RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 UBE2D3P61077 147 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 UBE2D2P62837 147 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 SUMO1P63165 101 aaKnown RBP3.31□□□□□ -1.88
USP16-205ENST00000474835 TLE1Q04724 770 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 C17orf67Q0P5P2 114 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 POM121L1PQ3SYA9 428 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 Q6Q795 121 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 DHRS13Q6UX07 377 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 SPEM1Q8N4L4 309 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 NECAP1Q8NC96 275 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 CACNG5Q9UF02 275 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 LINC00473A8K010 186 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 AQP7O14520 342 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 SPRY1O43609 319 aaPredicted RBP3.3□□□□□ -1.88
USP16-205ENST00000474835 FOXH1O75593 365 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 BCL3P20749 454 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 KIR2DL2P43627 348 aaPredicted RBP3.3□□□□□ -1.88
USP16-205ENST00000474835 CDC34P49427 236 aaPredicted RBP3.3□□□□□ -1.88
USP16-205ENST00000474835 LOXL3P58215 753 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 RPL31P62899 125 aaKnown RBP3.3□□□□□ -1.88
USP16-205ENST00000474835 PRAMEF20Q5VT98 475 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 MRPL21Q7Z2W9 205 aaKnown RBP3.3□□□□□ -1.88
USP16-205ENST00000474835 ZNF329Q86UD4 541 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 ZNF502Q8TBZ5 544 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 RND1Q92730 232 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 ZNF488Q96MN9 340 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 C19orf24Q9BVV8 132 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 PLA2G2FQ9BZM2 168 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 ZNF586Q9NXT0 402 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 IL36RNQ9UBH0 155 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 MYO7AQ13402 2215 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 KIR2DS1A0A191URI9 304 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 ANKRD30BLA7E2S9 258 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 ZNF823P16415 610 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 AZU1P20160 251 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 COX5AP20674 150 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 GPR183P32249 361 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 KIR2DS4P43632 304 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 HINT1P49773 126 aaPredicted RBP3.3□□□□□ -1.88
USP16-205ENST00000474835 HTD2P86397 168 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 KIR2DS1Q14954 304 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 WIPI1Q5MNZ9 446 aaPredicted RBP3.3□□□□□ -1.88
USP16-205ENST00000474835 MORN3Q6PF18 240 aaPredicted RBP3.3□□□□□ -1.88
USP16-205ENST00000474835 PSRC1Q6PGN9 363 aaPredicted RBP3.3□□□□□ -1.88
USP16-205ENST00000474835 SHISA6Q6ZSJ9 500 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 MED12LQ86YW9 2145 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 POM121L12Q8N7R1 296 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 OR1F12Q8NHA8 337 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 SLC37A2Q8TED4 501 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 NKD1Q969G9 470 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 TMEM70Q9BUB7 260 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 OR2H1Q9GZK4 316 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 RNF186Q9NXI6 227 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 LY6G6EA0A0G2JKS1 128 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 RNF223E7ERA6 249 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 MEOX1P50221 254 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 MLF1P58340 268 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 DEFB103AP81534 67 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 DMRTC1Q5HYR2 192 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 CFAP126Q5VTH2 177 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 STUMQ69YW2 141 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 METTL27Q8N6F8 245 aaPredicted RBP3.3□□□□□ -1.88
USP16-205ENST00000474835 FXYD5Q96DB9 178 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 C17orf77Q96MU5 243 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 METTL7AQ9H8H3 244 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 SLC25A22Q9H936 323 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 DLL3Q9NYJ7 618 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 SH3BGRL2Q9UJC5 107 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 U3KQA8 63 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 MED12Q93074 2177 aa3.3□□□□□ -1.88
USP16-205ENST00000474835 LOC102724200A0A096LPH7 203 aaPredicted RBP3.29□□□□□ -1.88
USP16-205ENST00000474835 A0A0G2JMM0 328 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 SPTY2D1-AS1A0A0U1RR47 76 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 A0A1W2PPB8 328 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 KIR3DP1A8MWS1 328 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 M0R135 149 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 SNAI2O43623 268 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 DEFA4P12838 97 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 GABRG2P18507 467 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 CEBPGP53567 150 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 IZUMO4Q1ZYL8 232 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 SPATA31B1PQ5VZV4 182 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 CPEB2Q7Z5Q1 589 aaKnown RBP3.29□□□□□ -1.88
USP16-205ENST00000474835 ANKRD37Q7Z713 158 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 CD177Q8N6Q3 437 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 OR9G4Q8NGQ1 327 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 ZNF799Q96GE5 643 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 CARD19Q96LW7 228 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 GPHA2Q96T91 129 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 SRXN1Q9BYN0 137 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 TPSG1Q9NRR2 321 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 RPH3ALQ9UNE2 315 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 ZNF816-ZNF321PA0A0X1KG74 233 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 F8W1H4 67 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 EIF4EBP3O60516 100 aaPredicted RBP3.29□□□□□ -1.88
USP16-205ENST00000474835 SCGB1D2O95969 90 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 CELA2AP08217 269 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 CT45A6P0DMU7 189 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 CT45A5P0DMU8 189 aa3.29□□□□□ -1.88
USP16-205ENST00000474835 CT45A7P0DMV0 189 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms