RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 POLR1DQ9Y2S0 133 aa2.42□□□□□ -2.02
CDC42BPA-212ENST00000478573 RHBDD3Q9Y3P4 386 aa2.42□□□□□ -2.02
CDC42BPA-212ENST00000478573 CHTOPQ9Y3Y2 248 aaKnown RBP2.42□□□□□ -2.02
CDC42BPA-212ENST00000478573 LHFPL6Q9Y693 200 aa2.42□□□□□ -2.02
CDC42BPA-212ENST00000478573 TMEM14AQ9Y6G1 99 aa2.42□□□□□ -2.02
CDC42BPA-212ENST00000478573 TET2Q6N021 2002 aaPredicted RBP2.42□□□□□ -2.02
CDC42BPA-212ENST00000478573 JMJD1CQ15652 2540 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 KIAA2026Q5HYC2 2103 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 IGHV3OR16-9A0A0B4J2B5 98 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 IGHV1-69-2A0A0G2JMI3 117 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 A0A0J9YXV3 536 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 C5orf49A4QMS7 147 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 RIIAD1A6NNX1 92 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 ZNF705GA8MUZ8 300 aaPredicted RBP2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 B4DSR2 109 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 H7C1H1 209 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 M0R135 149 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 GABRPO00591 440 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 BPY2O14599 106 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 GNGT2O14610 69 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 SOCS1O15524 211 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 SLC16A7O60669 478 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 CCNKO75909 580 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 LY6HO94772 140 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 IFNGP01579 166 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 IGHV1-46P01743 117 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 APOC1P02654 83 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 CDK1P06493 297 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 MSMBP08118 114 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 ADRA2AP08913 450 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 PGA5P0DJD9 388 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 HIST1H1CP16403 213 aaKnown RBP2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 PRKACAP17612 351 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 SRMP19623 302 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 DTYMKP23919 212 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 POLR2IP36954 125 aaKnown RBP2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 MPV17P39210 176 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 CD200P41217 278 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 AP2S1P53680 142 aaPredicted RBP2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 ERVS71-1P61550 626 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 GRB2P62993 217 aaKnown RBP2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 SLAQ13239 276 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 MAD2L1BPQ15013 274 aaPredicted RBP2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 TEX30Q5JUR7 227 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 LAIR2Q6ISS4 152 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 TBPL2Q6SJ96 375 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 DRAM2Q6UX65 266 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 C12orf54Q6X4T0 127 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 IDO2Q6ZQW0 420 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 WDR86Q86TI4 376 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 LRP11Q86VZ4 500 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 SPICQ8N5J4 248 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 BPIFB6Q8NFQ5 453 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 OR10W1Q8NGF6 305 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 OR8D4Q8NGM9 314 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 TEX47Q8TBZ9 253 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 DEDD2Q8WXF8 326 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 AP3S1Q92572 193 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 RAB1CQ92928 201 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 SPTSSAQ969W0 71 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 PTX4Q96A99 478 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 Q96MT0 163 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 OR2J1Q9GZK6 312 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 SLC22A4Q9H015 551 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 DCSTAMPQ9H295 470 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 ZNF430Q9H8G1 570 aaPredicted RBP2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 EDA2RQ9HAV5 297 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 ABCB9Q9NP78 766 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 ZC4H2Q9NQZ6 224 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 ZNF355PQ9NSJ1 428 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 CYB5R1Q9UHQ9 305 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 GLS2Q9UI32 602 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 ZNF391Q9UJN7 358 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 SAMHD1Q9Y3Z3 626 aaKnown RBP2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 IER3IP1Q9Y5U9 82 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 V9GYQ6 96 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 CUBNO60494 3623 aa2.41□□□□□ -2.02
CDC42BPA-212ENST00000478573 ATRQ13535 2644 aa2.4□□□□□ -2.02
CDC42BPA-212ENST00000478573 TMEM223A0PJW6 202 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 LINC00862A6NCI5 91 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 J3QRK9 145 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 PHYHO14832 338 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 ZNF207O43670 478 aaKnown RBP2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 TCF21O43680 179 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 ZNF324O75467 553 aaPredicted RBP2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 FOXH1O75593 365 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 C1QBP02746 253 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 CCL2P13500 99 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 CD36P16671 472 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 SPI1P17947 270 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 RAB5AP20339 215 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 CCNOP22674 350 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 GGT2P36268 569 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 TGFBR2P37173 567 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 SRP9P49458 86 aaKnown RBP2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 CDC42P60953 191 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 SNRPGP62308 76 aaKnown RBP2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 TNFAIP6P98066 277 aaPredicted RBP2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 IFITM2Q01629 132 aa2.4□□□□□ -2.03
CDC42BPA-212ENST00000478573 PTGES3Q15185 160 aaKnown RBP2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms