RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 MBD3L2Q8NHZ7 208 aaPredicted RBP10.08□□□□□ -0.8
VPS33B-201ENST00000333371 ZCCHC14Q8WYQ9 949 aaKnown RBP10.08□□□□□ -0.8
VPS33B-201ENST00000333371 EAF1Q96JC9 268 aaPredicted RBP10.08□□□□□ -0.8
VPS33B-201ENST00000333371 RNF114Q9Y508 228 aa10.08□□□□□ -0.8
VPS33B-201ENST00000333371 TRGV8A0A0C4DH27 118 aa10.08□□□□□ -0.8
VPS33B-201ENST00000333371 ERVFC1-1P60608 527 aa10.08□□□□□ -0.8
VPS33B-201ENST00000333371 YPEL3P61236 119 aaPredicted RBP10.08□□□□□ -0.8
VPS33B-201ENST00000333371 KIAA1644Q3SXP7 199 aa10.08□□□□□ -0.8
VPS33B-201ENST00000333371 OR10W1Q8NGF6 305 aa10.08□□□□□ -0.8
VPS33B-201ENST00000333371 PPP1R35Q8TAP8 253 aa10.08□□□□□ -0.8
VPS33B-201ENST00000333371 CCL13Q99616 98 aa10.08□□□□□ -0.8
VPS33B-201ENST00000333371 ENY2Q9NPA8 101 aa10.08□□□□□ -0.8
VPS33B-201ENST00000333371 IL36BQ9NZH7 164 aa10.08□□□□□ -0.8
VPS33B-201ENST00000333371 OR51B2Q9Y5P1 312 aa10.08□□□□□ -0.8
VPS33B-201ENST00000333371 CUL9Q8IWT3 2517 aa10.07□□□□□ -0.8
VPS33B-201ENST00000333371 CRYABP02511 175 aaKnown RBP10.07□□□□□ -0.8
VPS33B-201ENST00000333371 PRR20EP86478 221 aa10.07□□□□□ -0.8
VPS33B-201ENST00000333371 PRR20CP86479 221 aa10.07□□□□□ -0.8
VPS33B-201ENST00000333371 PRR20DP86480 221 aa10.07□□□□□ -0.8
VPS33B-201ENST00000333371 PRR20BP86481 221 aa10.07□□□□□ -0.8
VPS33B-201ENST00000333371 PRR20AP86496 221 aa10.07□□□□□ -0.8
VPS33B-201ENST00000333371 CR1LQ2VPA4 569 aa10.07□□□□□ -0.8
VPS33B-201ENST00000333371 CENPWQ5EE01 88 aa10.07□□□□□ -0.8
VPS33B-201ENST00000333371 ZNF503Q96F45 646 aa10.07□□□□□ -0.8
VPS33B-201ENST00000333371 TP53TG5Q9Y2B4 290 aa10.07□□□□□ -0.8
VPS33B-201ENST00000333371 A0A1B0GWJ7 208 aa10.07□□□□□ -0.8
VPS33B-201ENST00000333371 SNURFLB1AK76 121 aa10.07□□□□□ -0.8
VPS33B-201ENST00000333371 FCN1O00602 326 aa10.07□□□□□ -0.8
VPS33B-201ENST00000333371 CRISP2P16562 243 aa10.07□□□□□ -0.8
VPS33B-201ENST00000333371 ZNF474Q6S9Z5 364 aaPredicted RBP10.07□□□□□ -0.8
VPS33B-201ENST00000333371 TOMM20LQ6UXN7 152 aa10.07□□□□□ -0.8
VPS33B-201ENST00000333371 PQLC2Q6ZP29 291 aa10.07□□□□□ -0.8
VPS33B-201ENST00000333371 MMD2Q8IY49 270 aa10.07□□□□□ -0.8
VPS33B-201ENST00000333371 NHLRC2Q8NBF2 726 aa10.07□□□□□ -0.8
VPS33B-201ENST00000333371 ST6GALNAC3Q8NDV1 305 aa10.07□□□□□ -0.8
VPS33B-201ENST00000333371 BEND2Q8NDZ0 799 aa10.07□□□□□ -0.8
VPS33B-201ENST00000333371 NABP2Q9BQ15 211 aa10.07□□□□□ -0.8
VPS33B-201ENST00000333371 ANKRD11Q6UB99 2663 aaPredicted RBP10.07□□□□□ -0.8
VPS33B-201ENST00000333371 KBTBD11-OT1A0A1B0GTJ5 212 aa10.06□□□□□ -0.8
VPS33B-201ENST00000333371 J3QR06 171 aa10.06□□□□□ -0.8
VPS33B-201ENST00000333371 LHBP01229 141 aa10.06□□□□□ -0.8
VPS33B-201ENST00000333371 IGHV3-48P01763 117 aa10.06□□□□□ -0.8
VPS33B-201ENST00000333371 RPL29P47914 159 aaKnown RBP10.06□□□□□ -0.8
VPS33B-201ENST00000333371 LGALS4P56470 323 aa10.06□□□□□ -0.8
VPS33B-201ENST00000333371 KLF3P57682 345 aaPredicted RBP10.06□□□□□ -0.8
VPS33B-201ENST00000333371 RBMXL3Q8N7X1 1067 aaKnown RBP10.06□□□□□ -0.8
VPS33B-201ENST00000333371 OR9G1Q8NH87 305 aa10.06□□□□□ -0.8
VPS33B-201ENST00000333371 HSPB9Q9BQS6 159 aa10.06□□□□□ -0.8
VPS33B-201ENST00000333371 TUBG2Q9NRH3 451 aa10.06□□□□□ -0.8
VPS33B-201ENST00000333371 FOXA2Q9Y261 457 aaPredicted RBP10.06□□□□□ -0.8
VPS33B-201ENST00000333371 V9GYV3 84 aa10.06□□□□□ -0.8
VPS33B-201ENST00000333371 ZZEF1O43149 2961 aa10.06□□□□□ -0.8
VPS33B-201ENST00000333371 K7EM74 188 aa10.06□□□□□ -0.8
VPS33B-201ENST00000333371 OR7C2O60412 319 aa10.06□□□□□ -0.8
VPS33B-201ENST00000333371 G0S2P27469 103 aa10.06□□□□□ -0.8
VPS33B-201ENST00000333371 C1orf185Q5T7R7 199 aa10.06□□□□□ -0.8
VPS33B-201ENST00000333371 MORN5Q5VZ52 161 aa10.06□□□□□ -0.8
VPS33B-201ENST00000333371 ZCCHC24Q8N2G6 241 aaKnown RBP10.06□□□□□ -0.8
VPS33B-201ENST00000333371 NEUROG1Q92886 237 aa10.06□□□□□ -0.8
VPS33B-201ENST00000333371 FAM103A1Q9BTL3 118 aaKnown RBP10.06□□□□□ -0.8
VPS33B-201ENST00000333371 GCM1Q9NP62 436 aa10.06□□□□□ -0.8
VPS33B-201ENST00000333371 ACACAQ13085 2346 aa10.06□□□□□ -0.8
VPS33B-201ENST00000333371 TCAPO15273 167 aa10.05□□□□□ -0.8
VPS33B-201ENST00000333371 OR10J1P30954 320 aa10.05□□□□□ -0.8
VPS33B-201ENST00000333371 C1orf194Q5T5A4 169 aa10.05□□□□□ -0.8
VPS33B-201ENST00000333371 TRGV10A0A0A0MS01 117 aa10.05□□□□□ -0.8
VPS33B-201ENST00000333371 TRAV5A0A0B4J249 113 aa10.05□□□□□ -0.8
VPS33B-201ENST00000333371 GGTLC3B5MD39 225 aa10.05□□□□□ -0.8
VPS33B-201ENST00000333371 CA1P00915 261 aaPredicted RBP10.05□□□□□ -0.8
VPS33B-201ENST00000333371 NUTF2P61970 127 aaKnown RBP10.05□□□□□ -0.8
VPS33B-201ENST00000333371 BAGE3Q86Y29 109 aa10.05□□□□□ -0.8
VPS33B-201ENST00000333371 BAGE2Q86Y30 109 aa10.05□□□□□ -0.8
VPS33B-201ENST00000333371 UHRF2Q96PU4 802 aa10.05□□□□□ -0.8
VPS33B-201ENST00000333371 TXNDC17Q9BRA2 123 aa10.05□□□□□ -0.8
VPS33B-201ENST00000333371 TMEM106BQ9NUM4 274 aa10.05□□□□□ -0.8
VPS33B-201ENST00000333371 SLC45A2Q9UMX9 530 aa10.05□□□□□ -0.8
VPS33B-201ENST00000333371 HELTA6NFD8 242 aa10.04□□□□□ -0.8
VPS33B-201ENST00000333371 CT45A6P0DMU7 189 aa10.04□□□□□ -0.8
VPS33B-201ENST00000333371 CT45A5P0DMU8 189 aa10.04□□□□□ -0.8
VPS33B-201ENST00000333371 CT45A7P0DMV0 189 aa10.04□□□□□ -0.8
VPS33B-201ENST00000333371 KIR2DS2P43631 304 aa10.04□□□□□ -0.8
VPS33B-201ENST00000333371 GNG4P50150 75 aa10.04□□□□□ -0.8
VPS33B-201ENST00000333371 RAB7AP51149 207 aa10.04□□□□□ -0.8
VPS33B-201ENST00000333371 SELENOTP62341 195 aa10.04□□□□□ -0.8
VPS33B-201ENST00000333371 SUMO1P63165 101 aaKnown RBP10.04□□□□□ -0.8
VPS33B-201ENST00000333371 SSBP2P81877 361 aaPredicted RBP10.04□□□□□ -0.8
VPS33B-201ENST00000333371 MZT1Q08AG7 82 aa10.04□□□□□ -0.8
VPS33B-201ENST00000333371 RAB31Q13636 194 aa10.04□□□□□ -0.8
VPS33B-201ENST00000333371 ZNF124Q15973 351 aa10.04□□□□□ -0.8
VPS33B-201ENST00000333371 RPEL1Q2QD12 228 aa10.04□□□□□ -0.8
VPS33B-201ENST00000333371 PRR31Q5SQ13 230 aa10.04□□□□□ -0.8
VPS33B-201ENST00000333371 ZNF705AQ6ZN79 300 aaPredicted RBP10.04□□□□□ -0.8
VPS33B-201ENST00000333371 ZNF439Q8NDP4 499 aa10.04□□□□□ -0.8
VPS33B-201ENST00000333371 VN1R17PQ8TDU5 208 aa10.04□□□□□ -0.8
VPS33B-201ENST00000333371 C11orf52Q96A22 123 aa10.04□□□□□ -0.8
VPS33B-201ENST00000333371 LINC00479Q96M42 142 aa10.04□□□□□ -0.8
VPS33B-201ENST00000333371 PLEKHA3Q9HB20 300 aa10.04□□□□□ -0.8
VPS33B-201ENST00000333371 PAM16Q9Y3D7 125 aa10.04□□□□□ -0.8
VPS33B-201ENST00000333371 FAM215AQ9Y5M1 114 aa10.04□□□□□ -0.8
VPS33B-201ENST00000333371 KIR2DL5BA0A0G2JN68 375 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms