RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 OR5B17Q8NGF7 314 aa1.67□□□□□ -2.14
GYPB-210ENST00000508841 MRPL30Q8TCC3 161 aaKnown RBP1.67□□□□□ -2.14
GYPB-210ENST00000508841 TMEM106AQ96A25 262 aa1.67□□□□□ -2.14
GYPB-210ENST00000508841 GLI3P10071 1580 aa1.67□□□□□ -2.14
GYPB-210ENST00000508841 KIF13BQ9NQT8 1826 aa1.66□□□□□ -2.14
GYPB-210ENST00000508841 AHSA1O95433 338 aa1.66□□□□□ -2.14
GYPB-210ENST00000508841 CD79AP11912 226 aa1.66□□□□□ -2.14
GYPB-210ENST00000508841 HIST1H2BOP23527 126 aa1.66□□□□□ -2.14
GYPB-210ENST00000508841 HIST1H2BBP33778 126 aa1.66□□□□□ -2.14
GYPB-210ENST00000508841 NKX2-5P52952 324 aaPredicted RBP1.66□□□□□ -2.14
GYPB-210ENST00000508841 HIST1H2BDP58876 126 aa1.66□□□□□ -2.14
GYPB-210ENST00000508841 PSME3P61289 254 aa1.66□□□□□ -2.14
GYPB-210ENST00000508841 HIST1H2BCP62807 126 aa1.66□□□□□ -2.14
GYPB-210ENST00000508841 OR2F1Q13607 317 aa1.66□□□□□ -2.14
GYPB-210ENST00000508841 HIST2H2BEQ16778 126 aa1.66□□□□□ -2.14
GYPB-210ENST00000508841 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.66□□□□□ -2.14
GYPB-210ENST00000508841 AAED1Q7RTV5 226 aa1.66□□□□□ -2.14
GYPB-210ENST00000508841 IQCF2Q8IXL9 164 aa1.66□□□□□ -2.14
GYPB-210ENST00000508841 C20orf196Q8IYI0 205 aa1.66□□□□□ -2.14
GYPB-210ENST00000508841 C12orf29Q8N999 325 aa1.66□□□□□ -2.14
GYPB-210ENST00000508841 HIST1H2BHQ93079 126 aa1.66□□□□□ -2.14
GYPB-210ENST00000508841 ARL5BQ96KC2 179 aa1.66□□□□□ -2.14
GYPB-210ENST00000508841 HIST1H2BNQ99877 126 aa1.66□□□□□ -2.14
GYPB-210ENST00000508841 HIST1H2BMQ99879 126 aa1.66□□□□□ -2.14
GYPB-210ENST00000508841 PRTFDC1Q9NRG1 225 aa1.66□□□□□ -2.14
GYPB-210ENST00000508841 CISHQ9NSE2 258 aa1.66□□□□□ -2.14
GYPB-210ENST00000508841 KIF24Q5T7B8 1368 aa1.65□□□□□ -2.15
GYPB-210ENST00000508841 PSMD12O00232 456 aaPredicted RBP1.65□□□□□ -2.15
GYPB-210ENST00000508841 TNNC2P02585 160 aa1.65□□□□□ -2.15
GYPB-210ENST00000508841 UBBP0CG47 229 aa1.65□□□□□ -2.15
GYPB-210ENST00000508841 SULT1A1P50225 295 aa1.65□□□□□ -2.15
GYPB-210ENST00000508841 SUPT4H1P63272 117 aaKnown RBP1.65□□□□□ -2.15
GYPB-210ENST00000508841 SPANXN3Q5MJ09 141 aa1.65□□□□□ -2.15
GYPB-210ENST00000508841 AADACL3Q5VUY0 350 aa1.65□□□□□ -2.15
GYPB-210ENST00000508841 Q8N2B8 174 aa1.65□□□□□ -2.15
GYPB-210ENST00000508841 OR51D1Q8NGF3 324 aa1.65□□□□□ -2.15
GYPB-210ENST00000508841 OR13C4Q8NGS5 318 aa1.65□□□□□ -2.15
GYPB-210ENST00000508841 SERPINI1Q99574 410 aa1.65□□□□□ -2.15
GYPB-210ENST00000508841 DERL1Q9BUN8 251 aa1.65□□□□□ -2.15
GYPB-210ENST00000508841 COMMD5Q9GZQ3 224 aa1.65□□□□□ -2.15
GYPB-210ENST00000508841 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.64□□□□□ -2.15
GYPB-210ENST00000508841 SPCS3P61009 180 aa1.64□□□□□ -2.15
GYPB-210ENST00000508841 PTRHD1Q6GMV3 140 aaKnown RBP1.64□□□□□ -2.15
GYPB-210ENST00000508841 ALKAL1Q6UXT8 129 aa1.64□□□□□ -2.15
GYPB-210ENST00000508841 DEFB128Q7Z7B8 93 aa1.64□□□□□ -2.15
GYPB-210ENST00000508841 LINC00471Q8N535 108 aa1.64□□□□□ -2.15
GYPB-210ENST00000508841 OR5AC2Q9NZP5 309 aa1.64□□□□□ -2.15
GYPB-210ENST00000508841 CKLFQ9UBR5 152 aa1.64□□□□□ -2.15
GYPB-210ENST00000508841 SNAPC4Q5SXM2 1469 aa1.63□□□□□ -2.15
GYPB-210ENST00000508841 TENM1Q9UKZ4 2725 aa1.63□□□□□ -2.15
GYPB-210ENST00000508841 KMT2BQ9UMN6 2715 aaPredicted RBP1.63□□□□□ -2.15
GYPB-210ENST00000508841 COL6A6A6NMZ7 2263 aa1.63□□□□□ -2.15
GYPB-210ENST00000508841 SHBGP04278 402 aa1.63□□□□□ -2.15
GYPB-210ENST00000508841 CDK10Q15131 360 aa1.63□□□□□ -2.15
GYPB-210ENST00000508841 C10orf55Q5SWW7 151 aa1.63□□□□□ -2.15
GYPB-210ENST00000508841 LPCAT3Q6P1A2 487 aa1.63□□□□□ -2.15
GYPB-210ENST00000508841 WFDC11Q8NEX6 87 aa1.63□□□□□ -2.15
GYPB-210ENST00000508841 SCGB3A1Q96QR1 104 aa1.63□□□□□ -2.15
GYPB-210ENST00000508841 NOSIPQ9Y314 301 aaKnown RBP1.63□□□□□ -2.15
GYPB-210ENST00000508841 SNURFQ9Y675 71 aa1.63□□□□□ -2.15
GYPB-210ENST00000508841 SETD5Q9C0A6 1442 aa1.63□□□□□ -2.15
GYPB-210ENST00000508841 MED12LQ86YW9 2145 aa1.63□□□□□ -2.15
GYPB-210ENST00000508841 HLA-DRB1P01911 266 aa1.62□□□□□ -2.15
GYPB-210ENST00000508841 HTR1AP08908 422 aa1.62□□□□□ -2.15
GYPB-210ENST00000508841 KRTAP10-4P60372 401 aaPredicted RBP1.62□□□□□ -2.15
GYPB-210ENST00000508841 PLCXD2Q0VAA5 305 aa1.62□□□□□ -2.15
GYPB-210ENST00000508841 TMEM86BQ8N661 226 aa1.62□□□□□ -2.15
GYPB-210ENST00000508841 ZNF439Q8NDP4 499 aa1.62□□□□□ -2.15
GYPB-210ENST00000508841 OR4D11Q8NGI4 311 aa1.62□□□□□ -2.15
GYPB-210ENST00000508841 STRCQ7RTU9 1775 aa1.62□□□□□ -2.15
GYPB-210ENST00000508841 ARFGEF3Q5TH69 2177 aa1.61□□□□□ -2.15
GYPB-210ENST00000508841 CCDC88AQ3V6T2 1871 aa1.61□□□□□ -2.15
GYPB-210ENST00000508841 IGKV2D-26A0A0A0MRZ7 120 aa1.61□□□□□ -2.15
GYPB-210ENST00000508841 OR5F1O95221 314 aa1.61□□□□□ -2.15
GYPB-210ENST00000508841 IFNA10P01566 189 aa1.61□□□□□ -2.15
GYPB-210ENST00000508841 HIST1H1TP22492 207 aaPredicted RBP1.61□□□□□ -2.15
GYPB-210ENST00000508841 HBA1P69905 142 aa1.61□□□□□ -2.15
GYPB-210ENST00000508841 RUNX1Q01196 453 aa1.61□□□□□ -2.15
GYPB-210ENST00000508841 SURF2Q15527 256 aaPredicted RBP1.61□□□□□ -2.15
GYPB-210ENST00000508841 IMPG1Q17R60 797 aa1.61□□□□□ -2.15
GYPB-210ENST00000508841 LCN15Q6UWW0 184 aa1.61□□□□□ -2.15
GYPB-210ENST00000508841 OR2T4Q8NH00 348 aa1.61□□□□□ -2.15
GYPB-210ENST00000508841 TRABDQ9H4I3 376 aa1.61□□□□□ -2.15
GYPB-210ENST00000508841 TTC21AQ8NDW8 1320 aa1.61□□□□□ -2.15
GYPB-210ENST00000508841 TRAV14DV4A0A0A6YYC5 116 aa1.6□□□□□ -2.15
GYPB-210ENST00000508841 A0A0D9SG52 128 aa1.6□□□□□ -2.15
GYPB-210ENST00000508841 NIPSNAP2O75323 286 aa1.6□□□□□ -2.15
GYPB-210ENST00000508841 CLPSP04118 112 aa1.6□□□□□ -2.15
GYPB-210ENST00000508841 IFNA16P05015 189 aa1.6□□□□□ -2.15
GYPB-210ENST00000508841 SNRPD2P62316 118 aaKnown RBP1.6□□□□□ -2.15
GYPB-210ENST00000508841 C8orf74Q6P047 294 aa1.6□□□□□ -2.15
GYPB-210ENST00000508841 NIPSNAP1Q9BPW8 284 aa1.6□□□□□ -2.15
GYPB-210ENST00000508841 FBXL12Q9NXK8 326 aa1.6□□□□□ -2.15
GYPB-210ENST00000508841 UBE2IP63279 158 aaKnown RBP1.59□□□□□ -2.15
GYPB-210ENST00000508841 ZNF846Q147U1 533 aa1.59□□□□□ -2.15
GYPB-210ENST00000508841 ACOT6Q3I5F7 207 aaPredicted RBP1.59□□□□□ -2.15
GYPB-210ENST00000508841 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.59□□□□□ -2.15
GYPB-210ENST00000508841 ZNF826PQ6ZT77 177 aa1.59□□□□□ -2.15
GYPB-210ENST00000508841 PFN4Q8NHR9 129 aa1.59□□□□□ -2.15
GYPB-210ENST00000508841 TOMM6Q96B49 74 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms