RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 U3KQA8 63 aa16.07■□□□□ 0.16
SH2B3-201ENST00000341259 SRRM5B3KS81 715 aa16.07■□□□□ 0.16
SH2B3-201ENST00000341259 SLC25A15Q9Y619 301 aa16.07■□□□□ 0.16
SH2B3-201ENST00000341259 SNCGO76070 127 aa16.06■□□□□ 0.16
SH2B3-201ENST00000341259 RSPO3Q9BXY4 272 aaPredicted RBP16.06■□□□□ 0.16
SH2B3-201ENST00000341259 IGHV3OR16-13A0A075B7E8 117 aa16.06■□□□□ 0.16
SH2B3-201ENST00000341259 IGHV3-74A0A0B4J1X5 117 aa16.06■□□□□ 0.16
SH2B3-201ENST00000341259 BTF3P20290 206 aaKnown RBP16.06■□□□□ 0.16
SH2B3-201ENST00000341259 DLX6P56179 175 aa16.06■□□□□ 0.16
SH2B3-201ENST00000341259 ATRAIDQ6UW56 229 aa16.06■□□□□ 0.16
SH2B3-201ENST00000341259 GRIFINA4D1Z8 144 aa16.06■□□□□ 0.16
SH2B3-201ENST00000341259 LILRA1O75019 489 aa16.06■□□□□ 0.16
SH2B3-201ENST00000341259 TEX45Q8NA69 505 aa16.06■□□□□ 0.16
SH2B3-201ENST00000341259 WNT10AQ9GZT5 417 aa16.06■□□□□ 0.16
SH2B3-201ENST00000341259 RPL13AP40429 203 aaKnown RBP16.05■□□□□ 0.16
SH2B3-201ENST00000341259 PET117Q6UWS5 81 aa16.05■□□□□ 0.16
SH2B3-201ENST00000341259 OR52E5Q8NH55 327 aa16.05■□□□□ 0.16
SH2B3-201ENST00000341259 C21orf62Q9NYP8 219 aa16.05■□□□□ 0.16
SH2B3-201ENST00000341259 PLXNA2O75051 1894 aa16.05■□□□□ 0.16
SH2B3-201ENST00000341259 FGF16O43320 207 aa16.05■□□□□ 0.16
SH2B3-201ENST00000341259 TMEM144Q7Z5S9 345 aa16.05■□□□□ 0.16
SH2B3-201ENST00000341259 OR4B1Q8NGF8 309 aa16.05■□□□□ 0.16
SH2B3-201ENST00000341259 VOPP1Q96AW1 172 aa16.05■□□□□ 0.16
SH2B3-201ENST00000341259 PEX7O00628 323 aa16.05■□□□□ 0.16
SH2B3-201ENST00000341259 OTX1P32242 354 aaPredicted RBP16.05■□□□□ 0.16
SH2B3-201ENST00000341259 RPLP1P05386 114 aaKnown RBP16.05■□□□□ 0.16
SH2B3-201ENST00000341259 TCTAP57738 103 aa16.05■□□□□ 0.16
SH2B3-201ENST00000341259 AP5S1Q9NUS5 200 aa16.05■□□□□ 0.16
SH2B3-201ENST00000341259 PSPNO60542 156 aa16.05■□□□□ 0.16
SH2B3-201ENST00000341259 SDF2L1Q9HCN8 221 aa16.05■□□□□ 0.16
SH2B3-201ENST00000341259 PHLDA3Q9Y5J5 127 aa16.05■□□□□ 0.16
SH2B3-201ENST00000341259 FOXI3A8MTJ6 420 aaPredicted RBP16.04■□□□□ 0.16
SH2B3-201ENST00000341259 CBLN1P23435 193 aa16.04■□□□□ 0.16
SH2B3-201ENST00000341259 NBR2O15453 112 aa16.04■□□□□ 0.16
SH2B3-201ENST00000341259 NAPSAO96009 420 aa16.04■□□□□ 0.16
SH2B3-201ENST00000341259 GPX1P07203 203 aa16.04■□□□□ 0.16
SH2B3-201ENST00000341259 IGHV3-66A0A0C4DH42 116 aa16.04■□□□□ 0.16
SH2B3-201ENST00000341259 FAM90A9PA6NNJ1 464 aa16.04■□□□□ 0.16
SH2B3-201ENST00000341259 THBDP07204 575 aa16.04■□□□□ 0.16
SH2B3-201ENST00000341259 IL36BQ9NZH7 164 aa16.04■□□□□ 0.16
SH2B3-201ENST00000341259 KIF26BQ2KJY2 2108 aa16.04■□□□□ 0.16
SH2B3-201ENST00000341259 SLC17A3O00476 420 aa16.04■□□□□ 0.16
SH2B3-201ENST00000341259 LEPROTL1O95214 131 aa16.04■□□□□ 0.16
SH2B3-201ENST00000341259 SPATA45Q537H7 98 aa16.04■□□□□ 0.16
SH2B3-201ENST00000341259 FREM3P0C091 2139 aa16.03■□□□□ 0.16
SH2B3-201ENST00000341259 A1L4Q6 167 aa16.03■□□□□ 0.16
SH2B3-201ENST00000341259 OR4C46A6NHA9 309 aa16.03■□□□□ 0.16
SH2B3-201ENST00000341259 SAPCD1Q5SSQ6 148 aa16.03■□□□□ 0.16
SH2B3-201ENST00000341259 CD177Q8N6Q3 437 aa16.03■□□□□ 0.16
SH2B3-201ENST00000341259 WFIKKN1Q96NZ8 548 aa16.03■□□□□ 0.16
SH2B3-201ENST00000341259 MAP1LC3AQ9H492 121 aa16.03■□□□□ 0.16
SH2B3-201ENST00000341259 IGHG3P01860 377 aa16.03■□□□□ 0.16
SH2B3-201ENST00000341259 NMUP48645 174 aa16.03■□□□□ 0.16
SH2B3-201ENST00000341259 CENPVQ7Z7K6 275 aaPredicted RBP16.03■□□□□ 0.16
SH2B3-201ENST00000341259 A0A087WWC5 75 aa16.02■□□□□ 0.16
SH2B3-201ENST00000341259 HLA-DRB1P01911 266 aa16.02■□□□□ 0.16
SH2B3-201ENST00000341259 SELLP14151 372 aa16.02■□□□□ 0.16
SH2B3-201ENST00000341259 HGFACQ04756 655 aa16.02■□□□□ 0.16
SH2B3-201ENST00000341259 ZNF581Q9P0T4 197 aa16.02■□□□□ 0.16
SH2B3-201ENST00000341259 GPR183P32249 361 aa16.02■□□□□ 0.16
SH2B3-201ENST00000341259 HBBP68871 147 aa16.02■□□□□ 0.16
SH2B3-201ENST00000341259 LY6DQ14210 128 aa16.02■□□□□ 0.16
SH2B3-201ENST00000341259 ELOVL1Q9BW60 279 aa16.02■□□□□ 0.16
SH2B3-201ENST00000341259 AUP1Q9Y679 476 aa16.02■□□□□ 0.16
SH2B3-201ENST00000341259 ANAPC1Q9H1A4 1944 aa16.02■□□□□ 0.15
SH2B3-201ENST00000341259 IGHV3-49A0A0A0MS15 119 aa16.02■□□□□ 0.15
SH2B3-201ENST00000341259 LINC00518Q8N0U6 118 aa16.02■□□□□ 0.15
SH2B3-201ENST00000341259 E9PQ18 207 aa16.02■□□□□ 0.15
SH2B3-201ENST00000341259 PRCDQ00LT1 54 aa16.02■□□□□ 0.15
SH2B3-201ENST00000341259 ZNF207O43670 478 aaKnown RBP16.01■□□□□ 0.15
SH2B3-201ENST00000341259 A6NDN8 102 aa16.01■□□□□ 0.15
SH2B3-201ENST00000341259 ETV2O00321 342 aaPredicted RBP16.01■□□□□ 0.15
SH2B3-201ENST00000341259 ZNF25P17030 456 aaPredicted RBP16.01■□□□□ 0.15
SH2B3-201ENST00000341259 LYRM7Q5U5X0 104 aa16.01■□□□□ 0.15
SH2B3-201ENST00000341259 METRNQ9UJH8 293 aa16.01■□□□□ 0.15
SH2B3-201ENST00000341259 MBD3L4A6NDZ8 208 aaPredicted RBP16.01■□□□□ 0.15
SH2B3-201ENST00000341259 MBD3L3A6NE82 208 aaPredicted RBP16.01■□□□□ 0.15
SH2B3-201ENST00000341259 MBD3L5A6NJ08 208 aaPredicted RBP16.01■□□□□ 0.15
SH2B3-201ENST00000341259 SRSF9Q13242 221 aaKnown RBP eCLIP16.01■□□□□ 0.15
SH2B3-201ENST00000341259 C5orf24Q7Z6I8 188 aa16.01■□□□□ 0.15
SH2B3-201ENST00000341259 MBD3L2Q8NHZ7 208 aaPredicted RBP16.01■□□□□ 0.15
SH2B3-201ENST00000341259 C2orf83Q53S99 150 aa16.01■□□□□ 0.15
SH2B3-201ENST00000341259 ASXL3Q9C0F0 2248 aa16.01■□□□□ 0.15
SH2B3-201ENST00000341259 SPTA1P02549 2419 aa16.01■□□□□ 0.15
SH2B3-201ENST00000341259 WISP1O95388 367 aa16.01■□□□□ 0.15
SH2B3-201ENST00000341259 PMCHL1Q16048 86 aa16.01■□□□□ 0.15
SH2B3-201ENST00000341259 FMC1Q96HJ9 113 aa16.01■□□□□ 0.15
SH2B3-201ENST00000341259 DUX5Q96PT3 197 aa16.01■□□□□ 0.15
SH2B3-201ENST00000341259 HIST1H1AQ02539 215 aaPredicted RBP16■□□□□ 0.15
SH2B3-201ENST00000341259 FAM53AQ6NSI3 398 aaPredicted RBP16■□□□□ 0.15
SH2B3-201ENST00000341259 C7orf69Q9H7B7 122 aa16■□□□□ 0.15
SH2B3-201ENST00000341259 CYTL1Q9NRR1 136 aa16■□□□□ 0.15
SH2B3-201ENST00000341259 Q6P435 159 aa16■□□□□ 0.15
SH2B3-201ENST00000341259 A0A0G2JNJ9 132 aa16■□□□□ 0.15
SH2B3-201ENST00000341259 DCAF16Q9NXF7 216 aa16■□□□□ 0.15
SH2B3-201ENST00000341259 Q9UFV3 132 aa16■□□□□ 0.15
SH2B3-201ENST00000341259 RPUSD1Q9UJJ7 312 aaKnown RBP16■□□□□ 0.15
SH2B3-201ENST00000341259 DLX1P56177 255 aa15.99■□□□□ 0.15
SH2B3-201ENST00000341259 CLEC19AQ6UXS0 136 aa15.99■□□□□ 0.15
SH2B3-201ENST00000341259 TMEM183AQ8IXX5 376 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms