RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 CXXC4Q9H2H0 198 aa9.9□□□□□ -0.83
USHBP1-201ENST00000252597 WIPI2Q9Y4P8 454 aa9.9□□□□□ -0.83
USHBP1-201ENST00000252597 AKAP13Q12802 2813 aa9.9□□□□□ -0.83
USHBP1-201ENST00000252597 WNT2P09544 360 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 CECR9P0C854 216 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 USF1P22415 310 aaPredicted RBP9.89□□□□□ -0.83
USHBP1-201ENST00000252597 PCP4P48539 62 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 RANP62826 216 aaKnown RBP9.89□□□□□ -0.83
USHBP1-201ENST00000252597 MRPS11P82912 194 aaKnown RBP9.89□□□□□ -0.83
USHBP1-201ENST00000252597 OR2D3Q8NGH3 330 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 EAF1Q96JC9 268 aaPredicted RBP9.89□□□□□ -0.83
USHBP1-201ENST00000252597 DNAJC4Q9NNZ3 241 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 NRN1Q9NPD7 142 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 IL36BQ9NZH7 164 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 TRBV6-6A0A0A6YYG2 114 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 A0A1W2PRD5 423 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 A0A1W2PRF3 423 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 A0A1W2PRM7 423 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 J3QR06 171 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 CHRNB4P30926 498 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 RAB7AP51149 207 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 UBE2L3P68036 154 aaKnown RBP9.89□□□□□ -0.83
USHBP1-201ENST00000252597 SLC35E4Q6ICL7 350 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 OR2V2Q96R30 315 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 NABP2Q9BQ15 211 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 NKX2-8O15522 239 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 ENSAO43768 121 aaKnown RBP9.89□□□□□ -0.83
USHBP1-201ENST00000252597 GFRA3O60609 400 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 PROP1O75360 226 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 CSN3P07498 182 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 STAG3L2P0CL84 134 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 STAG3L3P0CL85 134 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 ORM2P19652 201 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 PTTG1IPP53801 180 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 Q8TCH9 128 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 RALYQ9UKM9 306 aaKnown RBP9.89□□□□□ -0.83
USHBP1-201ENST00000252597 ARL2-SNX15V9GYD0 113 aa9.89□□□□□ -0.83
USHBP1-201ENST00000252597 SPENQ96T58 3664 aaKnown RBP9.88□□□□□ -0.83
USHBP1-201ENST00000252597 TNRC6BQ9UPQ9 1833 aaKnown RBP9.88□□□□□ -0.83
USHBP1-201ENST00000252597 IGHV3-72A0A0B4J1Y9 119 aa9.88□□□□□ -0.83
USHBP1-201ENST00000252597 DLEU1O43261 78 aa9.88□□□□□ -0.83
USHBP1-201ENST00000252597 PYYP10082 97 aa9.88□□□□□ -0.83
USHBP1-201ENST00000252597 BRS3P32247 399 aa9.88□□□□□ -0.83
USHBP1-201ENST00000252597 ERVK11-1P61568 191 aa9.88□□□□□ -0.83
USHBP1-201ENST00000252597 IBA57Q5T440 356 aaKnown RBP9.88□□□□□ -0.83
USHBP1-201ENST00000252597 H1FXQ92522 213 aaKnown RBP9.88□□□□□ -0.83
USHBP1-201ENST00000252597 CCL13Q99616 98 aa9.88□□□□□ -0.83
USHBP1-201ENST00000252597 LPAR2Q9HBW0 351 aa9.88□□□□□ -0.83
USHBP1-201ENST00000252597 COL5A1P20908 1838 aaPredicted RBP9.88□□□□□ -0.83
USHBP1-201ENST00000252597 RPL19P84098 196 aaKnown RBP9.88□□□□□ -0.83
USHBP1-201ENST00000252597 COA6Q5JTJ3 125 aaKnown RBP9.88□□□□□ -0.83
USHBP1-201ENST00000252597 OR4A47Q6IF82 309 aa9.88□□□□□ -0.83
USHBP1-201ENST00000252597 ZBTB34Q8NCN2 500 aa9.88□□□□□ -0.83
USHBP1-201ENST00000252597 ASCL2Q99929 193 aa9.88□□□□□ -0.83
USHBP1-201ENST00000252597 PMCHL2Q9BQD1 86 aa9.88□□□□□ -0.83
USHBP1-201ENST00000252597 MIEN1Q9BRT3 115 aa9.88□□□□□ -0.83
USHBP1-201ENST00000252597 OR51B2Q9Y5P1 312 aa9.88□□□□□ -0.83
USHBP1-201ENST00000252597 DYSFO75923 2080 aa9.88□□□□□ -0.83
USHBP1-201ENST00000252597 RELBQ01201 579 aa9.87□□□□□ -0.83
USHBP1-201ENST00000252597 NRN1LQ496H8 165 aa9.87□□□□□ -0.83
USHBP1-201ENST00000252597 MORN2Q502X0 79 aa9.87□□□□□ -0.83
USHBP1-201ENST00000252597 PEAR1Q5VY43 1037 aaPredicted RBP9.87□□□□□ -0.83
USHBP1-201ENST00000252597 OR2T6Q8NHC8 308 aa9.87□□□□□ -0.83
USHBP1-201ENST00000252597 PPP1R35Q8TAP8 253 aa9.87□□□□□ -0.83
USHBP1-201ENST00000252597 TP53TG3Q9ULZ0 132 aa9.87□□□□□ -0.83
USHBP1-201ENST00000252597 A0A1W2PN81 502 aa9.87□□□□□ -0.83
USHBP1-201ENST00000252597 FOXL1Q12952 345 aa9.87□□□□□ -0.83
USHBP1-201ENST00000252597 C10orf55Q5SWW7 151 aa9.87□□□□□ -0.83
USHBP1-201ENST00000252597 ETFRF1Q6IPR1 90 aa9.87□□□□□ -0.83
USHBP1-201ENST00000252597 UNQ5815/PRO19632Q6UWF5 114 aa9.87□□□□□ -0.83
USHBP1-201ENST00000252597 SH2D7A6NKC9 451 aaPredicted RBP9.87□□□□□ -0.83
USHBP1-201ENST00000252597 OPRK1P41145 380 aa9.87□□□□□ -0.83
USHBP1-201ENST00000252597 RPL8P62917 257 aaKnown RBP9.87□□□□□ -0.83
USHBP1-201ENST00000252597 GNG5P63218 68 aa9.87□□□□□ -0.83
USHBP1-201ENST00000252597 ITLN1Q8WWA0 313 aa9.87□□□□□ -0.83
USHBP1-201ENST00000252597 FAM168AQ92567 244 aa9.87□□□□□ -0.83
USHBP1-201ENST00000252597 ZGRF1Q86YA3 2104 aa9.86□□□□□ -0.83
USHBP1-201ENST00000252597 LNP1A1A4G5 178 aa9.86□□□□□ -0.83
USHBP1-201ENST00000252597 M0R2Z0 102 aa9.86□□□□□ -0.83
USHBP1-201ENST00000252597 SNAI2O43623 268 aa9.86□□□□□ -0.83
USHBP1-201ENST00000252597 FAM214BQ7L5A3 538 aa9.86□□□□□ -0.83
USHBP1-201ENST00000252597 OR5B3Q8NH48 314 aa9.86□□□□□ -0.83
USHBP1-201ENST00000252597 OR4S2Q8NH73 311 aa9.86□□□□□ -0.83
USHBP1-201ENST00000252597 CALYQ9NYX4 217 aa9.86□□□□□ -0.83
USHBP1-201ENST00000252597 TMPRSS2O15393 492 aa9.86□□□□□ -0.83
USHBP1-201ENST00000252597 APCSP02743 223 aa9.86□□□□□ -0.83
USHBP1-201ENST00000252597 IGKV1-16P04430 117 aa9.86□□□□□ -0.83
USHBP1-201ENST00000252597 TYMSP04818 313 aa9.86□□□□□ -0.83
USHBP1-201ENST00000252597 PAFAH1B2P68402 229 aa9.86□□□□□ -0.83
USHBP1-201ENST00000252597 CCL8P80075 99 aa9.86□□□□□ -0.83
USHBP1-201ENST00000252597 TPTE2P1Q5T6R2 138 aa9.86□□□□□ -0.83
USHBP1-201ENST00000252597 FAM216BQ8N7L0 139 aa9.86□□□□□ -0.83
USHBP1-201ENST00000252597 FER1L6-AS2Q96M78 137 aa9.86□□□□□ -0.83
USHBP1-201ENST00000252597 CLEC5AQ9NY25 188 aa9.86□□□□□ -0.83
USHBP1-201ENST00000252597 KIAA1549Q9HCM3 1950 aa9.86□□□□□ -0.83
USHBP1-201ENST00000252597 SAA2-SAA4A0A096LPE2 208 aa9.85□□□□□ -0.83
USHBP1-201ENST00000252597 NPIPB11E5RHQ5 1161 aa9.85□□□□□ -0.83
USHBP1-201ENST00000252597 TNFSF13O75888 250 aa9.85□□□□□ -0.83
USHBP1-201ENST00000252597 SAA2P0DJI9 122 aaPredicted RBP9.85□□□□□ -0.83
USHBP1-201ENST00000252597 RAB4AP20338 218 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms