RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 TRAV39A0A0B4J263 110 aa3.87□□□□□ -1.79
EDEM3-203ENST00000439962 MARCH11A6NNE9 402 aa3.87□□□□□ -1.79
EDEM3-203ENST00000439962 VWC2LB2RUY7 222 aa3.87□□□□□ -1.79
EDEM3-203ENST00000439962 NDUFS8O00217 210 aa3.87□□□□□ -1.79
EDEM3-203ENST00000439962 DVL1O14640 695 aa3.87□□□□□ -1.79
EDEM3-203ENST00000439962 ST8SIA5O15466 376 aa3.87□□□□□ -1.79
EDEM3-203ENST00000439962 EIF3GO75821 320 aaKnown RBP eCLIP3.87□□□□□ -1.79
EDEM3-203ENST00000439962 RUNX1Q01196 453 aa3.87□□□□□ -1.79
EDEM3-203ENST00000439962 ARL16Q0P5N6 197 aa3.87□□□□□ -1.79
EDEM3-203ENST00000439962 KLRD1Q13241 179 aa3.87□□□□□ -1.79
EDEM3-203ENST00000439962 HAGHQ16775 308 aa3.87□□□□□ -1.79
EDEM3-203ENST00000439962 TMEM241Q24JQ0 296 aa3.87□□□□□ -1.79
EDEM3-203ENST00000439962 COA6Q5JTJ3 125 aaKnown RBP3.87□□□□□ -1.79
EDEM3-203ENST00000439962 SPANXN5Q5MJ07 72 aa3.87□□□□□ -1.79
EDEM3-203ENST00000439962 OR4A5Q8NH83 315 aa3.87□□□□□ -1.79
EDEM3-203ENST00000439962 LHX4Q969G2 390 aa3.87□□□□□ -1.79
EDEM3-203ENST00000439962 R3HDM4Q96D70 268 aa3.87□□□□□ -1.79
EDEM3-203ENST00000439962 NPCDR1Q9BY65 106 aa3.87□□□□□ -1.79
EDEM3-203ENST00000439962 OR51M1Q9H341 326 aa3.87□□□□□ -1.79
EDEM3-203ENST00000439962 SRD5A3Q9H8P0 318 aa3.87□□□□□ -1.79
EDEM3-203ENST00000439962 RNF7Q9UBF6 113 aa3.87□□□□□ -1.79
EDEM3-203ENST00000439962 CTSZQ9UBR2 303 aa3.87□□□□□ -1.79
EDEM3-203ENST00000439962 C22orf46C9J442 243 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 S1PR2O95136 353 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 MT-CO2P00403 227 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 HRASP01112 189 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 IL6RP08887 468 aaPredicted RBP3.86□□□□□ -1.79
EDEM3-203ENST00000439962 FOSL1P15407 271 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 HNF1AP20823 631 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 CD1BP29016 333 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 VDAC2P45880 294 aaPredicted RBP3.86□□□□□ -1.79
EDEM3-203ENST00000439962 LOXL3P58215 753 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 RPL30P62888 115 aaKnown RBP3.86□□□□□ -1.79
EDEM3-203ENST00000439962 FAM24BQ8N5W8 94 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 CD177Q8N6Q3 437 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 OR10G9Q8NGN4 311 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 OR10G7Q8NGN6 311 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 ZNF596Q8TC21 504 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 ACY3Q96HD9 319 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 RNF2Q99496 336 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 GFOD1Q9NXC2 390 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 GNG13Q9P2W3 67 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 SLC25A10Q9UBX3 287 aaPredicted RBP3.86□□□□□ -1.79
EDEM3-203ENST00000439962 CDC42EP3Q9UKI2 254 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 PRNDQ9UKY0 176 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 TGP01266 2768 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 UBE2L5PA0A1B0GUS4 154 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 A0A1W2PPE2 198 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 C15orf61A6NNL5 157 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 C15orf62A8K5M9 175 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 ZNF727A8MUV8 499 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 C17orf98A8MV24 154 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 PRSS46E5RG02 174 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 IGHV2-70P01814 119 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 IAPPP10997 89 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 AREGP15514 252 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 FGF7P21781 194 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 COX7A1P24310 79 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 FAM3BP58499 235 aaPredicted RBP3.86□□□□□ -1.79
EDEM3-203ENST00000439962 BRWD1-AS2P59051 145 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 SNRPEP62304 92 aaKnown RBP3.86□□□□□ -1.79
EDEM3-203ENST00000439962 AESQ08117 197 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 RAB31Q13636 194 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 NCR3LG1Q68D85 454 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 STUMQ69YW2 141 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 RPP25LQ8N5L8 163 aaKnown RBP3.86□□□□□ -1.79
EDEM3-203ENST00000439962 C11orf44Q8N8P7 122 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 OR8B3Q8NGG8 313 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 OR52L2PQ8NGH6 319 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 OR13A1Q8NGR1 328 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 C5orf30Q96GV9 206 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 SLC35E1Q96K37 410 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 OR8B2Q96RD0 313 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 S1PR3Q99500 378 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 RSG1Q9BU20 258 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 ABHD14AQ9BUJ0 271 aa3.86□□□□□ -1.79
EDEM3-203ENST00000439962 PARP12Q9H0J9 701 aaKnown RBP3.86□□□□□ -1.79
EDEM3-203ENST00000439962 IGKV1D-17A0A075B6S4 117 aa3.85□□□□□ -1.79
EDEM3-203ENST00000439962 TRGV10A0A0A0MS01 117 aa3.85□□□□□ -1.79
EDEM3-203ENST00000439962 KBTBD11-OT1A0A1B0GTJ5 212 aa3.85□□□□□ -1.79
EDEM3-203ENST00000439962 CEBPZOSA8MTT3 80 aa3.85□□□□□ -1.79
EDEM3-203ENST00000439962 CXorf1O96002 111 aa3.85□□□□□ -1.79
EDEM3-203ENST00000439962 FBP1P09467 338 aa3.85□□□□□ -1.79
EDEM3-203ENST00000439962 G6PCP35575 357 aa3.85□□□□□ -1.79
EDEM3-203ENST00000439962 RPL29P47914 159 aaKnown RBP3.85□□□□□ -1.79
EDEM3-203ENST00000439962 CDC34P49427 236 aaPredicted RBP3.85□□□□□ -1.79
EDEM3-203ENST00000439962 AKR1D1P51857 326 aa3.85□□□□□ -1.79
EDEM3-203ENST00000439962 RELBQ01201 579 aa3.85□□□□□ -1.79
EDEM3-203ENST00000439962 FABP9Q0Z7S8 132 aa3.85□□□□□ -1.79
EDEM3-203ENST00000439962 KIAA0141Q14154 515 aaPredicted RBP3.85□□□□□ -1.79
EDEM3-203ENST00000439962 COX19Q49B96 90 aa3.85□□□□□ -1.79
EDEM3-203ENST00000439962 FFAR4Q5NUL3 377 aa3.85□□□□□ -1.79
EDEM3-203ENST00000439962 KCNIP4Q6PIL6 250 aa3.85□□□□□ -1.79
EDEM3-203ENST00000439962 PRR18Q8N4B5 295 aa3.85□□□□□ -1.79
EDEM3-203ENST00000439962 LINC00311Q8N616 119 aa3.85□□□□□ -1.79
EDEM3-203ENST00000439962 ZNF439Q8NDP4 499 aa3.85□□□□□ -1.79
EDEM3-203ENST00000439962 OR4A16Q8NH70 328 aa3.85□□□□□ -1.79
EDEM3-203ENST00000439962 RNASEH2CQ8TDP1 164 aaKnown RBP3.85□□□□□ -1.79
EDEM3-203ENST00000439962 MRGPRDQ8TDS7 321 aa3.85□□□□□ -1.79
EDEM3-203ENST00000439962 Q8WTZ3 238 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 219.1 ms