RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 NPIPB5A8MRT5 1133 aa12.89□□□□□ -0.35
IRF1-211ENST00000613424 I3L521 148 aa12.89□□□□□ -0.35
IRF1-211ENST00000613424 PF4P02776 101 aa12.89□□□□□ -0.35
IRF1-211ENST00000613424 PRH1P02810 166 aa12.89□□□□□ -0.35
IRF1-211ENST00000613424 CRYGCP07315 174 aa12.89□□□□□ -0.35
IRF1-211ENST00000613424 PSMB6P28072 239 aa12.89□□□□□ -0.35
IRF1-211ENST00000613424 DEFB136Q30KP8 78 aa12.89□□□□□ -0.35
IRF1-211ENST00000613424 TMEM268Q5VZI3 342 aa12.89□□□□□ -0.35
IRF1-211ENST00000613424 ETV3LQ6ZN32 361 aa12.89□□□□□ -0.35
IRF1-211ENST00000613424 C19orf35Q6ZS72 473 aa12.89□□□□□ -0.35
IRF1-211ENST00000613424 CENPSQ8N2Z9 138 aa12.89□□□□□ -0.35
IRF1-211ENST00000613424 OR10W1Q8NGF6 305 aa12.89□□□□□ -0.35
IRF1-211ENST00000613424 RAX2Q96IS3 184 aa12.89□□□□□ -0.35
IRF1-211ENST00000613424 DUX3Q96PT4 197 aa12.89□□□□□ -0.35
IRF1-211ENST00000613424 SRSF8Q9BRL6 282 aaKnown RBP12.89□□□□□ -0.35
IRF1-211ENST00000613424 HINT2Q9BX68 163 aa12.89□□□□□ -0.35
IRF1-211ENST00000613424 ZNF257Q9Y2Q1 563 aa12.89□□□□□ -0.35
IRF1-211ENST00000613424 IGLC7A0M8Q6 106 aa12.88□□□□□ -0.35
IRF1-211ENST00000613424 CCL24O00175 119 aa12.88□□□□□ -0.35
IRF1-211ENST00000613424 RBMXL2O75526 392 aaKnown RBP12.88□□□□□ -0.35
IRF1-211ENST00000613424 IGHV3-11P01762 117 aa12.88□□□□□ -0.35
IRF1-211ENST00000613424 REG1AP05451 166 aa12.88□□□□□ -0.35
IRF1-211ENST00000613424 ANXA3P12429 323 aa12.88□□□□□ -0.35
IRF1-211ENST00000613424 CTRB1P17538 263 aa12.88□□□□□ -0.35
IRF1-211ENST00000613424 MYCNOSP40205 109 aa12.88□□□□□ -0.35
IRF1-211ENST00000613424 RUNX1Q01196 453 aa12.88□□□□□ -0.35
IRF1-211ENST00000613424 CTRB2Q6GPI1 263 aa12.88□□□□□ -0.35
IRF1-211ENST00000613424 THOC7Q6I9Y2 204 aaKnown RBP12.88□□□□□ -0.35
IRF1-211ENST00000613424 OR5B3Q8NH48 314 aa12.88□□□□□ -0.35
IRF1-211ENST00000613424 RNASE11Q8TAA1 199 aaKnown RBP12.88□□□□□ -0.35
IRF1-211ENST00000613424 IL22RA2Q969J5 263 aa12.88□□□□□ -0.35
IRF1-211ENST00000613424 TRBV9A0A0B4J1U6 114 aa12.87□□□□□ -0.35
IRF1-211ENST00000613424 A0A0G2JLM5 398 aa12.87□□□□□ -0.35
IRF1-211ENST00000613424 UPK1BO75841 260 aa12.87□□□□□ -0.35
IRF1-211ENST00000613424 VAMP1P23763 118 aa12.87□□□□□ -0.35
IRF1-211ENST00000613424 HSPE1P61604 102 aaKnown RBP12.87□□□□□ -0.35
IRF1-211ENST00000613424 DEFA5Q01523 94 aa12.87□□□□□ -0.35
IRF1-211ENST00000613424 PPP1R1AQ13522 171 aa12.87□□□□□ -0.35
IRF1-211ENST00000613424 Q6ZRM9 215 aa12.87□□□□□ -0.35
IRF1-211ENST00000613424 FAM219AQ8IW50 185 aa12.87□□□□□ -0.35
IRF1-211ENST00000613424 OR11H1Q8NG94 326 aa12.87□□□□□ -0.35
IRF1-211ENST00000613424 GPR146Q96CH1 333 aa12.87□□□□□ -0.35
IRF1-211ENST00000613424 P2RX4Q99571 388 aa12.87□□□□□ -0.35
IRF1-211ENST00000613424 ALX4Q9H161 411 aaPredicted RBP12.87□□□□□ -0.35
IRF1-211ENST00000613424 TBC1D24Q9ULP9 559 aa12.87□□□□□ -0.35
IRF1-211ENST00000613424 C13orf42A0A1B0GVH6 325 aa12.86□□□□□ -0.35
IRF1-211ENST00000613424 SFT2D2O95562 160 aa12.86□□□□□ -0.35
IRF1-211ENST00000613424 LGALS1P09382 135 aaKnown RBP12.86□□□□□ -0.35
IRF1-211ENST00000613424 OR13C7P0DN81 318 aa12.86□□□□□ -0.35
IRF1-211ENST00000613424 RHOGP84095 191 aa12.86□□□□□ -0.35
IRF1-211ENST00000613424 IFITM3Q01628 133 aa12.86□□□□□ -0.35
IRF1-211ENST00000613424 WT1-ASQ06250 92 aa12.86□□□□□ -0.35
IRF1-211ENST00000613424 HSD17B13Q7Z5P4 300 aaPredicted RBP12.86□□□□□ -0.35
IRF1-211ENST00000613424 ZNF429Q86V71 674 aa12.86□□□□□ -0.35
IRF1-211ENST00000613424 MRPL41Q8IXM3 137 aaKnown RBP12.86□□□□□ -0.35
IRF1-211ENST00000613424 LGI3Q8N145 548 aa12.86□□□□□ -0.35
IRF1-211ENST00000613424 SLC35G3Q8N808 338 aa12.86□□□□□ -0.35
IRF1-211ENST00000613424 WFDC9Q8NEX5 89 aa12.86□□□□□ -0.35
IRF1-211ENST00000613424 OR1N2Q8NGR9 330 aa12.86□□□□□ -0.35
IRF1-211ENST00000613424 LSM10Q969L4 123 aaKnown RBP12.86□□□□□ -0.35
IRF1-211ENST00000613424 USMG5Q96IX5 58 aa12.86□□□□□ -0.35
IRF1-211ENST00000613424 FANCD2OSQ96PS1 177 aa12.86□□□□□ -0.35
IRF1-211ENST00000613424 MGAM2Q2M2H8 2515 aa12.86□□□□□ -0.35
IRF1-211ENST00000613424 ST8SIA3O43173 380 aa12.85□□□□□ -0.35
IRF1-211ENST00000613424 OR2J3O76001 311 aa12.85□□□□□ -0.35
IRF1-211ENST00000613424 DHFRP00374 187 aa12.85□□□□□ -0.35
IRF1-211ENST00000613424 DEFA4P12838 97 aa12.85□□□□□ -0.35
IRF1-211ENST00000613424 UBE2MP61081 183 aaKnown RBP12.85□□□□□ -0.35
IRF1-211ENST00000613424 SRPXP78539 464 aa12.85□□□□□ -0.35
IRF1-211ENST00000613424 PRCDQ00LT1 54 aa12.85□□□□□ -0.35
IRF1-211ENST00000613424 ASAH1Q13510 395 aa12.85□□□□□ -0.35
IRF1-211ENST00000613424 KLK9Q2XQG4 91 aa12.85□□□□□ -0.35
IRF1-211ENST00000613424 ANKRD55Q3KP44 614 aa12.85□□□□□ -0.35
IRF1-211ENST00000613424 LYZL2Q7Z4W2 148 aa12.85□□□□□ -0.35
IRF1-211ENST00000613424 LINC00482Q8N8I6 264 aa12.85□□□□□ -0.35
IRF1-211ENST00000613424 KLK9Q9UKQ9 250 aa12.85□□□□□ -0.35
IRF1-211ENST00000613424 A0A0B4J2A0 478 aa12.84□□□□□ -0.35
IRF1-211ENST00000613424 FAM223BA6NKX1 122 aa12.84□□□□□ -0.35
IRF1-211ENST00000613424 TCRBP04435 133 aa12.84□□□□□ -0.35
IRF1-211ENST00000613424 ANXA7P20073 488 aaKnown RBP12.84□□□□□ -0.35
IRF1-211ENST00000613424 CD33P20138 364 aa12.84□□□□□ -0.35
IRF1-211ENST00000613424 MECP2P51608 486 aaKnown RBP12.84□□□□□ -0.35
IRF1-211ENST00000613424 ATP5G2Q06055 141 aa12.84□□□□□ -0.35
IRF1-211ENST00000613424 FHL3Q13643 280 aa12.84□□□□□ -0.35
IRF1-211ENST00000613424 MZT2BQ6NZ67 158 aa12.84□□□□□ -0.35
IRF1-211ENST00000613424 FAM223AQ8IWN6 122 aa12.84□□□□□ -0.35
IRF1-211ENST00000613424 NECAP1Q8NC96 275 aa12.84□□□□□ -0.35
IRF1-211ENST00000613424 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.84□□□□□ -0.35
IRF1-211ENST00000613424 SHPKQ9UHJ6 478 aa12.84□□□□□ -0.35
IRF1-211ENST00000613424 FBXL7Q9UJT9 491 aa12.84□□□□□ -0.35
IRF1-211ENST00000613424 IGLV11-55A0A075B6I3 123 aa12.83□□□□□ -0.36
IRF1-211ENST00000613424 C9orf170A2RU37 121 aa12.83□□□□□ -0.36
IRF1-211ENST00000613424 NDUFB8O95169 186 aa12.83□□□□□ -0.36
IRF1-211ENST00000613424 IFNA17P01571 189 aa12.83□□□□□ -0.36
IRF1-211ENST00000613424 HSPB1P04792 205 aaKnown RBP12.83□□□□□ -0.36
IRF1-211ENST00000613424 OR4E1P0C645 316 aa12.83□□□□□ -0.36
IRF1-211ENST00000613424 HIST1H1BP16401 226 aaKnown RBP12.83□□□□□ -0.36
IRF1-211ENST00000613424 RAB25P57735 213 aa12.83□□□□□ -0.36
IRF1-211ENST00000613424 ZNF616Q08AN1 781 aa12.83□□□□□ -0.36
IRF1-211ENST00000613424 SPINK9Q5DT21 86 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms