RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 MIR17HGQ75NE6 70 aa8.02□□□□□ -1.13
MSH2-202ENST00000406134 RBMXL3Q8N7X1 1067 aaKnown RBP8.02□□□□□ -1.13
MSH2-202ENST00000406134 NPVFQ9HCQ7 196 aa8.02□□□□□ -1.13
MSH2-202ENST00000406134 SLC45A2Q9UMX9 530 aa8.02□□□□□ -1.13
MSH2-202ENST00000406134 FSTL3O95633 263 aa8.02□□□□□ -1.13
MSH2-202ENST00000406134 ZNF25P17030 456 aaPredicted RBP8.02□□□□□ -1.13
MSH2-202ENST00000406134 RUSC1-AS1Q66K80 236 aa8.02□□□□□ -1.13
MSH2-202ENST00000406134 VHLLQ6RSH7 139 aa8.02□□□□□ -1.13
MSH2-202ENST00000406134 ICE1Q9Y2F5 2266 aa8.01□□□□□ -1.13
MSH2-202ENST00000406134 ZFHX2Q9C0A1 2572 aaPredicted RBP8.01□□□□□ -1.13
MSH2-202ENST00000406134 IGLV2-8P01709 118 aa8.01□□□□□ -1.13
MSH2-202ENST00000406134 NPY1RP25929 384 aa8.01□□□□□ -1.13
MSH2-202ENST00000406134 CEACAM8P31997 349 aaPredicted RBP8.01□□□□□ -1.13
MSH2-202ENST00000406134 HSPE1P61604 102 aaKnown RBP8.01□□□□□ -1.13
MSH2-202ENST00000406134 SSBP2P81877 361 aaPredicted RBP8.01□□□□□ -1.13
MSH2-202ENST00000406134 OR5B12Q96R08 314 aa8.01□□□□□ -1.13
MSH2-202ENST00000406134 THBS3P49746 956 aa8.01□□□□□ -1.13
MSH2-202ENST00000406134 RPL31P62899 125 aaKnown RBP8.01□□□□□ -1.13
MSH2-202ENST00000406134 PRCDQ00LT1 54 aa8.01□□□□□ -1.13
MSH2-202ENST00000406134 FAM27E3Q08E93 113 aa8.01□□□□□ -1.13
MSH2-202ENST00000406134 Q6ZS92 163 aa8.01□□□□□ -1.13
MSH2-202ENST00000406134 ZNF833PQ6ZTB9 187 aa8.01□□□□□ -1.13
MSH2-202ENST00000406134 CCL13Q99616 98 aa8.01□□□□□ -1.13
MSH2-202ENST00000406134 ASH1LQ9NR48 2969 aaKnown RBP8.01□□□□□ -1.13
MSH2-202ENST00000406134 V9GYV3 84 aa8.01□□□□□ -1.13
MSH2-202ENST00000406134 TEX50A0A1B0GTY4 177 aa8.01□□□□□ -1.13
MSH2-202ENST00000406134 F2Z2F3 143 aa8.01□□□□□ -1.13
MSH2-202ENST00000406134 FNDC10F2Z333 226 aa8.01□□□□□ -1.13
MSH2-202ENST00000406134 TNFRSF13BO14836 293 aaPredicted RBP8.01□□□□□ -1.13
MSH2-202ENST00000406134 AREGP15514 252 aa8.01□□□□□ -1.13
MSH2-202ENST00000406134 RAB4AP20338 218 aa8.01□□□□□ -1.13
MSH2-202ENST00000406134 HNF1AP20823 631 aa8.01□□□□□ -1.13
MSH2-202ENST00000406134 CNN1P51911 297 aaKnown RBP8.01□□□□□ -1.13
MSH2-202ENST00000406134 SELENOTP62341 195 aa8.01□□□□□ -1.13
MSH2-202ENST00000406134 MZT1Q08AG7 82 aa8.01□□□□□ -1.13
MSH2-202ENST00000406134 TEPPQ6URK8 271 aa8.01□□□□□ -1.13
MSH2-202ENST00000406134 CLEC2AQ6UVW9 174 aa8.01□□□□□ -1.13
MSH2-202ENST00000406134 IL19Q9UHD0 177 aa8.01□□□□□ -1.13
MSH2-202ENST00000406134 RNF114Q9Y508 228 aa8.01□□□□□ -1.13
MSH2-202ENST00000406134 OR51B2Q9Y5P1 312 aa8.01□□□□□ -1.13
MSH2-202ENST00000406134 SLC17A3O00476 420 aa8□□□□□ -1.13
MSH2-202ENST00000406134 UPK2O00526 184 aa8□□□□□ -1.13
MSH2-202ENST00000406134 GATA2P23769 480 aaPredicted RBP8□□□□□ -1.13
MSH2-202ENST00000406134 RAB7AP51149 207 aa8□□□□□ -1.13
MSH2-202ENST00000406134 SGMS2Q8NHU3 365 aa8□□□□□ -1.13
MSH2-202ENST00000406134 RPUSD1Q9UJJ7 312 aaKnown RBP8□□□□□ -1.13
MSH2-202ENST00000406134 TRGV10A0A0A0MS01 117 aa8□□□□□ -1.13
MSH2-202ENST00000406134 A0A1W2PPV4 95 aa8□□□□□ -1.13
MSH2-202ENST00000406134 GGTLC3B5MD39 225 aa8□□□□□ -1.13
MSH2-202ENST00000406134 SNRPCP09234 159 aaKnown RBP8□□□□□ -1.13
MSH2-202ENST00000406134 DIAPH2-AS1Q14236 149 aa8□□□□□ -1.13
MSH2-202ENST00000406134 LYG1Q8N1E2 194 aa8□□□□□ -1.13
MSH2-202ENST00000406134 OR10W1Q8NGF6 305 aa8□□□□□ -1.13
MSH2-202ENST00000406134 SVIPQ8NHG7 77 aa8□□□□□ -1.13
MSH2-202ENST00000406134 C9JCJ5 164 aa7.99□□□□□ -1.13
MSH2-202ENST00000406134 RNASE2P10153 161 aaKnown RBP7.99□□□□□ -1.13
MSH2-202ENST00000406134 LGALS4P56470 323 aa7.99□□□□□ -1.13
MSH2-202ENST00000406134 ERVK-16P61578 105 aa7.99□□□□□ -1.13
MSH2-202ENST00000406134 MRPS11P82912 194 aaKnown RBP7.99□□□□□ -1.13
MSH2-202ENST00000406134 IGF2BP2-AS1Q96M15 143 aa7.99□□□□□ -1.13
MSH2-202ENST00000406134 CHODLQ9H9P2 273 aa7.99□□□□□ -1.13
MSH2-202ENST00000406134 ZNF257Q9Y2Q1 563 aa7.99□□□□□ -1.13
MSH2-202ENST00000406134 SAA1P0DJI8 122 aaPredicted RBP7.99□□□□□ -1.13
MSH2-202ENST00000406134 C1orf185Q5T7R7 199 aa7.99□□□□□ -1.13
MSH2-202ENST00000406134 EAF1Q96JC9 268 aaPredicted RBP7.99□□□□□ -1.13
MSH2-202ENST00000406134 FAM167A-AS1Q96KT0 104 aa7.99□□□□□ -1.13
MSH2-202ENST00000406134 TXNDC17Q9BRA2 123 aa7.99□□□□□ -1.13
MSH2-202ENST00000406134 RNF7Q9UBF6 113 aa7.99□□□□□ -1.13
MSH2-202ENST00000406134 A8MXE2 369 aa7.99□□□□□ -1.13
MSH2-202ENST00000406134 COMPP49747 757 aaPredicted RBP7.99□□□□□ -1.13
MSH2-202ENST00000406134 OR5I1Q13606 314 aa7.99□□□□□ -1.13
MSH2-202ENST00000406134 KRTCAP3Q53RY4 240 aa7.99□□□□□ -1.13
MSH2-202ENST00000406134 ASPHD1Q5U4P2 390 aa7.99□□□□□ -1.13
MSH2-202ENST00000406134 ZCCHC24Q8N2G6 241 aaKnown RBP7.99□□□□□ -1.13
MSH2-202ENST00000406134 C2orf88Q9BSF0 95 aa7.99□□□□□ -1.13
MSH2-202ENST00000406134 GOLT1BQ9Y3E0 138 aa7.99□□□□□ -1.13
MSH2-202ENST00000406134 PLXNB1O43157 2135 aa7.99□□□□□ -1.13
MSH2-202ENST00000406134 A0A0U1RQK1 487 aa7.98□□□□□ -1.13
MSH2-202ENST00000406134 ZNF320A2RRD8 509 aa7.98□□□□□ -1.13
MSH2-202ENST00000406134 THBDP07204 575 aa7.98□□□□□ -1.13
MSH2-202ENST00000406134 ESDP10768 282 aa7.98□□□□□ -1.13
MSH2-202ENST00000406134 CD40P25942 277 aa7.98□□□□□ -1.13
MSH2-202ENST00000406134 NUTF2P61970 127 aaKnown RBP7.98□□□□□ -1.13
MSH2-202ENST00000406134 C16orf54Q6UWD8 224 aa7.98□□□□□ -1.13
MSH2-202ENST00000406134 POLR3KQ9Y2Y1 108 aaPredicted RBP7.98□□□□□ -1.13
MSH2-202ENST00000406134 GCGP01275 180 aa7.98□□□□□ -1.13
MSH2-202ENST00000406134 IGLV2-23P01705 113 aa7.98□□□□□ -1.13
MSH2-202ENST00000406134 OR5G3P0C626 314 aa7.98□□□□□ -1.13
MSH2-202ENST00000406134 TNFAIP6P98066 277 aaPredicted RBP7.98□□□□□ -1.13
MSH2-202ENST00000406134 OR4P4Q8NGL7 312 aa7.98□□□□□ -1.13
MSH2-202ENST00000406134 OR9G1Q8NH87 305 aa7.98□□□□□ -1.13
MSH2-202ENST00000406134 SLC25A2Q9BXI2 301 aa7.98□□□□□ -1.13
MSH2-202ENST00000406134 NDUFA4L2Q9NRX3 87 aa7.98□□□□□ -1.13
MSH2-202ENST00000406134 MRPL36Q9P0J6 103 aaKnown RBP7.98□□□□□ -1.13
MSH2-202ENST00000406134 TRAPPC1Q9Y5R8 145 aa7.98□□□□□ -1.13
MSH2-202ENST00000406134 LY96Q9Y6Y9 160 aa7.98□□□□□ -1.13
MSH2-202ENST00000406134 IGKV1D-37A0A075B6S9 117 aa7.98□□□□□ -1.13
MSH2-202ENST00000406134 GRIFINA4D1Z8 144 aa7.98□□□□□ -1.13
MSH2-202ENST00000406134 CBLN1P23435 193 aa7.98□□□□□ -1.13
MSH2-202ENST00000406134 C2orf83Q53S99 150 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms