RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 CALB1P05937 261 aa1.28□□□□□ -2.2
NPM1-206ENST00000519955 HIST3H3Q16695 136 aa1.28□□□□□ -2.2
NPM1-206ENST00000519955 CDKL4Q5MAI5 379 aa1.28□□□□□ -2.2
NPM1-206ENST00000519955 AADACL3Q5VUY0 350 aa1.28□□□□□ -2.2
NPM1-206ENST00000519955 LPCAT4Q643R3 524 aa1.28□□□□□ -2.2
NPM1-206ENST00000519955 Q6ZS49 121 aa1.28□□□□□ -2.2
NPM1-206ENST00000519955 C1orf158Q8N1D5 194 aa1.28□□□□□ -2.2
NPM1-206ENST00000519955 DERL1Q9BUN8 251 aa1.28□□□□□ -2.2
NPM1-206ENST00000519955 OR5AC2Q9NZP5 309 aa1.28□□□□□ -2.2
NPM1-206ENST00000519955 TTC21AQ8NDW8 1320 aa1.28□□□□□ -2.2
NPM1-206ENST00000519955 FUOMA2VDF0 154 aa1.27□□□□□ -2.21
NPM1-206ENST00000519955 EEF1E1-BLOC1S5C9J1V9 151 aa1.27□□□□□ -2.21
NPM1-206ENST00000519955 KCNK1O00180 336 aa1.27□□□□□ -2.21
NPM1-206ENST00000519955 SHBGP04278 402 aa1.27□□□□□ -2.21
NPM1-206ENST00000519955 HIST1H2BOP23527 126 aa1.27□□□□□ -2.21
NPM1-206ENST00000519955 HIST1H2BBP33778 126 aa1.27□□□□□ -2.21
NPM1-206ENST00000519955 HIST1H2BDP58876 126 aa1.27□□□□□ -2.21
NPM1-206ENST00000519955 HIST1H2BCP62807 126 aa1.27□□□□□ -2.21
NPM1-206ENST00000519955 CDK10Q15131 360 aa1.27□□□□□ -2.21
NPM1-206ENST00000519955 HIST2H2BEQ16778 126 aa1.27□□□□□ -2.21
NPM1-206ENST00000519955 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.27□□□□□ -2.21
NPM1-206ENST00000519955 HIST2H3PS2Q5TEC6 136 aa1.27□□□□□ -2.21
NPM1-206ENST00000519955 RPL22L1Q6P5R6 122 aaKnown RBP1.27□□□□□ -2.21
NPM1-206ENST00000519955 ALKAL1Q6UXT8 129 aa1.27□□□□□ -2.21
NPM1-206ENST00000519955 ZNF565Q8N9K5 539 aa1.27□□□□□ -2.21
NPM1-206ENST00000519955 WFDC11Q8NEX6 87 aa1.27□□□□□ -2.21
NPM1-206ENST00000519955 OR51D1Q8NGF3 324 aa1.27□□□□□ -2.21
NPM1-206ENST00000519955 MRPL30Q8TCC3 161 aaKnown RBP1.27□□□□□ -2.21
NPM1-206ENST00000519955 DDI1Q8WTU0 396 aa1.27□□□□□ -2.21
NPM1-206ENST00000519955 HIST1H2BHQ93079 126 aa1.27□□□□□ -2.21
NPM1-206ENST00000519955 SLC35B4Q969S0 331 aa1.27□□□□□ -2.21
NPM1-206ENST00000519955 ODF3Q96PU9 254 aa1.27□□□□□ -2.21
NPM1-206ENST00000519955 HIST1H2BNQ99877 126 aa1.27□□□□□ -2.21
NPM1-206ENST00000519955 HIST1H2BMQ99879 126 aa1.27□□□□□ -2.21
NPM1-206ENST00000519955 TRABDQ9H4I3 376 aa1.27□□□□□ -2.21
NPM1-206ENST00000519955 TRAV14DV4A0A0A6YYC5 116 aa1.26□□□□□ -2.21
NPM1-206ENST00000519955 RNASE3P12724 160 aaKnown RBP1.26□□□□□ -2.21
NPM1-206ENST00000519955 ZNF846Q147U1 533 aa1.26□□□□□ -2.21
NPM1-206ENST00000519955 KISS1Q15726 138 aa1.26□□□□□ -2.21
NPM1-206ENST00000519955 LCN15Q6UWW0 184 aa1.26□□□□□ -2.21
NPM1-206ENST00000519955 IQCF2Q8IXL9 164 aa1.26□□□□□ -2.21
NPM1-206ENST00000519955 LRRC25Q8N386 305 aaPredicted RBP1.26□□□□□ -2.21
NPM1-206ENST00000519955 OR2T4Q8NH00 348 aa1.26□□□□□ -2.21
NPM1-206ENST00000519955 CKLFQ9UBR5 152 aa1.26□□□□□ -2.21
NPM1-206ENST00000519955 MYOFQ9NZM1 2061 aa1.26□□□□□ -2.21
NPM1-206ENST00000519955 OR5F1O95221 314 aa1.25□□□□□ -2.21
NPM1-206ENST00000519955 CTAG1AP78358 180 aa1.25□□□□□ -2.21
NPM1-206ENST00000519955 SPANXN3Q5MJ09 141 aa1.25□□□□□ -2.21
NPM1-206ENST00000519955 LINC00471Q8N535 108 aa1.25□□□□□ -2.21
NPM1-206ENST00000519955 SCGB3A1Q96QR1 104 aa1.25□□□□□ -2.21
NPM1-206ENST00000519955 OR52E6Q96RD3 313 aa1.25□□□□□ -2.21
NPM1-206ENST00000519955 INTS1Q8N201 2190 aaKnown RBP1.25□□□□□ -2.21
NPM1-206ENST00000519955 RALGAPA2Q2PPJ7 1873 aa1.24□□□□□ -2.21
NPM1-206ENST00000519955 MAST2Q6P0Q8 1798 aa1.24□□□□□ -2.21
NPM1-206ENST00000519955 HTR1AP08908 422 aa1.24□□□□□ -2.21
NPM1-206ENST00000519955 CCDC122Q5T0U0 273 aa1.24□□□□□ -2.21
NPM1-206ENST00000519955 ZNF826PQ6ZT77 177 aa1.24□□□□□ -2.21
NPM1-206ENST00000519955 DEFB128Q7Z7B8 93 aa1.24□□□□□ -2.21
NPM1-206ENST00000519955 OR13C4Q8NGS5 318 aa1.24□□□□□ -2.21
NPM1-206ENST00000519955 AQP3Q92482 292 aa1.24□□□□□ -2.21
NPM1-206ENST00000519955 KLK6Q92876 244 aa1.24□□□□□ -2.21
NPM1-206ENST00000519955 STRCQ7RTU9 1775 aa1.24□□□□□ -2.21
NPM1-206ENST00000519955 DLG5Q8TDM6 1919 aa1.23□□□□□ -2.21
NPM1-206ENST00000519955 GEMIN2O14893 280 aaKnown RBP1.23□□□□□ -2.21
NPM1-206ENST00000519955 IGKV1-5P01602 117 aa1.23□□□□□ -2.21
NPM1-206ENST00000519955 HIST1H1EP10412 219 aaKnown RBP1.23□□□□□ -2.21
NPM1-206ENST00000519955 SPCS3P61009 180 aa1.23□□□□□ -2.21
NPM1-206ENST00000519955 UBE2IP63279 158 aaKnown RBP1.23□□□□□ -2.21
NPM1-206ENST00000519955 HBA1P69905 142 aa1.23□□□□□ -2.21
NPM1-206ENST00000519955 OR2F1Q13607 317 aa1.23□□□□□ -2.21
NPM1-206ENST00000519955 DEFB115Q30KQ5 88 aa1.23□□□□□ -2.21
NPM1-206ENST00000519955 TEX36Q5VZQ5 186 aa1.23□□□□□ -2.21
NPM1-206ENST00000519955 C20orf196Q8IYI0 205 aa1.23□□□□□ -2.21
NPM1-206ENST00000519955 TMEM86BQ8N661 226 aa1.23□□□□□ -2.21
NPM1-206ENST00000519955 OR4D11Q8NGI4 311 aa1.23□□□□□ -2.21
NPM1-206ENST00000519955 PFN4Q8NHR9 129 aa1.23□□□□□ -2.21
NPM1-206ENST00000519955 PRTFDC1Q9NRG1 225 aa1.23□□□□□ -2.21
NPM1-206ENST00000519955 GUCA1BQ9UMX6 200 aa1.23□□□□□ -2.21
NPM1-206ENST00000519955 HEATR5BQ9P2D3 2071 aa1.23□□□□□ -2.21
NPM1-206ENST00000519955 PSMD12O00232 456 aaPredicted RBP1.22□□□□□ -2.21
NPM1-206ENST00000519955 IFNA5P01569 189 aa1.22□□□□□ -2.21
NPM1-206ENST00000519955 HLA-DRB1P01911 266 aa1.22□□□□□ -2.21
NPM1-206ENST00000519955 TNNC2P02585 160 aa1.22□□□□□ -2.21
NPM1-206ENST00000519955 NKX2-5P52952 324 aaPredicted RBP1.22□□□□□ -2.21
NPM1-206ENST00000519955 OR4C6Q8NH72 309 aa1.22□□□□□ -2.21
NPM1-206ENST00000519955 IMP4Q96G21 291 aaKnown RBP1.22□□□□□ -2.21
NPM1-206ENST00000519955 COMMD5Q9GZQ3 224 aa1.22□□□□□ -2.21
NPM1-206ENST00000519955 CMTM6Q9NX76 183 aa1.22□□□□□ -2.21
NPM1-206ENST00000519955 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.21□□□□□ -2.22
NPM1-206ENST00000519955 CD79AP11912 226 aa1.21□□□□□ -2.22
NPM1-206ENST00000519955 PSME3P61289 254 aa1.21□□□□□ -2.22
NPM1-206ENST00000519955 MRPL57Q9BQC6 102 aaKnown RBP1.21□□□□□ -2.22
NPM1-206ENST00000519955 FBXL12Q9NXK8 326 aa1.21□□□□□ -2.22
NPM1-206ENST00000519955 DIDO1Q9BTC0 2240 aaKnown RBP1.2□□□□□ -2.22
NPM1-206ENST00000519955 HEATR5AQ86XA9 2040 aa1.2□□□□□ -2.22
NPM1-206ENST00000519955 M0R036 132 aa1.2□□□□□ -2.22
NPM1-206ENST00000519955 SNRPD2P62316 118 aaKnown RBP1.2□□□□□ -2.22
NPM1-206ENST00000519955 C8orf74Q6P047 294 aa1.2□□□□□ -2.22
NPM1-206ENST00000519955 LPCAT3Q6P1A2 487 aa1.2□□□□□ -2.22
NPM1-206ENST00000519955 Q6ZQT0 140 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms