RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 OR4A16Q8NH70 328 aa8.95□□□□□ -0.98
UBA3-211ENST00000493957 PRKDCP78527 4128 aaKnown RBP8.94□□□□□ -0.98
UBA3-211ENST00000493957 SEC14L6B5MCN3 397 aa8.94□□□□□ -0.98
UBA3-211ENST00000493957 PPP5D1E7EU14 171 aa8.94□□□□□ -0.98
UBA3-211ENST00000493957 PLA2G10O15496 165 aa8.94□□□□□ -0.98
UBA3-211ENST00000493957 ST8SIA3O43173 380 aa8.94□□□□□ -0.98
UBA3-211ENST00000493957 KLK9Q2XQG4 91 aa8.94□□□□□ -0.98
UBA3-211ENST00000493957 SGPP2Q8IWX5 399 aa8.94□□□□□ -0.98
UBA3-211ENST00000493957 NECAP1Q8NC96 275 aa8.94□□□□□ -0.98
UBA3-211ENST00000493957 OR5B3Q8NH48 314 aa8.94□□□□□ -0.98
UBA3-211ENST00000493957 RBPMSQ93062 196 aaKnown RBP8.94□□□□□ -0.98
UBA3-211ENST00000493957 LSM10Q969L4 123 aaKnown RBP8.94□□□□□ -0.98
UBA3-211ENST00000493957 GPR146Q96CH1 333 aa8.94□□□□□ -0.98
UBA3-211ENST00000493957 GALNT14Q96FL9 552 aa8.94□□□□□ -0.98
UBA3-211ENST00000493957 USMG5Q96IX5 58 aa8.94□□□□□ -0.98
UBA3-211ENST00000493957 CCDC140Q96MF4 163 aa8.94□□□□□ -0.98
UBA3-211ENST00000493957 TSC22D3Q99576 134 aa8.94□□□□□ -0.98
UBA3-211ENST00000493957 PTTG2Q9NZH5 202 aa8.94□□□□□ -0.98
UBA3-211ENST00000493957 PEF1Q9UBV8 284 aaKnown RBP8.94□□□□□ -0.98
UBA3-211ENST00000493957 KLK9Q9UKQ9 250 aa8.94□□□□□ -0.98
UBA3-211ENST00000493957 FLVCR2Q9UPI3 526 aa8.94□□□□□ -0.98
UBA3-211ENST00000493957 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.93□□□□□ -0.98
UBA3-211ENST00000493957 IGHV3-21A0A0B4J1V1 117 aa8.93□□□□□ -0.98
UBA3-211ENST00000493957 BMPR1BO00238 502 aa8.93□□□□□ -0.98
UBA3-211ENST00000493957 OVOL1O14753 267 aa8.93□□□□□ -0.98
UBA3-211ENST00000493957 NXPH3O95157 252 aa8.93□□□□□ -0.98
UBA3-211ENST00000493957 HLA-AP01891 365 aaKnown RBP8.93□□□□□ -0.98
UBA3-211ENST00000493957 DEFA4P12838 97 aa8.93□□□□□ -0.98
UBA3-211ENST00000493957 MECP2P51608 486 aaKnown RBP8.93□□□□□ -0.98
UBA3-211ENST00000493957 PRCDQ00LT1 54 aa8.93□□□□□ -0.98
UBA3-211ENST00000493957 DHODHQ02127 395 aa8.93□□□□□ -0.98
UBA3-211ENST00000493957 ANKRD55Q3KP44 614 aa8.93□□□□□ -0.98
UBA3-211ENST00000493957 THOC7Q6I9Y2 204 aaKnown RBP8.93□□□□□ -0.98
UBA3-211ENST00000493957 HAPLN4Q86UW8 402 aa8.93□□□□□ -0.98
UBA3-211ENST00000493957 SLC35G3Q8N808 338 aa8.93□□□□□ -0.98
UBA3-211ENST00000493957 RNASE11Q8TAA1 199 aaKnown RBP8.93□□□□□ -0.98
UBA3-211ENST00000493957 TMEM56Q96MV1 263 aa8.93□□□□□ -0.98
UBA3-211ENST00000493957 SCGB3A2Q96PL1 93 aa8.93□□□□□ -0.98
UBA3-211ENST00000493957 SRSF8Q9BRL6 282 aaKnown RBP8.93□□□□□ -0.98
UBA3-211ENST00000493957 AURKAIP1Q9NWT8 199 aaPredicted RBP8.93□□□□□ -0.98
UBA3-211ENST00000493957 CACNG5Q9UF02 275 aa8.93□□□□□ -0.98
UBA3-211ENST00000493957 F11RQ9Y624 299 aaKnown RBP8.93□□□□□ -0.98
UBA3-211ENST00000493957 TMEM56-RWDD3S4R434 201 aa8.93□□□□□ -0.98
UBA3-211ENST00000493957 B3GALNT1O75752 331 aa8.92□□□□□ -0.98
UBA3-211ENST00000493957 NDUFB6O95139 128 aa8.92□□□□□ -0.98
UBA3-211ENST00000493957 DUS4LO95620 317 aaKnown RBP8.92□□□□□ -0.98
UBA3-211ENST00000493957 HSPE1P61604 102 aaKnown RBP8.92□□□□□ -0.98
UBA3-211ENST00000493957 PPP1R1AQ13522 171 aa8.92□□□□□ -0.98
UBA3-211ENST00000493957 RBMS2Q15434 407 aaKnown RBP8.92□□□□□ -0.98
UBA3-211ENST00000493957 CLEC19AQ6UXS0 136 aa8.92□□□□□ -0.98
UBA3-211ENST00000493957 LYZL2Q7Z4W2 148 aa8.92□□□□□ -0.98
UBA3-211ENST00000493957 ZNF429Q86V71 674 aa8.92□□□□□ -0.98
UBA3-211ENST00000493957 OR2C3Q8N628 320 aa8.92□□□□□ -0.98
UBA3-211ENST00000493957 DEDD2Q8WXF8 326 aa8.92□□□□□ -0.98
UBA3-211ENST00000493957 RRNAD1Q96FB5 475 aaKnown RBP8.92□□□□□ -0.98
UBA3-211ENST00000493957 SLC25A21Q9BQT8 299 aaPredicted RBP8.92□□□□□ -0.98
UBA3-211ENST00000493957 RANGRFQ9HD47 186 aaPredicted RBP8.92□□□□□ -0.98
UBA3-211ENST00000493957 ZC4H2Q9NQZ6 224 aa8.92□□□□□ -0.98
UBA3-211ENST00000493957 FKBP11Q9NYL4 201 aa8.92□□□□□ -0.98
UBA3-211ENST00000493957 WI2-2373I1.2A0A1W2PRP0 233 aa8.91□□□□□ -0.98
UBA3-211ENST00000493957 NAP1L6A6NFF2 107 aa8.91□□□□□ -0.98
UBA3-211ENST00000493957 ATG12O94817 140 aa8.91□□□□□ -0.98
UBA3-211ENST00000493957 DHFRP00374 187 aa8.91□□□□□ -0.98
UBA3-211ENST00000493957 HIST1H1BP16401 226 aaKnown RBP8.91□□□□□ -0.98
UBA3-211ENST00000493957 EDN2P20800 178 aa8.91□□□□□ -0.98
UBA3-211ENST00000493957 VAMP1P23763 118 aa8.91□□□□□ -0.98
UBA3-211ENST00000493957 SYNJ2BPP57105 145 aa8.91□□□□□ -0.98
UBA3-211ENST00000493957 EGFEM1PQ0D2K5 195 aa8.91□□□□□ -0.98
UBA3-211ENST00000493957 KLF5Q13887 457 aaPredicted RBP8.91□□□□□ -0.98
UBA3-211ENST00000493957 TMEM128Q5BJH2 165 aa8.91□□□□□ -0.98
UBA3-211ENST00000493957 NMSQ5H8A3 153 aa8.91□□□□□ -0.98
UBA3-211ENST00000493957 C9orf66Q5T8R8 295 aa8.91□□□□□ -0.98
UBA3-211ENST00000493957 SLC25A24Q6NUK1 477 aa8.91□□□□□ -0.98
UBA3-211ENST00000493957 CENPSQ8N2Z9 138 aa8.91□□□□□ -0.98
UBA3-211ENST00000493957 MCRIP2Q9BUT9 160 aaKnown RBP8.91□□□□□ -0.98
UBA3-211ENST00000493957 BATF3Q9NR55 127 aa8.91□□□□□ -0.98
UBA3-211ENST00000493957 F8W735 103 aaPredicted RBP8.9□□□□□ -0.98
UBA3-211ENST00000493957 K7EIM0 57 aa8.9□□□□□ -0.98
UBA3-211ENST00000493957 LYRM1O43325 122 aa8.9□□□□□ -0.98
UBA3-211ENST00000493957 SFT2D2O95562 160 aa8.9□□□□□ -0.98
UBA3-211ENST00000493957 IFNA17P01571 189 aa8.9□□□□□ -0.98
UBA3-211ENST00000493957 IGHV3-48P01763 117 aa8.9□□□□□ -0.98
UBA3-211ENST00000493957 ANXA7P20073 488 aaKnown RBP8.9□□□□□ -0.98
UBA3-211ENST00000493957 ZP3P21754 424 aa8.9□□□□□ -0.98
UBA3-211ENST00000493957 RPEL1Q2QD12 228 aa8.9□□□□□ -0.98
UBA3-211ENST00000493957 AARDQ4LEZ3 155 aa8.9□□□□□ -0.98
UBA3-211ENST00000493957 ACSM6Q6P461 480 aa8.9□□□□□ -0.98
UBA3-211ENST00000493957 IL34Q6ZMJ4 242 aa8.9□□□□□ -0.98
UBA3-211ENST00000493957 LINC00299Q6ZSB3 139 aa8.9□□□□□ -0.98
UBA3-211ENST00000493957 HSD17B13Q7Z5P4 300 aaPredicted RBP8.9□□□□□ -0.98
UBA3-211ENST00000493957 FAM219AQ8IW50 185 aa8.9□□□□□ -0.98
UBA3-211ENST00000493957 ZNF502Q8TBZ5 544 aa8.9□□□□□ -0.98
UBA3-211ENST00000493957 IL22RA2Q969J5 263 aa8.9□□□□□ -0.98
UBA3-211ENST00000493957 EEF1AKMT3Q96AZ1 226 aa8.9□□□□□ -0.98
UBA3-211ENST00000493957 MISP3Q96FF7 219 aa8.9□□□□□ -0.98
UBA3-211ENST00000493957 KRTAP4-7Q9BYR0 210 aa8.9□□□□□ -0.98
UBA3-211ENST00000493957 PLEKHA3Q9HB20 300 aa8.9□□□□□ -0.98
UBA3-211ENST00000493957 TBC1D24Q9ULP9 559 aa8.9□□□□□ -0.98
UBA3-211ENST00000493957 KCNIP3Q9Y2W7 256 aa8.9□□□□□ -0.98
UBA3-211ENST00000493957 TGP01266 2768 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms