RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 OR2K2Q8NGT1 345 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 FOXB1Q99853 325 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 PXMP4Q9Y6I8 212 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 FAM181BA6NEQ2 426 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 TMEM229AB2RXF0 380 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 RBP4P02753 201 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 CKS1BP61024 79 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 C10orf113Q5VZT2 155 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 ZNF562Q6V9R5 426 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 ZNF519Q8TB69 540 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 GGTLC1Q9BX51 225 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 AICDAQ9GZX7 198 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 GZMBP10144 247 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 FCGR2BP31994 310 aaPredicted RBP4.18□□□□□ -1.74
PTPRD-203ENST00000381196 FGF12P61328 243 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 LRRC29Q8WV35 223 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 SNRNP40Q96DI7 357 aaKnown RBP4.18□□□□□ -1.74
PTPRD-203ENST00000381196 IFI27L2Q9H2X8 130 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 MS4A5Q9H3V2 200 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 ZNF492Q9P255 531 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 PGPEP1LA6NFU8 196 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 PRR19A6NJB7 356 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 LIPT2A6NK58 231 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 H7C1H1 209 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 LDLRAD4O15165 306 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 PF4V1P10720 104 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 OR3A4PP47883 348 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 PAX2Q02962 417 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 SLC35E4Q6ICL7 350 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 OR4X1Q8NH49 305 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 SCARF2Q96GP6 870 aaPredicted RBP4.18□□□□□ -1.74
PTPRD-203ENST00000381196 HIGD1BQ9P298 99 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 KLHDC2Q9Y2U9 406 aa4.18□□□□□ -1.74
PTPRD-203ENST00000381196 SLC25A16P16260 332 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 MC5RP33032 325 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 THSD4Q6ZMP0 1018 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 ABHD3Q8WU67 409 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 NCOA6Q14686 2063 aaPredicted RBP4.17□□□□□ -1.74
PTPRD-203ENST00000381196 OR4C46A6NHA9 309 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 F2Z2F3 143 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 TM4SF5O14894 197 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 HOXA3O43365 443 aaPredicted RBP4.17□□□□□ -1.74
PTPRD-203ENST00000381196 CD300EQ496F6 205 aaPredicted RBP4.17□□□□□ -1.74
PTPRD-203ENST00000381196 TMEM101Q96IK0 257 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 TIMP4Q99727 224 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 PYGO2Q9BRQ0 406 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 NPCDR1Q9BY65 106 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 MED29Q9NX70 200 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 PRR14LQ5THK1 2151 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 TOMM40O96008 361 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 PF4P02776 101 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 LGALS7P47929 136 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 CHAC1Q9BUX1 264 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 MRPS18CQ9Y3D5 142 aaKnown RBP4.17□□□□□ -1.74
PTPRD-203ENST00000381196 C1QL3Q5VWW1 255 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 JMJD8Q96S16 334 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 HCFC1P51610 2035 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 FITM1A5D6W6 292 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 IGHG4P01861 327 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 LTBRP36941 435 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 KIRREL2Q6UWL6 708 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 ZNF418Q8TF45 676 aaPredicted RBP4.17□□□□□ -1.74
PTPRD-203ENST00000381196 CTHRC1Q96CG8 243 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 IGHV5-51A0A0C4DH38 117 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 OR1K1Q8NGR3 316 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 OR1L8Q8NGR8 309 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 OR4C3Q8NH37 302 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 OR10D3Q8NH80 312 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 SIGLEC12Q96PQ1 595 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 CISD3P0C7P0 127 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 TDGF1P13385 188 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 MFAP4P55083 255 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 KLF5Q13887 457 aaPredicted RBP4.17□□□□□ -1.74
PTPRD-203ENST00000381196 GAGE13Q4V321 117 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 SPINK14Q6IE38 97 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 OR10W1Q8NGF6 305 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 TSKUQ8WUA8 353 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 RASL11BQ9BPW5 248 aa4.17□□□□□ -1.74
PTPRD-203ENST00000381196 RTBDNQ9BSG5 229 aaPredicted RBP4.17□□□□□ -1.74
PTPRD-203ENST00000381196 A0A1W2PP11 408 aa4.16□□□□□ -1.74
PTPRD-203ENST00000381196 SSTR5P35346 364 aa4.16□□□□□ -1.74
PTPRD-203ENST00000381196 TIMP3P35625 211 aa4.16□□□□□ -1.74
PTPRD-203ENST00000381196 IER3P46695 156 aa4.16□□□□□ -1.74
PTPRD-203ENST00000381196 RRN3P1Q2M238 152 aa4.16□□□□□ -1.74
PTPRD-203ENST00000381196 OR10J6PQ8NGY7 276 aa4.16□□□□□ -1.74
PTPRD-203ENST00000381196 TRAV14DV4A0A0A6YYC5 116 aa4.16□□□□□ -1.74
PTPRD-203ENST00000381196 APOMO95445 188 aa4.16□□□□□ -1.74
PTPRD-203ENST00000381196 CEACAM21Q3KPI0 293 aa4.16□□□□□ -1.74
PTPRD-203ENST00000381196 UTF1Q5T230 341 aa4.16□□□□□ -1.74
PTPRD-203ENST00000381196 TEX38Q6PEX7 206 aa4.16□□□□□ -1.74
PTPRD-203ENST00000381196 NRN1Q9NPD7 142 aa4.16□□□□□ -1.74
PTPRD-203ENST00000381196 FZR1Q9UM11 496 aa4.16□□□□□ -1.74
PTPRD-203ENST00000381196 TCF20Q9UGU0 1960 aaKnown RBP4.16□□□□□ -1.74
PTPRD-203ENST00000381196 IGHV2OR16-5A0A0B4J2B6 119 aa4.16□□□□□ -1.74
PTPRD-203ENST00000381196 A0A1B0GTL3 188 aa4.16□□□□□ -1.74
PTPRD-203ENST00000381196 A0A1W2PRD5 423 aa4.16□□□□□ -1.74
PTPRD-203ENST00000381196 A0A1W2PRF3 423 aa4.16□□□□□ -1.74
PTPRD-203ENST00000381196 A0A1W2PRM7 423 aa4.16□□□□□ -1.74
PTPRD-203ENST00000381196 CCDC144NLQ6NUI1 221 aa4.16□□□□□ -1.74
PTPRD-203ENST00000381196 KIAA1549Q9HCM3 1950 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms