0 113 aa10.04□□□□□ -0.8
CHFR-216ENST00000538235 SAMD5Q5TGI4 173 aa10.04□□□□□ -0.8
CHFR-216ENST00000538235 DUSP18Q8NEJ0 188 aa10.04□□□□□ -0.8
CHFR-216ENST00000538235 OR1N2Q8NGR9 330 aa10.04□□□□□ -0.8
CHFR-216ENST00000538235 MITD1Q8WV92 249 aa10.04□□□□□ -0.8
CHFR-216ENST00000538235 DCUN1D4Q92564 292 aa10.04□□□□□ -0.8
CHFR-216ENST00000538235 DLX4Q92988 240 aaPredicted RBP10.04□□□□□ -0.8
CHFR-216ENST00000538235 OR10C1Q96KK4 312 aa10.04□□□□□ -0.8
CHFR-216ENST00000538235 PLEKHA3Q9HB20 300 aa10.04□□□□□ -0.8
CHFR-216ENST00000538235 HSPB7Q9UBY9 170 aa10.04□□□□□ -0.8
CHFR-216ENST00000538235 DUXBA0A1W2PPF3 345 aa10.03□□□□□ -0.8
CHFR-216ENST00000538235 FAM223BA6NKX1 122 aa10.03□□□□□ -0.8
CHFR-216ENST00000538235 I3L2K1 104 aa10.03□□□□□ -0.8
CHFR-216ENST00000538235 PF4P02776 101 aa10.03□□□□□ -0.8
CHFR-216ENST00000538235 SRPXP78539 464 aa10.03□□□□□ -0.8
CHFR-216ENST00000538235 TNFRSF9Q07011 255 aa10.03□□□□□ -0.8
CHFR-216ENST00000538235 ZNF616Q08AN1 781 aa10.03□□□□□ -0.8
CHFR-216ENST00000538235 FAM223AQ8IWN6 122 aa10.03□□□□□ -0.8
CHFR-216ENST00000538235 NECAP1Q8NC96 275 aa10.03□□□□□ -0.8
CHFR-216ENST00000538235 ZNF502Q8TBZ5 544 aa10.03□□□□□ -0.8
CHFR-216ENST00000538235 WDR89Q96FK6 387 aaPredicted RBP10.03□□□□□ -0.8
CHFR-216ENST00000538235 RBKSQ9H477 322 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms