RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 ZNF146Q15072 292 aa5.84□□□□□ -1.47
CLCN3-211ENST00000613795 MPV17L2Q567V2 206 aa5.84□□□□□ -1.47
CLCN3-211ENST00000613795 SYT8Q8NBV8 401 aa5.84□□□□□ -1.47
CLCN3-211ENST00000613795 WFDC1Q9HC57 220 aa5.84□□□□□ -1.47
CLCN3-211ENST00000613795 YAE1D1Q9NRH1 226 aa5.84□□□□□ -1.47
CLCN3-211ENST00000613795 PEX7O00628 323 aa5.84□□□□□ -1.48
CLCN3-211ENST00000613795 CRXO43186 299 aaPredicted RBP5.84□□□□□ -1.48
CLCN3-211ENST00000613795 HBDP02042 147 aa5.84□□□□□ -1.48
CLCN3-211ENST00000613795 COX6B1P14854 86 aa5.84□□□□□ -1.48
CLCN3-211ENST00000613795 ANOS1P23352 680 aa5.84□□□□□ -1.48
CLCN3-211ENST00000613795 PRSS53Q2L4Q9 553 aa5.84□□□□□ -1.48
CLCN3-211ENST00000613795 ORMDL3Q8N138 153 aa5.84□□□□□ -1.48
CLCN3-211ENST00000613795 FER1L6-AS1Q8NA97 138 aa5.84□□□□□ -1.48
CLCN3-211ENST00000613795 SAP25Q8TEE9 199 aa5.84□□□□□ -1.48
CLCN3-211ENST00000613795 JPT1Q9UK76 154 aa5.84□□□□□ -1.48
CLCN3-211ENST00000613795 LY96Q9Y6Y9 160 aa5.84□□□□□ -1.48
CLCN3-211ENST00000613795 TAF1LQ8IZX4 1826 aa5.83□□□□□ -1.48
CLCN3-211ENST00000613795 PRSS2P07478 247 aa5.83□□□□□ -1.48
CLCN3-211ENST00000613795 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.83□□□□□ -1.48
CLCN3-211ENST00000613795 FADS6Q8N9I5 356 aa5.83□□□□□ -1.48
CLCN3-211ENST00000613795 FOXC2Q99958 501 aa5.83□□□□□ -1.48
CLCN3-211ENST00000613795 CCL21O00585 134 aa5.83□□□□□ -1.48
CLCN3-211ENST00000613795 IGKV1D-16P01601 117 aa5.83□□□□□ -1.48
CLCN3-211ENST00000613795 C10orf128Q5T292 105 aa5.83□□□□□ -1.48
CLCN3-211ENST00000613795 IDI2-AS1Q9NZ38 188 aa5.83□□□□□ -1.48
CLCN3-211ENST00000613795 TRAV5A0A0B4J249 113 aa5.83□□□□□ -1.48
CLCN3-211ENST00000613795 DPM2O94777 84 aa5.83□□□□□ -1.48
CLCN3-211ENST00000613795 ZNF585BQ52M93 769 aa5.83□□□□□ -1.48
CLCN3-211ENST00000613795 C1orf162Q8NEQ5 155 aaPredicted RBP5.83□□□□□ -1.48
CLCN3-211ENST00000613795 WDR90Q96KV7 1748 aa5.83□□□□□ -1.48
CLCN3-211ENST00000613795 ZNF385AQ96PM9 386 aaKnown RBP5.83□□□□□ -1.48
CLCN3-211ENST00000613795 MGST2Q99735 147 aa5.83□□□□□ -1.48
CLCN3-211ENST00000613795 SPXQ9BT56 116 aa5.83□□□□□ -1.48
CLCN3-211ENST00000613795 ZNF703Q9H7S9 590 aaPredicted RBP5.83□□□□□ -1.48
CLCN3-211ENST00000613795 H3BRM9 83 aa5.83□□□□□ -1.48
CLCN3-211ENST00000613795 IGLV3-19P01714 112 aa5.83□□□□□ -1.48
CLCN3-211ENST00000613795 OR9G9P0C7N8 305 aa5.83□□□□□ -1.48
CLCN3-211ENST00000613795 C3orf79P0CE67 100 aa5.83□□□□□ -1.48
CLCN3-211ENST00000613795 TIMP3P35625 211 aa5.83□□□□□ -1.48
CLCN3-211ENST00000613795 C11orf68Q9H3H3 251 aaKnown RBP5.83□□□□□ -1.48
CLCN3-211ENST00000613795 BEX4Q9NWD9 120 aaPredicted RBP5.83□□□□□ -1.48
CLCN3-211ENST00000613795 HS3ST3B1Q9Y662 390 aa5.83□□□□□ -1.48
CLCN3-211ENST00000613795 NUMA1Q14980 2115 aa5.83□□□□□ -1.48
CLCN3-211ENST00000613795 LOC105371242A0A075B767 164 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 PPIAL4CA0A0B4J2A2 164 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 PPIAL4GP0DN37 164 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 SSTR5P35346 364 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 Q0VG73 95 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 FHL5Q5TD97 284 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 PCSK4Q6UW60 755 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 DYNLRB2Q8TF09 96 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 TCF19Q9Y242 345 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 ANKRD31Q8N7Z5 1873 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 C9JCJ5 164 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 NPIPB6E9PJ23 425 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 GPX1P07203 203 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 PATE4P0C8F1 98 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 PSG4Q00888 419 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 TMEM78Q5T7P6 136 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 FAM90A1Q86YD7 464 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 TMEM256Q8N2U0 113 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 DLX4Q92988 240 aaPredicted RBP5.82□□□□□ -1.48
CLCN3-211ENST00000613795 ZNF488Q96MN9 340 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 TNFRSF19Q9NS68 423 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 CLEC5AQ9NY25 188 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 ARID1BQ8NFD5 2236 aaPredicted RBP5.82□□□□□ -1.48
CLCN3-211ENST00000613795 HIGD1CA8MV81 97 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 TMEM238C9JI98 176 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 TGFAP01135 160 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 FAM53AQ6NSI3 398 aaPredicted RBP5.82□□□□□ -1.48
CLCN3-211ENST00000613795 ADAMTSL5Q6ZMM2 481 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 SLC22A18ASQ8N1D0 253 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 Q8NFD4 153 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 A0A0J9YW62 118 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 CGAP01215 116 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 CCL2P13500 99 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 IL11P20809 199 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 PTGDSP41222 190 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 GAS1P54826 345 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 ID3Q02535 119 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 TFF3Q07654 80 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 KIR3DS1Q14943 382 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 RTN4RL2Q86UN3 420 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.82□□□□□ -1.48
CLCN3-211ENST00000613795 LHFPL6Q9Y693 200 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 TRBV20OR9-2A0A075B6H5 130 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 SP9P0CG40 484 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 OR5P3Q8WZ94 311 aa5.82□□□□□ -1.48
CLCN3-211ENST00000613795 KIAA1217Q5T5P2 1943 aa5.81□□□□□ -1.48
CLCN3-211ENST00000613795 COX6A1P12074 109 aa5.81□□□□□ -1.48
CLCN3-211ENST00000613795 RPL27AP46776 148 aaKnown RBP5.81□□□□□ -1.48
CLCN3-211ENST00000613795 DLX6P56179 175 aa5.81□□□□□ -1.48
CLCN3-211ENST00000613795 MST1LQ2TV78 715 aa5.81□□□□□ -1.48
CLCN3-211ENST00000613795 DLL3Q9NYJ7 618 aa5.81□□□□□ -1.48
CLCN3-211ENST00000613795 MYO16Q9Y6X6 1858 aa5.81□□□□□ -1.48
CLCN3-211ENST00000613795 MUC21A0A0G2JKD1 596 aa5.81□□□□□ -1.48
CLCN3-211ENST00000613795 MUC21A0A140T8X8 626 aa5.81□□□□□ -1.48
CLCN3-211ENST00000613795 A0A1W2PRE2 83 aa5.81□□□□□ -1.48
CLCN3-211ENST00000613795 A4D1N5 150 aa5.81□□□□□ -1.48
CLCN3-211ENST00000613795 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms