RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 B3GALNT1O75752 331 aa12.25□□□□□ -0.45
PDLIM5-216ENST00000511767 ARL3P36405 182 aa12.25□□□□□ -0.45
PDLIM5-216ENST00000511767 CCDC190Q86UF4 302 aa12.25□□□□□ -0.45
PDLIM5-216ENST00000511767 OR2C3Q8N628 320 aa12.25□□□□□ -0.45
PDLIM5-216ENST00000511767 SLC2A8Q9NY64 477 aa12.25□□□□□ -0.45
PDLIM5-216ENST00000511767 PEMTQ9UBM1 199 aa12.25□□□□□ -0.45
PDLIM5-216ENST00000511767 SMAD5-AS1Q9Y6J3 95 aa12.25□□□□□ -0.45
PDLIM5-216ENST00000511767 V9GYH0 126 aa12.25□□□□□ -0.45
PDLIM5-216ENST00000511767 CYB5BO43169 146 aa12.24□□□□□ -0.45
PDLIM5-216ENST00000511767 S100A5P33763 92 aa12.24□□□□□ -0.45
PDLIM5-216ENST00000511767 PRCDQ00LT1 54 aa12.24□□□□□ -0.45
PDLIM5-216ENST00000511767 CD69Q07108 199 aa12.24□□□□□ -0.45
PDLIM5-216ENST00000511767 Q6ZRM9 215 aa12.24□□□□□ -0.45
PDLIM5-216ENST00000511767 OR1L6Q8NGR2 347 aa12.24□□□□□ -0.45
PDLIM5-216ENST00000511767 SCARB1Q8WTV0 552 aa12.24□□□□□ -0.45
PDLIM5-216ENST00000511767 TMEM222Q9H0R3 208 aa12.24□□□□□ -0.45
PDLIM5-216ENST00000511767 C14orf166Q9Y224 244 aaKnown RBP12.24□□□□□ -0.45
PDLIM5-216ENST00000511767 IZUMO1RA6ND01 250 aa12.23□□□□□ -0.45
PDLIM5-216ENST00000511767 ATG12O94817 140 aa12.23□□□□□ -0.45
PDLIM5-216ENST00000511767 OR5AC1P0C628 307 aa12.23□□□□□ -0.45
PDLIM5-216ENST00000511767 FOLR2P14207 255 aa12.23□□□□□ -0.45
PDLIM5-216ENST00000511767 ETV6P41212 452 aa12.23□□□□□ -0.45
PDLIM5-216ENST00000511767 KLF9Q13886 244 aaPredicted RBP12.23□□□□□ -0.45
PDLIM5-216ENST00000511767 ZNF79Q15937 498 aa12.23□□□□□ -0.45
PDLIM5-216ENST00000511767 DEFB114Q30KQ6 69 aa12.23□□□□□ -0.45
PDLIM5-216ENST00000511767 FAM106AQ4KMX7 169 aa12.23□□□□□ -0.45
PDLIM5-216ENST00000511767 PYDC2Q56P42 97 aa12.23□□□□□ -0.45
PDLIM5-216ENST00000511767 SELENOHQ8IZQ5 122 aaKnown RBP12.23□□□□□ -0.45
PDLIM5-216ENST00000511767 Q8N402 240 aa12.23□□□□□ -0.45
PDLIM5-216ENST00000511767 OR1P1Q8NH06 330 aa12.23□□□□□ -0.45
PDLIM5-216ENST00000511767 LHFPL5Q8TAF8 219 aa12.23□□□□□ -0.45
PDLIM5-216ENST00000511767 NAA60Q9H7X0 242 aa12.23□□□□□ -0.45
PDLIM5-216ENST00000511767 SCP2D1Q9UJQ7 156 aa12.23□□□□□ -0.45
PDLIM5-216ENST00000511767 A0A0G2JRQ6 117 aa12.22□□□□□ -0.45
PDLIM5-216ENST00000511767 CRYM-AS1A6NIL9 109 aa12.22□□□□□ -0.45
PDLIM5-216ENST00000511767 C2orf70A6NJV1 201 aa12.22□□□□□ -0.45
PDLIM5-216ENST00000511767 ZNF785A8K8V0 405 aa12.22□□□□□ -0.45
PDLIM5-216ENST00000511767 K7EIM0 57 aa12.22□□□□□ -0.45
PDLIM5-216ENST00000511767 NHLRC4P0CG21 123 aaPredicted RBP12.22□□□□□ -0.45
PDLIM5-216ENST00000511767 EDN2P20800 178 aa12.22□□□□□ -0.45
PDLIM5-216ENST00000511767 ERHP84090 104 aaKnown RBP12.22□□□□□ -0.45
PDLIM5-216ENST00000511767 DHODHQ02127 395 aa12.22□□□□□ -0.45
PDLIM5-216ENST00000511767 TRIM16LQ309B1 348 aa12.22□□□□□ -0.45
PDLIM5-216ENST00000511767 TRIM63Q969Q1 353 aa12.22□□□□□ -0.45
PDLIM5-216ENST00000511767 SCGB3A2Q96PL1 93 aa12.22□□□□□ -0.45
PDLIM5-216ENST00000511767 ZC4H2Q9NQZ6 224 aa12.22□□□□□ -0.45
PDLIM5-216ENST00000511767 TMEM56-RWDD3S4R434 201 aa12.22□□□□□ -0.45
PDLIM5-216ENST00000511767 IGHV3-21A0A0B4J1V1 117 aa12.21□□□□□ -0.45
PDLIM5-216ENST00000511767 ZNF320A2RRD8 509 aa12.21□□□□□ -0.45
PDLIM5-216ENST00000511767 F8W735 103 aaPredicted RBP12.21□□□□□ -0.45
PDLIM5-216ENST00000511767 INS-IGF2F8WCM5 200 aa12.21□□□□□ -0.45
PDLIM5-216ENST00000511767 ST8SIA3O43173 380 aa12.21□□□□□ -0.45
PDLIM5-216ENST00000511767 CBLN1P23435 193 aa12.21□□□□□ -0.45
PDLIM5-216ENST00000511767 GPR183P32249 361 aa12.21□□□□□ -0.45
PDLIM5-216ENST00000511767 C11orf87Q6NUJ2 197 aa12.21□□□□□ -0.45
PDLIM5-216ENST00000511767 PLET1Q6UQ28 207 aa12.21□□□□□ -0.45
PDLIM5-216ENST00000511767 ZNF114Q8NC26 417 aa12.21□□□□□ -0.45
PDLIM5-216ENST00000511767 TMEM230Q96A57 120 aa12.21□□□□□ -0.45
PDLIM5-216ENST00000511767 RRNAD1Q96FB5 475 aaKnown RBP12.21□□□□□ -0.45
PDLIM5-216ENST00000511767 ATP6V0BQ99437 205 aa12.21□□□□□ -0.45
PDLIM5-216ENST00000511767 ASCL2Q99929 193 aa12.21□□□□□ -0.45
PDLIM5-216ENST00000511767 MCUBQ9NWR8 336 aa12.21□□□□□ -0.45
PDLIM5-216ENST00000511767 C21orf62Q9NYP8 219 aa12.21□□□□□ -0.45
PDLIM5-216ENST00000511767 KCNIP3Q9Y2W7 256 aa12.21□□□□□ -0.45
PDLIM5-216ENST00000511767 I3L2K1 104 aa12.2□□□□□ -0.46
PDLIM5-216ENST00000511767 TGOLN2O43493 480 aa12.2□□□□□ -0.46
PDLIM5-216ENST00000511767 C8orf88P0DMB2 117 aa12.2□□□□□ -0.46
PDLIM5-216ENST00000511767 AKR1C2P52895 323 aa12.2□□□□□ -0.46
PDLIM5-216ENST00000511767 TMEM187Q14656 261 aa12.2□□□□□ -0.46
PDLIM5-216ENST00000511767 CD300EQ496F6 205 aaPredicted RBP12.2□□□□□ -0.46
PDLIM5-216ENST00000511767 AARDQ4LEZ3 155 aa12.2□□□□□ -0.46
PDLIM5-216ENST00000511767 TM4SF20Q53R12 229 aa12.2□□□□□ -0.46
PDLIM5-216ENST00000511767 PVRIGQ6DKI7 326 aa12.2□□□□□ -0.46
PDLIM5-216ENST00000511767 UNQ9165/PRO28630Q6UXU0 137 aa12.2□□□□□ -0.46
PDLIM5-216ENST00000511767 SGPP2Q8IWX5 399 aa12.2□□□□□ -0.46
PDLIM5-216ENST00000511767 OR2K2Q8NGT1 345 aa12.2□□□□□ -0.46
PDLIM5-216ENST00000511767 GPR146Q96CH1 333 aa12.2□□□□□ -0.46
PDLIM5-216ENST00000511767 GALNT14Q96FL9 552 aa12.2□□□□□ -0.46
PDLIM5-216ENST00000511767 CHRDL1Q9BU40 450 aa12.2□□□□□ -0.46
PDLIM5-216ENST00000511767 ZNF436Q9C0F3 470 aaPredicted RBP12.2□□□□□ -0.46
PDLIM5-216ENST00000511767 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.2□□□□□ -0.46
PDLIM5-216ENST00000511767 IGHV3-35A0A0C4DH35 117 aa12.19□□□□□ -0.46
PDLIM5-216ENST00000511767 TMEM213A2RRL7 107 aa12.19□□□□□ -0.46
PDLIM5-216ENST00000511767 IFNA17P01571 189 aa12.19□□□□□ -0.46
PDLIM5-216ENST00000511767 CTSGP08311 255 aa12.19□□□□□ -0.46
PDLIM5-216ENST00000511767 ADMP35318 185 aa12.19□□□□□ -0.46
PDLIM5-216ENST00000511767 SUPT4H1P63272 117 aaKnown RBP12.19□□□□□ -0.46
PDLIM5-216ENST00000511767 SPINK9Q5DT21 86 aa12.19□□□□□ -0.46
PDLIM5-216ENST00000511767 FAM219AQ8IW50 185 aa12.19□□□□□ -0.46
PDLIM5-216ENST00000511767 TOMM5Q8N4H5 51 aa12.19□□□□□ -0.46
PDLIM5-216ENST00000511767 UXS1Q8NBZ7 420 aa12.19□□□□□ -0.46
PDLIM5-216ENST00000511767 RBPMSQ93062 196 aaKnown RBP12.19□□□□□ -0.46
PDLIM5-216ENST00000511767 PLEKHA3Q9HB20 300 aa12.19□□□□□ -0.46
PDLIM5-216ENST00000511767 C19orf73Q9NVV2 129 aa12.19□□□□□ -0.46
PDLIM5-216ENST00000511767 TECRQ9NZ01 308 aaKnown RBP12.19□□□□□ -0.46
PDLIM5-216ENST00000511767 NDUFA13Q9P0J0 144 aa12.19□□□□□ -0.46
PDLIM5-216ENST00000511767 OR2T8A6NH00 312 aa12.18□□□□□ -0.46
PDLIM5-216ENST00000511767 A8MWP6 167 aa12.18□□□□□ -0.46
PDLIM5-216ENST00000511767 A8MZ25 164 aa12.18□□□□□ -0.46
PDLIM5-216ENST00000511767 FCGR2BP31994 310 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms