RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 GUCA2BQ16661 112 aa5.38□□□□□ -1.55
PDCD4-209ENST00000489049 VMA21Q3ZAQ7 101 aa5.38□□□□□ -1.55
PDCD4-209ENST00000489049 C2orf83Q53S99 150 aa5.38□□□□□ -1.55
PDCD4-209ENST00000489049 SPSB3Q6PJ21 355 aa5.38□□□□□ -1.55
PDCD4-209ENST00000489049 SLC35E3Q7Z769 313 aa5.38□□□□□ -1.55
PDCD4-209ENST00000489049 TGIF2LYQ8IUE0 185 aa5.38□□□□□ -1.55
PDCD4-209ENST00000489049 TGIF2LXQ8IUE1 241 aa5.38□□□□□ -1.55
PDCD4-209ENST00000489049 ABHD12Q8N2K0 398 aa5.38□□□□□ -1.55
PDCD4-209ENST00000489049 PNKDQ8N490 385 aa5.38□□□□□ -1.55
PDCD4-209ENST00000489049 KIR3DL3Q8N743 410 aa5.38□□□□□ -1.55
PDCD4-209ENST00000489049 TEX45Q8NA69 505 aa5.38□□□□□ -1.55
PDCD4-209ENST00000489049 LY6G5BQ8NDX9 201 aa5.38□□□□□ -1.55
PDCD4-209ENST00000489049 SLC24A4Q8NFF2 622 aa5.38□□□□□ -1.55
PDCD4-209ENST00000489049 CLDND2Q8NHS1 167 aa5.38□□□□□ -1.55
PDCD4-209ENST00000489049 RNASEH2CQ8TDP1 164 aaKnown RBP5.38□□□□□ -1.55
PDCD4-209ENST00000489049 SSX3Q99909 188 aa5.38□□□□□ -1.55
PDCD4-209ENST00000489049 COMMD5Q9GZQ3 224 aa5.38□□□□□ -1.55
PDCD4-209ENST00000489049 CHODLQ9H9P2 273 aa5.38□□□□□ -1.55
PDCD4-209ENST00000489049 PLEKHA3Q9HB20 300 aa5.38□□□□□ -1.55
PDCD4-209ENST00000489049 RPRMQ9NS64 109 aa5.38□□□□□ -1.55
PDCD4-209ENST00000489049 ROS1P08922 2347 aa5.38□□□□□ -1.55
PDCD4-209ENST00000489049 ZFYVE26Q68DK2 2539 aa5.38□□□□□ -1.55
PDCD4-209ENST00000489049 TANC2Q9HCD6 1990 aa5.38□□□□□ -1.55
PDCD4-209ENST00000489049 UBE2L5PA0A1B0GUS4 154 aa5.37□□□□□ -1.55
PDCD4-209ENST00000489049 LOC102723971A0A1B0GUV8 181 aa5.37□□□□□ -1.55
PDCD4-209ENST00000489049 MAP1LC3B2A6NCE7 125 aa5.37□□□□□ -1.55
PDCD4-209ENST00000489049 CXorf65A6NEN9 183 aa5.37□□□□□ -1.55
PDCD4-209ENST00000489049 DNASE2O00115 360 aaPredicted RBP5.37□□□□□ -1.55
PDCD4-209ENST00000489049 AGPAT2O15120 278 aa5.37□□□□□ -1.55
PDCD4-209ENST00000489049 MT-CO2P00403 227 aa5.37□□□□□ -1.55
PDCD4-209ENST00000489049 BCL2P10415 239 aa5.37□□□□□ -1.55
PDCD4-209ENST00000489049 RPL29P47914 159 aaKnown RBP5.37□□□□□ -1.55
PDCD4-209ENST00000489049 RPL8P62917 257 aaKnown RBP5.37□□□□□ -1.55
PDCD4-209ENST00000489049 BSXQ3C1V8 233 aa5.37□□□□□ -1.55
PDCD4-209ENST00000489049 C19orf54Q5BKX5 351 aa5.37□□□□□ -1.55
PDCD4-209ENST00000489049 ETFRF1Q6IPR1 90 aa5.37□□□□□ -1.55
PDCD4-209ENST00000489049 C11orf71Q6IPW1 123 aa5.37□□□□□ -1.55
PDCD4-209ENST00000489049 C15orf54Q8N8G6 183 aa5.37□□□□□ -1.55
PDCD4-209ENST00000489049 OR10G9Q8NGN4 311 aa5.37□□□□□ -1.55
PDCD4-209ENST00000489049 OR10G7Q8NGN6 311 aa5.37□□□□□ -1.55
PDCD4-209ENST00000489049 SLC35E1Q96K37 410 aa5.37□□□□□ -1.55
PDCD4-209ENST00000489049 RNF2Q99496 336 aa5.37□□□□□ -1.55
PDCD4-209ENST00000489049 NABP2Q9BQ15 211 aa5.37□□□□□ -1.55
PDCD4-209ENST00000489049 NIPSNAP3BQ9BS92 247 aa5.37□□□□□ -1.55
PDCD4-209ENST00000489049 CLEC7AQ9BXN2 247 aa5.37□□□□□ -1.55
PDCD4-209ENST00000489049 NPCDR1Q9BY65 106 aa5.37□□□□□ -1.55
PDCD4-209ENST00000489049 MAP1LC3BQ9GZQ8 125 aa5.37□□□□□ -1.55
PDCD4-209ENST00000489049 MS4A7Q9GZW8 240 aaPredicted RBP5.37□□□□□ -1.55
PDCD4-209ENST00000489049 SIRT7Q9NRC8 400 aa5.37□□□□□ -1.55
PDCD4-209ENST00000489049 FAM96BQ9Y3D0 163 aa5.37□□□□□ -1.55
PDCD4-209ENST00000489049 ARL2-SNX15V9GYD0 113 aa5.37□□□□□ -1.55
PDCD4-209ENST00000489049 DMXL2Q8TDJ6 3036 aa5.37□□□□□ -1.55
PDCD4-209ENST00000489049 ARFGEF3Q5TH69 2177 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 PPIAL4CA0A0B4J2A2 164 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 A0A1W2PPV4 95 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 CORTO00230 105 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 C1QL1O75973 258 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 NXPH3O95157 252 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 IGLV1-47P01700 117 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 SRP19P09132 144 aaKnown RBP5.36□□□□□ -1.55
PDCD4-209ENST00000489049 PPIAL4GP0DN37 164 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 GYPEP15421 78 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 ADCYAP1P18509 176 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 FHITP49789 147 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 GNG10P50151 68 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 EFNA4P52798 201 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 HOXA4Q00056 320 aaPredicted RBP5.36□□□□□ -1.55
PDCD4-209ENST00000489049 RUNX1Q01196 453 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 PAX2Q02962 417 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 HLA-DRB5Q30154 266 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 RNF212Q495C1 297 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 GAGE13Q4V321 117 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 FFAR4Q5NUL3 377 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 WDR25Q64LD2 544 aaPredicted RBP5.36□□□□□ -1.55
PDCD4-209ENST00000489049 FAM53AQ6NSI3 398 aaPredicted RBP5.36□□□□□ -1.55
PDCD4-209ENST00000489049 CCDC144NLQ6NUI1 221 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 DUX4L9Q6RFH8 374 aaPredicted RBP5.36□□□□□ -1.55
PDCD4-209ENST00000489049 LYPD2Q6UXB3 125 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 ZNF841Q6ZN19 808 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 TMEM144Q7Z5S9 345 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 MMD2Q8IY49 270 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 ZCCHC24Q8N2G6 241 aaKnown RBP5.36□□□□□ -1.55
PDCD4-209ENST00000489049 OR11H6Q8NGC7 330 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 OR1L6Q8NGR2 347 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 NEUROG1Q92886 237 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 TVP23CQ96ET8 276 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 HARBI1Q96MB7 349 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 RSG1Q9BU20 258 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 MRPL20Q9BYC9 149 aaKnown RBP5.36□□□□□ -1.55
PDCD4-209ENST00000489049 PATZ1Q9HBE1 687 aaKnown RBP5.36□□□□□ -1.55
PDCD4-209ENST00000489049 NDUFA4L2Q9NRX3 87 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 TMEM242Q9NWH2 141 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 DCAF16Q9NXF7 216 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 CTSZQ9UBR2 303 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 LSM4Q9Y4Z0 139 aaKnown RBP5.36□□□□□ -1.55
PDCD4-209ENST00000489049 LOC400499M0QZD8 3231 aa5.36□□□□□ -1.55
PDCD4-209ENST00000489049 HELZ2Q9BYK8 2649 aaKnown RBP5.35□□□□□ -1.55
PDCD4-209ENST00000489049 PKDREJQ9NTG1 2253 aa5.35□□□□□ -1.55
PDCD4-209ENST00000489049 IGHV2-26A0A0B4J1V2 119 aa5.35□□□□□ -1.55
PDCD4-209ENST00000489049 TEX50A0A1B0GTY4 177 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms