RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 KLF5Q13887 457 aaPredicted RBP6.34□□□□□ -1.39
NEK3-209ENST00000618856 SCGB2B2Q4G0G5 96 aa6.34□□□□□ -1.39
NEK3-209ENST00000618856 PDLIM3Q53GG5 364 aaPredicted RBP6.34□□□□□ -1.39
NEK3-209ENST00000618856 REC114Q7Z4M0 266 aa6.34□□□□□ -1.39
NEK3-209ENST00000618856 ZNF429Q86V71 674 aa6.34□□□□□ -1.39
NEK3-209ENST00000618856 DMBX1Q8NFW5 382 aa6.34□□□□□ -1.39
NEK3-209ENST00000618856 OR5B3Q8NH48 314 aa6.34□□□□□ -1.39
NEK3-209ENST00000618856 GLYATL2Q8WU03 294 aa6.34□□□□□ -1.39
NEK3-209ENST00000618856 DLX4Q92988 240 aaPredicted RBP6.34□□□□□ -1.39
NEK3-209ENST00000618856 TMEM230Q96A57 120 aa6.34□□□□□ -1.39
NEK3-209ENST00000618856 GALNT14Q96FL9 552 aa6.34□□□□□ -1.39
NEK3-209ENST00000618856 OR5B12Q96R08 314 aa6.34□□□□□ -1.39
NEK3-209ENST00000618856 TSC22D3Q99576 134 aa6.34□□□□□ -1.39
NEK3-209ENST00000618856 QTRT1Q9BXR0 403 aaKnown RBP6.34□□□□□ -1.39
NEK3-209ENST00000618856 COMMD5Q9GZQ3 224 aa6.34□□□□□ -1.39
NEK3-209ENST00000618856 TMEM222Q9H0R3 208 aa6.34□□□□□ -1.39
NEK3-209ENST00000618856 RANGRFQ9HD47 186 aaPredicted RBP6.34□□□□□ -1.39
NEK3-209ENST00000618856 HRASLSQ9HDD0 168 aa6.34□□□□□ -1.39
NEK3-209ENST00000618856 COA4Q9NYJ1 87 aa6.34□□□□□ -1.39
NEK3-209ENST00000618856 FKBP11Q9NYL4 201 aa6.34□□□□□ -1.39
NEK3-209ENST00000618856 PRNDQ9UKY0 176 aa6.34□□□□□ -1.39
NEK3-209ENST00000618856 HUWE1Q7Z6Z7 4374 aaKnown RBP6.34□□□□□ -1.39
NEK3-209ENST00000618856 A0A0B4J293 547 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 TEX13DA0A0J9YY54 714 aaPredicted RBP6.33□□□□□ -1.4
NEK3-209ENST00000618856 C13orf42A0A1B0GVH6 325 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 PRH1P02810 166 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 SERPINE2P07093 398 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 TRAPPC2P0DI81 140 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 TRAPPC2BP0DI82 140 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 PGAM2P15259 253 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 INSL3P51460 131 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 AP3S2P59780 193 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 ERVK-16P61578 105 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 SUPT4H1P63272 117 aaKnown RBP6.33□□□□□ -1.4
NEK3-209ENST00000618856 RHOGP84095 191 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 BAK1Q16611 211 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 PYDC2Q56P42 97 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 FAM209BQ5JX69 171 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 SPANXN2Q5MJ10 180 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 PVRIGQ6DKI7 326 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 ACSM6Q6P461 480 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 IL34Q6ZMJ4 242 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 C19orf35Q6ZS72 473 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 CCDC71LQ8N9Z2 235 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 OR1L8Q8NGR8 309 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 LHFPL5Q8TAF8 219 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 DCUN1D4Q92564 292 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 LSM10Q969L4 123 aaKnown RBP6.33□□□□□ -1.4
NEK3-209ENST00000618856 TMEM56Q96MV1 263 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 NAA60Q9H7X0 242 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 AURKAIP1Q9NWT8 199 aaPredicted RBP6.33□□□□□ -1.4
NEK3-209ENST00000618856 COPZ2Q9P299 210 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 PEF1Q9UBV8 284 aaKnown RBP6.33□□□□□ -1.4
NEK3-209ENST00000618856 SCP2D1Q9UJQ7 156 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 OR51B2Q9Y5P1 312 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 TMEM56-RWDD3S4R434 201 aa6.33□□□□□ -1.4
NEK3-209ENST00000618856 COL7A1Q02388 2944 aa6.32□□□□□ -1.4
NEK3-209ENST00000618856 SNAPC5O75971 98 aa6.32□□□□□ -1.4
NEK3-209ENST00000618856 NDUFB8O95169 186 aa6.32□□□□□ -1.4
NEK3-209ENST00000618856 DHFRP00374 187 aa6.32□□□□□ -1.4
NEK3-209ENST00000618856 TRBV12-3P01733 135 aa6.32□□□□□ -1.4
NEK3-209ENST00000618856 HIST1H1BP16401 226 aaKnown RBP6.32□□□□□ -1.4
NEK3-209ENST00000618856 ZP3P21754 424 aa6.32□□□□□ -1.4
NEK3-209ENST00000618856 HOXD3P31249 432 aaPredicted RBP6.32□□□□□ -1.4
NEK3-209ENST00000618856 SLURP1P55000 103 aa6.32□□□□□ -1.4
NEK3-209ENST00000618856 MFAP2P55001 183 aa6.32□□□□□ -1.4
NEK3-209ENST00000618856 PRCDQ00LT1 54 aa6.32□□□□□ -1.4
NEK3-209ENST00000618856 DHODHQ02127 395 aa6.32□□□□□ -1.4
NEK3-209ENST00000618856 ATP5G2Q06055 141 aa6.32□□□□□ -1.4
NEK3-209ENST00000618856 C15orf32Q32M92 178 aa6.32□□□□□ -1.4
NEK3-209ENST00000618856 SP6Q3SY56 376 aa6.32□□□□□ -1.4
NEK3-209ENST00000618856 C9orf66Q5T8R8 295 aa6.32□□□□□ -1.4
NEK3-209ENST00000618856 Q6ZRM9 215 aa6.32□□□□□ -1.4
NEK3-209ENST00000618856 H2BFWTQ7Z2G1 175 aa6.32□□□□□ -1.4
NEK3-209ENST00000618856 TOMM5Q8N4H5 51 aa6.32□□□□□ -1.4
NEK3-209ENST00000618856 ZNF114Q8NC26 417 aa6.32□□□□□ -1.4
NEK3-209ENST00000618856 OR10W1Q8NGF6 305 aa6.32□□□□□ -1.4
NEK3-209ENST00000618856 DPF1Q92782 380 aa6.32□□□□□ -1.4
NEK3-209ENST00000618856 IL22RA2Q969J5 263 aa6.32□□□□□ -1.4
NEK3-209ENST00000618856 SCGB3A2Q96PL1 93 aa6.32□□□□□ -1.4
NEK3-209ENST00000618856 ATP6V0BQ99437 205 aa6.32□□□□□ -1.4
NEK3-209ENST00000618856 ZNF355PQ9NSJ1 428 aa6.32□□□□□ -1.4
NEK3-209ENST00000618856 SIGLEC8Q9NYZ4 499 aa6.32□□□□□ -1.4
NEK3-209ENST00000618856 C14orf166Q9Y224 244 aaKnown RBP6.32□□□□□ -1.4
NEK3-209ENST00000618856 NSG2Q9Y328 171 aa6.32□□□□□ -1.4
NEK3-209ENST00000618856 A0A0G2JRQ6 117 aa6.31□□□□□ -1.4
NEK3-209ENST00000618856 SEC14L6B5MCN3 397 aa6.31□□□□□ -1.4
NEK3-209ENST00000618856 BMPR1BO00238 502 aa6.31□□□□□ -1.4
NEK3-209ENST00000618856 OVOL1O14753 267 aa6.31□□□□□ -1.4
NEK3-209ENST00000618856 OR2J3O76001 311 aa6.31□□□□□ -1.4
NEK3-209ENST00000618856 ATG12O94817 140 aa6.31□□□□□ -1.4
NEK3-209ENST00000618856 OR5AC1P0C628 307 aa6.31□□□□□ -1.4
NEK3-209ENST00000618856 FAUP35544 74 aaKnown RBP6.31□□□□□ -1.4
NEK3-209ENST00000618856 MECP2P51608 486 aaKnown RBP6.31□□□□□ -1.4
NEK3-209ENST00000618856 HSPE1P61604 102 aaKnown RBP6.31□□□□□ -1.4
NEK3-209ENST00000618856 DEFA5Q01523 94 aa6.31□□□□□ -1.4
NEK3-209ENST00000618856 EXOSC2Q13868 293 aaKnown RBP6.31□□□□□ -1.4
NEK3-209ENST00000618856 TMEM187Q14656 261 aa6.31□□□□□ -1.4
NEK3-209ENST00000618856 FAM219AQ8IW50 185 aa6.31□□□□□ -1.4
NEK3-209ENST00000618856 SELENOHQ8IZQ5 122 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms