RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 KRTCAP3Q53RY4 240 aa12.16□□□□□ -0.46
DDX56-205ENST00000433257 CENPWQ5EE01 88 aa12.16□□□□□ -0.46
DDX56-205ENST00000433257 PLA2G3Q9NZ20 509 aa12.16□□□□□ -0.46
DDX56-205ENST00000433257 CLCF1Q9UBD9 225 aa12.16□□□□□ -0.46
DDX56-205ENST00000433257 ZFP30Q9Y2G7 519 aa12.16□□□□□ -0.46
DDX56-205ENST00000433257 ZNF407Q9C0G0 2248 aa12.15□□□□□ -0.46
DDX56-205ENST00000433257 DEFA4P12838 97 aa12.15□□□□□ -0.46
DDX56-205ENST00000433257 IRF2P14316 349 aa12.15□□□□□ -0.46
DDX56-205ENST00000433257 LINC00310P59036 64 aa12.15□□□□□ -0.46
DDX56-205ENST00000433257 ARG2P78540 354 aa12.15□□□□□ -0.46
DDX56-205ENST00000433257 C3AR1Q16581 482 aa12.15□□□□□ -0.46
DDX56-205ENST00000433257 ARSJQ5FYB0 599 aaPredicted RBP12.15□□□□□ -0.46
DDX56-205ENST00000433257 ZNF826PQ6ZT77 177 aa12.15□□□□□ -0.46
DDX56-205ENST00000433257 OR8I2Q8N0Y5 310 aa12.15□□□□□ -0.46
DDX56-205ENST00000433257 OR5B3Q8NH48 314 aa12.15□□□□□ -0.46
DDX56-205ENST00000433257 SSMEM1Q8WWF3 244 aa12.15□□□□□ -0.46
DDX56-205ENST00000433257 BORCS7Q96B45 105 aa12.15□□□□□ -0.46
DDX56-205ENST00000433257 WFIKKN1Q96NZ8 548 aa12.15□□□□□ -0.46
DDX56-205ENST00000433257 IFI27L2Q9H2X8 130 aa12.15□□□□□ -0.46
DDX56-205ENST00000433257 LPAR2Q9HBW0 351 aa12.15□□□□□ -0.46
DDX56-205ENST00000433257 PAM16Q9Y3D7 125 aa12.15□□□□□ -0.46
DDX56-205ENST00000433257 MED13Q9UHV7 2174 aa12.14□□□□□ -0.47
DDX56-205ENST00000433257 SMIM27A0A1W2PRY6 76 aa12.14□□□□□ -0.47
DDX56-205ENST00000433257 IZUMO1RA6ND01 250 aa12.14□□□□□ -0.47
DDX56-205ENST00000433257 C3orf80F5H4A9 247 aa12.14□□□□□ -0.47
DDX56-205ENST00000433257 PPOXP50336 477 aa12.14□□□□□ -0.47
DDX56-205ENST00000433257 CASP6P55212 293 aa12.14□□□□□ -0.47
DDX56-205ENST00000433257 LY6DQ14210 128 aa12.14□□□□□ -0.47
DDX56-205ENST00000433257 Q6ZR03 302 aa12.14□□□□□ -0.47
DDX56-205ENST00000433257 TMEM136Q6ZRR5 245 aa12.14□□□□□ -0.47
DDX56-205ENST00000433257 FAM231DQ6ZW35 169 aa12.14□□□□□ -0.47
DDX56-205ENST00000433257 ABHD12Q8N2K0 398 aa12.14□□□□□ -0.47
DDX56-205ENST00000433257 CD177Q8N6Q3 437 aa12.14□□□□□ -0.47
DDX56-205ENST00000433257 RFESDQ8TAC1 157 aa12.14□□□□□ -0.47
DDX56-205ENST00000433257 GNB4Q9HAV0 340 aa12.14□□□□□ -0.47
DDX56-205ENST00000433257 SEPSECSQ9HD40 501 aaKnown RBP12.14□□□□□ -0.47
DDX56-205ENST00000433257 ZNF331Q9NQX6 463 aaPredicted RBP12.14□□□□□ -0.47
DDX56-205ENST00000433257 ZNF71Q9NQZ8 489 aaPredicted RBP12.14□□□□□ -0.47
DDX56-205ENST00000433257 SPRR3Q9UBC9 169 aa12.14□□□□□ -0.47
DDX56-205ENST00000433257 YLPM1P49750 1951 aaKnown RBP12.14□□□□□ -0.47
DDX56-205ENST00000433257 DEFB108AA8MXU0 73 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 SLC17A3O00476 420 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 ZNF324O75467 553 aaPredicted RBP12.13□□□□□ -0.47
DDX56-205ENST00000433257 AMTP48728 403 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 PRRX1P54821 245 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 LOXL3P58215 753 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 PRCDQ00LT1 54 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 PSG5Q15238 335 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 C2orf83Q53S99 150 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 ZADH2Q8N4Q0 377 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 TMEM190Q8WZ59 177 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 SMIM12Q96EX1 92 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 NABP2Q9BQ15 211 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 DEFB127Q9H1M4 99 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 NRN1Q9NPD7 142 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 SLC35D1Q9NTN3 355 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 TBL2Q9Y4P3 447 aaKnown RBP12.13□□□□□ -0.47
DDX56-205ENST00000433257 ITPR1Q14643 2758 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 NBEAQ8NFP9 2946 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 GTF3C1Q12789 2109 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 ATMQ13315 3056 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 PROP1O75360 226 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 CA2P00918 260 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 IGLV1-44P01699 117 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 IGHG3P01860 377 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 BMP5P22003 454 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 CTRLP40313 264 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 KRTDAPP60985 99 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 EDDM3AQ14507 147 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 GUSBP1Q15486 140 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 IBA57Q5T440 356 aaKnown RBP12.13□□□□□ -0.47
DDX56-205ENST00000433257 OR4A47Q6IF82 309 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 OR1L8Q8NGR8 309 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 Q8TCH9 128 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 CACNG8Q8WXS5 425 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 STARD4Q96DR4 205 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 CALYQ9NYX4 217 aa12.13□□□□□ -0.47
DDX56-205ENST00000433257 A0A1B0GUS0 222 aa12.12□□□□□ -0.47
DDX56-205ENST00000433257 LYZL6O75951 148 aa12.12□□□□□ -0.47
DDX56-205ENST00000433257 CGAP01215 116 aa12.12□□□□□ -0.47
DDX56-205ENST00000433257 LINC00869P0C866 280 aa12.12□□□□□ -0.47
DDX56-205ENST00000433257 C8orf88P0DMB2 117 aa12.12□□□□□ -0.47
DDX56-205ENST00000433257 COMPP49747 757 aaPredicted RBP12.12□□□□□ -0.47
DDX56-205ENST00000433257 SPATA45Q537H7 98 aa12.12□□□□□ -0.47
DDX56-205ENST00000433257 CXorf67Q86X51 503 aaPredicted RBP12.12□□□□□ -0.47
DDX56-205ENST00000433257 OR2V2Q96R30 315 aa12.12□□□□□ -0.47
DDX56-205ENST00000433257 CDC42EP3Q9UKI2 254 aa12.12□□□□□ -0.47
DDX56-205ENST00000433257 OR51B2Q9Y5P1 312 aa12.12□□□□□ -0.47
DDX56-205ENST00000433257 APCSP02743 223 aa12.11□□□□□ -0.47
DDX56-205ENST00000433257 HNF1AP20823 631 aa12.11□□□□□ -0.47
DDX56-205ENST00000433257 HNRNPA3P51991 378 aaKnown RBP12.11□□□□□ -0.47
DDX56-205ENST00000433257 C3orf36Q3SXR2 165 aa12.11□□□□□ -0.47
DDX56-205ENST00000433257 DMRTA1Q5VZB9 504 aa12.11□□□□□ -0.47
DDX56-205ENST00000433257 IGFL3Q6UXB1 125 aa12.11□□□□□ -0.47
DDX56-205ENST00000433257 ST6GALNAC3Q8NDV1 305 aa12.11□□□□□ -0.47
DDX56-205ENST00000433257 OR1L4Q8NGR5 311 aa12.11□□□□□ -0.47
DDX56-205ENST00000433257 C1orf159Q96HA4 380 aa12.11□□□□□ -0.47
DDX56-205ENST00000433257 MSL2Q9HCI7 577 aa12.11□□□□□ -0.47
DDX56-205ENST00000433257 DUSP13Q9UII6 198 aa12.11□□□□□ -0.47
DDX56-205ENST00000433257 FBXL7Q9UJT9 491 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms