RNA–Protein interactions for RNA: ENST00000466159.6

SYNE1-217, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYNE1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-217ENST00000466159 H0YJW9 148 aa7.28□□□□□ -1.24
SYNE1-217ENST00000466159 HNF1AP20823 631 aa7.28□□□□□ -1.24
SYNE1-217ENST00000466159 CHRNB4P30926 498 aa7.28□□□□□ -1.24
SYNE1-217ENST00000466159 RHOBP62745 196 aa7.28□□□□□ -1.24
SYNE1-217ENST00000466159 FOXC1Q12948 553 aa7.28□□□□□ -1.24
SYNE1-217ENST00000466159 MIR17HGQ75NE6 70 aa7.28□□□□□ -1.24
SYNE1-217ENST00000466159 OR2T10Q8NGZ9 312 aa7.28□□□□□ -1.24
SYNE1-217ENST00000466159 RNASE6Q93091 150 aaKnown RBP7.28□□□□□ -1.24
SYNE1-217ENST00000466159 HARBI1Q96MB7 349 aa7.28□□□□□ -1.24
SYNE1-217ENST00000466159 BET1LQ9NYM9 111 aa7.28□□□□□ -1.24
SYNE1-217ENST00000466159 CEP295Q9C0D2 2601 aa7.28□□□□□ -1.24
SYNE1-217ENST00000466159 PLXNB1O43157 2135 aa7.27□□□□□ -1.24
SYNE1-217ENST00000466159 E7EUB6 86 aa7.27□□□□□ -1.25
SYNE1-217ENST00000466159 GGCTO75223 188 aaKnown RBP7.27□□□□□ -1.25
SYNE1-217ENST00000466159 TBR1Q16650 682 aa7.27□□□□□ -1.25
SYNE1-217ENST00000466159 FAM78BQ5VT40 261 aa7.27□□□□□ -1.25
SYNE1-217ENST00000466159 ASCL5Q7RTU5 278 aa7.27□□□□□ -1.25
SYNE1-217ENST00000466159 CTSZQ9UBR2 303 aa7.27□□□□□ -1.25
SYNE1-217ENST00000466159 SLC45A2Q9UMX9 530 aa7.27□□□□□ -1.25
SYNE1-217ENST00000466159 SHISA9B4DS77 424 aa7.27□□□□□ -1.25
SYNE1-217ENST00000466159 E7EQL1 145 aa7.27□□□□□ -1.25
SYNE1-217ENST00000466159 DVL1O14640 695 aa7.27□□□□□ -1.25
SYNE1-217ENST00000466159 TNFRSF13BO14836 293 aaPredicted RBP7.27□□□□□ -1.25
SYNE1-217ENST00000466159 NDUFB3O43676 98 aa7.27□□□□□ -1.25
SYNE1-217ENST00000466159 APOA2P02652 100 aa7.27□□□□□ -1.25
SYNE1-217ENST00000466159 RD3LP0DJH9 198 aa7.27□□□□□ -1.25
SYNE1-217ENST00000466159 RNASE2P10153 161 aaKnown RBP7.27□□□□□ -1.25
SYNE1-217ENST00000466159 SRP14P37108 136 aaKnown RBP7.27□□□□□ -1.25
SYNE1-217ENST00000466159 GAMTQ14353 236 aa7.27□□□□□ -1.25
SYNE1-217ENST00000466159 PRSS8Q16651 343 aa7.27□□□□□ -1.25
SYNE1-217ENST00000466159 TMEM144Q7Z5S9 345 aa7.27□□□□□ -1.25
SYNE1-217ENST00000466159 OR5AN1Q8NGI8 311 aa7.27□□□□□ -1.25
SYNE1-217ENST00000466159 OSR1Q8TAX0 266 aaPredicted RBP7.27□□□□□ -1.25
SYNE1-217ENST00000466159 PITPNC1Q9UKF7 332 aa7.27□□□□□ -1.25
SYNE1-217ENST00000466159 SSUH2Q9Y2M2 353 aa7.27□□□□□ -1.25
SYNE1-217ENST00000466159 TLN1Q9Y490 2541 aaKnown RBP7.26□□□□□ -1.25
SYNE1-217ENST00000466159 OR10J1P30954 320 aa7.26□□□□□ -1.25
SYNE1-217ENST00000466159 C2orf83Q53S99 150 aa7.26□□□□□ -1.25
SYNE1-217ENST00000466159 LRRC10Q5BKY1 277 aa7.26□□□□□ -1.25
SYNE1-217ENST00000466159 DMRTC2Q8IXT2 367 aaPredicted RBP7.26□□□□□ -1.25
SYNE1-217ENST00000466159 OR10X1Q8NGY0 326 aa7.26□□□□□ -1.25
SYNE1-217ENST00000466159 OR5B3Q8NH48 314 aa7.26□□□□□ -1.25
SYNE1-217ENST00000466159 OR9G1Q8NH87 305 aa7.26□□□□□ -1.25
SYNE1-217ENST00000466159 OCC1Q8TAD7 63 aa7.26□□□□□ -1.25
SYNE1-217ENST00000466159 TMEM37Q8WXS4 190 aa7.26□□□□□ -1.25
SYNE1-217ENST00000466159 FLYWCH2Q96CP2 140 aaKnown RBP7.26□□□□□ -1.25
SYNE1-217ENST00000466159 NABP2Q9BQ15 211 aa7.26□□□□□ -1.25
SYNE1-217ENST00000466159 TXNDC17Q9BRA2 123 aa7.26□□□□□ -1.25
SYNE1-217ENST00000466159 DYNLRB1Q9NP97 96 aa7.26□□□□□ -1.25
SYNE1-217ENST00000466159 FKBP11Q9NYL4 201 aa7.26□□□□□ -1.25
SYNE1-217ENST00000466159 FUT9Q9Y231 359 aa7.26□□□□□ -1.25
SYNE1-217ENST00000466159 NAV3Q8IVL0 2385 aa7.26□□□□□ -1.25
SYNE1-217ENST00000466159 FNDC10F2Z333 226 aa7.26□□□□□ -1.25
SYNE1-217ENST00000466159 SSTP61278 116 aa7.26□□□□□ -1.25
SYNE1-217ENST00000466159 RPL8P62917 257 aaKnown RBP7.26□□□□□ -1.25
SYNE1-217ENST00000466159 KCNIP4Q6PIL6 250 aa7.26□□□□□ -1.25
SYNE1-217ENST00000466159 SFRP2Q96HF1 295 aa7.26□□□□□ -1.25
SYNE1-217ENST00000466159 HIST1H2BLQ99880 126 aa7.26□□□□□ -1.25
SYNE1-217ENST00000466159 COMMD5Q9GZQ3 224 aa7.26□□□□□ -1.25
SYNE1-217ENST00000466159 NDUFA4L2Q9NRX3 87 aa7.26□□□□□ -1.25
SYNE1-217ENST00000466159 DMRT1Q9Y5R6 373 aa7.26□□□□□ -1.25
SYNE1-217ENST00000466159 PTPRQQ9UMZ3 2332 aa7.26□□□□□ -1.25
SYNE1-217ENST00000466159 FAM87AP0C7U9 286 aa7.25□□□□□ -1.25
SYNE1-217ENST00000466159 CD99P14209 185 aa7.25□□□□□ -1.25
SYNE1-217ENST00000466159 IL3RAP26951 378 aa7.25□□□□□ -1.25
SYNE1-217ENST00000466159 LOXP28300 417 aaPredicted RBP7.25□□□□□ -1.25
SYNE1-217ENST00000466159 PSG5Q15238 335 aa7.25□□□□□ -1.25
SYNE1-217ENST00000466159 TMEM177Q53S58 311 aa7.25□□□□□ -1.25
SYNE1-217ENST00000466159 C10orf55Q5SWW7 151 aa7.25□□□□□ -1.25
SYNE1-217ENST00000466159 OR2T6Q8NHC8 308 aa7.25□□□□□ -1.25
SYNE1-217ENST00000466159 SCNM1Q9BWG6 230 aa7.25□□□□□ -1.25
SYNE1-217ENST00000466159 XKRY2A2RUG3 117 aa7.25□□□□□ -1.25
SYNE1-217ENST00000466159 VSTM5A8MXK1 200 aa7.25□□□□□ -1.25
SYNE1-217ENST00000466159 TYMSP04818 313 aa7.25□□□□□ -1.25
SYNE1-217ENST00000466159 DLX1P56177 255 aa7.25□□□□□ -1.25
SYNE1-217ENST00000466159 CD69Q07108 199 aa7.25□□□□□ -1.25
SYNE1-217ENST00000466159 ACTL10Q5JWF8 245 aa7.25□□□□□ -1.25
SYNE1-217ENST00000466159 TMEM183AQ8IXX5 376 aa7.25□□□□□ -1.25
SYNE1-217ENST00000466159 OR4C13Q8NGP0 309 aa7.25□□□□□ -1.25
SYNE1-217ENST00000466159 OR1L8Q8NGR8 309 aa7.25□□□□□ -1.25
SYNE1-217ENST00000466159 OR1P1Q8NH06 330 aa7.25□□□□□ -1.25
SYNE1-217ENST00000466159 SGMS2Q8NHU3 365 aa7.25□□□□□ -1.25
SYNE1-217ENST00000466159 ZNF503Q96F45 646 aa7.25□□□□□ -1.25
SYNE1-217ENST00000466159 RITA1Q96K30 269 aa7.25□□□□□ -1.25
SYNE1-217ENST00000466159 PACRGQ96M98 296 aaPredicted RBP7.25□□□□□ -1.25
SYNE1-217ENST00000466159 A0A0U1RQK1 487 aa7.24□□□□□ -1.25
SYNE1-217ENST00000466159 MDFIC2A0A1B0GVS7 189 aa7.24□□□□□ -1.25
SYNE1-217ENST00000466159 ZNF320A2RRD8 509 aa7.24□□□□□ -1.25
SYNE1-217ENST00000466159 CGB1A6NKQ9 187 aa7.24□□□□□ -1.25
SYNE1-217ENST00000466159 K7EN84 100 aa7.24□□□□□ -1.25
SYNE1-217ENST00000466159 MT-CO2P00403 227 aa7.24□□□□□ -1.25
SYNE1-217ENST00000466159 PLAUP00749 431 aa7.24□□□□□ -1.25
SYNE1-217ENST00000466159 DLX6P56179 175 aa7.24□□□□□ -1.25
SYNE1-217ENST00000466159 ST6GALNAC6Q969X2 333 aa7.24□□□□□ -1.25
SYNE1-217ENST00000466159 ACY3Q96HD9 319 aa7.24□□□□□ -1.25
SYNE1-217ENST00000466159 LRBAP50851 2863 aa7.24□□□□□ -1.25
SYNE1-217ENST00000466159 K7ENP7 123 aa7.24□□□□□ -1.25
SYNE1-217ENST00000466159 IGLV2-23P01705 113 aa7.24□□□□□ -1.25
SYNE1-217ENST00000466159 IGHV3-48P01763 117 aa7.24□□□□□ -1.25
SYNE1-217ENST00000466159 USF1P22415 310 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms