RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 INS-IGF2F8WCM5 200 aa6.45□□□□□ -1.38
SF3A1-208ENST00000485618 ST8SIA3O43173 380 aa6.45□□□□□ -1.38
SF3A1-208ENST00000485618 IL5P05113 134 aa6.45□□□□□ -1.38
SF3A1-208ENST00000485618 OR8U8P0C7N1 319 aa6.45□□□□□ -1.38
SF3A1-208ENST00000485618 P0C879 139 aa6.45□□□□□ -1.38
SF3A1-208ENST00000485618 APELAP0DMC3 54 aa6.45□□□□□ -1.38
SF3A1-208ENST00000485618 CTRB1P17538 263 aa6.45□□□□□ -1.38
SF3A1-208ENST00000485618 HTR2BP41595 481 aa6.45□□□□□ -1.38
SF3A1-208ENST00000485618 KRTAP10-3P60369 221 aa6.45□□□□□ -1.38
SF3A1-208ENST00000485618 RHOGP84095 191 aa6.45□□□□□ -1.38
SF3A1-208ENST00000485618 RUNX1Q01196 453 aa6.45□□□□□ -1.38
SF3A1-208ENST00000485618 SRSF4Q08170 494 aaKnown RBP6.45□□□□□ -1.38
SF3A1-208ENST00000485618 TCTEX1D4Q5JR98 221 aa6.45□□□□□ -1.38
SF3A1-208ENST00000485618 C10orf55Q5SWW7 151 aa6.45□□□□□ -1.38
SF3A1-208ENST00000485618 CTRB2Q6GPI1 263 aa6.45□□□□□ -1.38
SF3A1-208ENST00000485618 SLC25A24Q6NUK1 477 aa6.45□□□□□ -1.38
SF3A1-208ENST00000485618 LCNL1Q6ZST4 164 aa6.45□□□□□ -1.38
SF3A1-208ENST00000485618 LYZL2Q7Z4W2 148 aa6.45□□□□□ -1.38
SF3A1-208ENST00000485618 NRARPQ7Z6K4 114 aa6.45□□□□□ -1.38
SF3A1-208ENST00000485618 ZNF491Q8N8L2 437 aa6.45□□□□□ -1.38
SF3A1-208ENST00000485618 UXS1Q8NBZ7 420 aa6.45□□□□□ -1.38
SF3A1-208ENST00000485618 OR1N2Q8NGR9 330 aa6.45□□□□□ -1.38
SF3A1-208ENST00000485618 OR1P1Q8NH06 330 aa6.45□□□□□ -1.38
SF3A1-208ENST00000485618 EEF1AKMT3Q96AZ1 226 aa6.45□□□□□ -1.38
SF3A1-208ENST00000485618 GPR146Q96CH1 333 aa6.45□□□□□ -1.38
SF3A1-208ENST00000485618 MCRIP2Q9BUT9 160 aaKnown RBP6.45□□□□□ -1.38
SF3A1-208ENST00000485618 RANGRFQ9HD47 186 aaPredicted RBP6.45□□□□□ -1.38
SF3A1-208ENST00000485618 HEYLQ9NQ87 328 aaPredicted RBP6.45□□□□□ -1.38
SF3A1-208ENST00000485618 ZMAT5Q9UDW3 170 aaKnown RBP6.45□□□□□ -1.38
SF3A1-208ENST00000485618 FBXL7Q9UJT9 491 aa6.45□□□□□ -1.38
SF3A1-208ENST00000485618 FBXO7Q9Y3I1 522 aa6.45□□□□□ -1.38
SF3A1-208ENST00000485618 KMT2CQ8NEZ4 4911 aaKnown RBP6.44□□□□□ -1.38
SF3A1-208ENST00000485618 RPS10-NUDT3A0A1W2PQS6 291 aa6.44□□□□□ -1.38
SF3A1-208ENST00000485618 IGLC7A0M8Q6 106 aa6.44□□□□□ -1.38
SF3A1-208ENST00000485618 SNRPGP15A8MWD9 76 aa6.44□□□□□ -1.38
SF3A1-208ENST00000485618 CCL24O00175 119 aa6.44□□□□□ -1.38
SF3A1-208ENST00000485618 WRBO00258 174 aa6.44□□□□□ -1.38
SF3A1-208ENST00000485618 HSPB1P04792 205 aaKnown RBP6.44□□□□□ -1.38
SF3A1-208ENST00000485618 HOXB5P09067 269 aa6.44□□□□□ -1.38
SF3A1-208ENST00000485618 LGALS1P09382 135 aaKnown RBP6.44□□□□□ -1.38
SF3A1-208ENST00000485618 AREGP15514 252 aa6.44□□□□□ -1.38
SF3A1-208ENST00000485618 SSBP2P81877 361 aaPredicted RBP6.44□□□□□ -1.38
SF3A1-208ENST00000485618 EXOSC2Q13868 293 aaKnown RBP6.44□□□□□ -1.38
SF3A1-208ENST00000485618 RGS21Q2M5E4 152 aa6.44□□□□□ -1.38
SF3A1-208ENST00000485618 C15orf32Q32M92 178 aa6.44□□□□□ -1.38
SF3A1-208ENST00000485618 ANKRD55Q3KP44 614 aa6.44□□□□□ -1.38
SF3A1-208ENST00000485618 AARDQ4LEZ3 155 aa6.44□□□□□ -1.38
SF3A1-208ENST00000485618 NMSQ5H8A3 153 aa6.44□□□□□ -1.38
SF3A1-208ENST00000485618 ETFRF1Q6IPR1 90 aa6.44□□□□□ -1.38
SF3A1-208ENST00000485618 C12orf45Q8N5I9 185 aaPredicted RBP6.44□□□□□ -1.38
SF3A1-208ENST00000485618 OR2C3Q8N628 320 aa6.44□□□□□ -1.38
SF3A1-208ENST00000485618 LHFPL5Q8TAF8 219 aa6.44□□□□□ -1.38
SF3A1-208ENST00000485618 MYOZ3Q8TDC0 251 aa6.44□□□□□ -1.38
SF3A1-208ENST00000485618 VN1R17PQ8TDU5 208 aa6.44□□□□□ -1.38
SF3A1-208ENST00000485618 ATP6V0BQ99437 205 aa6.44□□□□□ -1.38
SF3A1-208ENST00000485618 MARVELD1Q9BSK0 173 aa6.44□□□□□ -1.38
SF3A1-208ENST00000485618 KLK15Q9H2R5 256 aa6.44□□□□□ -1.38
SF3A1-208ENST00000485618 F11RQ9Y624 299 aaKnown RBP6.44□□□□□ -1.38
SF3A1-208ENST00000485618 U3KQ87 197 aa6.44□□□□□ -1.38
SF3A1-208ENST00000485618 WNK1Q9H4A3 2382 aa6.43□□□□□ -1.38
SF3A1-208ENST00000485618 TRBV9A0A0B4J1U6 114 aa6.43□□□□□ -1.38
SF3A1-208ENST00000485618 C5orf51A6NDU8 294 aa6.43□□□□□ -1.38
SF3A1-208ENST00000485618 SOX15O60248 233 aa6.43□□□□□ -1.38
SF3A1-208ENST00000485618 OR2J3O76001 311 aa6.43□□□□□ -1.38
SF3A1-208ENST00000485618 IFNA10P01566 189 aa6.43□□□□□ -1.38
SF3A1-208ENST00000485618 REG1AP05451 166 aa6.43□□□□□ -1.38
SF3A1-208ENST00000485618 CD33P20138 364 aa6.43□□□□□ -1.38
SF3A1-208ENST00000485618 RAB11AP62491 216 aa6.43□□□□□ -1.38
SF3A1-208ENST00000485618 CYCSP99999 105 aaKnown RBP6.43□□□□□ -1.38
SF3A1-208ENST00000485618 IFITM3Q01628 133 aa6.43□□□□□ -1.38
SF3A1-208ENST00000485618 WT1-ASQ06250 92 aa6.43□□□□□ -1.38
SF3A1-208ENST00000485618 TNFRSF9Q07011 255 aa6.43□□□□□ -1.38
SF3A1-208ENST00000485618 ZNF616Q08AN1 781 aa6.43□□□□□ -1.38
SF3A1-208ENST00000485618 KLK9Q2XQG4 91 aa6.43□□□□□ -1.38
SF3A1-208ENST00000485618 ASPHD1Q5U4P2 390 aa6.43□□□□□ -1.38
SF3A1-208ENST00000485618 GGNBP1Q5YKI7 109 aa6.43□□□□□ -1.38
SF3A1-208ENST00000485618 C10orf99Q6UWK7 81 aa6.43□□□□□ -1.38
SF3A1-208ENST00000485618 GSG1LQ6UXU4 331 aa6.43□□□□□ -1.38
SF3A1-208ENST00000485618 ZNF114Q8NC26 417 aa6.43□□□□□ -1.38
SF3A1-208ENST00000485618 OR10W1Q8NGF6 305 aa6.43□□□□□ -1.38
SF3A1-208ENST00000485618 PEF1Q9UBV8 284 aaKnown RBP6.43□□□□□ -1.38
SF3A1-208ENST00000485618 HSPB7Q9UBY9 170 aa6.43□□□□□ -1.38
SF3A1-208ENST00000485618 KLK9Q9UKQ9 250 aa6.43□□□□□ -1.38
SF3A1-208ENST00000485618 VWFP04275 2813 aa6.43□□□□□ -1.38
SF3A1-208ENST00000485618 IGLV11-55A0A075B6I3 123 aa6.42□□□□□ -1.38
SF3A1-208ENST00000485618 DBX1A6NMT0 343 aa6.42□□□□□ -1.38
SF3A1-208ENST00000485618 FAM25EA8MYX2 175 aa6.42□□□□□ -1.38
SF3A1-208ENST00000485618 E7EUB6 86 aa6.42□□□□□ -1.38
SF3A1-208ENST00000485618 LINC01619G3V211 115 aa6.42□□□□□ -1.38
SF3A1-208ENST00000485618 SSNA1O43805 119 aa6.42□□□□□ -1.38
SF3A1-208ENST00000485618 SCAF4O95104 1147 aaKnown RBP6.42□□□□□ -1.38
SF3A1-208ENST00000485618 IGHV3-11P01762 117 aa6.42□□□□□ -1.38
SF3A1-208ENST00000485618 MYOD1P15172 320 aa6.42□□□□□ -1.38
SF3A1-208ENST00000485618 PVALBP20472 110 aaPredicted RBP6.42□□□□□ -1.38
SF3A1-208ENST00000485618 NKX2-1P43699 371 aaPredicted RBP6.42□□□□□ -1.38
SF3A1-208ENST00000485618 NPBWR1P48145 328 aa6.42□□□□□ -1.38
SF3A1-208ENST00000485618 MFAP4P55083 255 aa6.42□□□□□ -1.38
SF3A1-208ENST00000485618 KIAA0141Q14154 515 aaPredicted RBP6.42□□□□□ -1.38
SF3A1-208ENST00000485618 IZUMO4Q1ZYL8 232 aa6.42□□□□□ -1.38
SF3A1-208ENST00000485618 IAH1Q2TAA2 248 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms