RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 DEFA1P59665 94 aa8.77□□□□□ -1
CCL3L3-201ENST00000612839 DEFA3P59666 94 aa8.77□□□□□ -1
CCL3L3-201ENST00000612839 RUNX1Q01196 453 aa8.77□□□□□ -1
CCL3L3-201ENST00000612839 MRPL41Q8IXM3 137 aaKnown RBP8.77□□□□□ -1
CCL3L3-201ENST00000612839 LINC00482Q8N8I6 264 aa8.77□□□□□ -1
CCL3L3-201ENST00000612839 WFDC9Q8NEX5 89 aa8.77□□□□□ -1
CCL3L3-201ENST00000612839 GLYATL2Q8WU03 294 aa8.77□□□□□ -1
CCL3L3-201ENST00000612839 SCGB3A2Q96PL1 93 aa8.77□□□□□ -1
CCL3L3-201ENST00000612839 COMMD5Q9GZQ3 224 aa8.77□□□□□ -1
CCL3L3-201ENST00000612839 TMEM222Q9H0R3 208 aa8.77□□□□□ -1
CCL3L3-201ENST00000612839 ALX4Q9H161 411 aaPredicted RBP8.77□□□□□ -1
CCL3L3-201ENST00000612839 NBEAL1Q6ZS30 2694 aa8.77□□□□□ -1.01
CCL3L3-201ENST00000612839 TEX50A0A1B0GTY4 177 aa8.77□□□□□ -1.01
CCL3L3-201ENST00000612839 LINC00854A0A1B0GVQ3 168 aa8.77□□□□□ -1.01
CCL3L3-201ENST00000612839 IGLC7A0M8Q6 106 aa8.77□□□□□ -1.01
CCL3L3-201ENST00000612839 NPIPB5A8MRT5 1133 aa8.77□□□□□ -1.01
CCL3L3-201ENST00000612839 CDS2O95674 445 aa8.77□□□□□ -1.01
CCL3L3-201ENST00000612839 PRH1P02810 166 aa8.77□□□□□ -1.01
CCL3L3-201ENST00000612839 P0C879 139 aa8.77□□□□□ -1.01
CCL3L3-201ENST00000612839 INPP1P49441 399 aa8.77□□□□□ -1.01
CCL3L3-201ENST00000612839 DEFA5Q01523 94 aa8.77□□□□□ -1.01
CCL3L3-201ENST00000612839 FHL3Q13643 280 aa8.77□□□□□ -1.01
CCL3L3-201ENST00000612839 IZUMO4Q1ZYL8 232 aa8.77□□□□□ -1.01
CCL3L3-201ENST00000612839 C19orf35Q6ZS72 473 aa8.77□□□□□ -1.01
CCL3L3-201ENST00000612839 H2BFWTQ7Z2G1 175 aa8.77□□□□□ -1.01
CCL3L3-201ENST00000612839 OR11H1Q8NG94 326 aa8.77□□□□□ -1.01
CCL3L3-201ENST00000612839 LHFPL5Q8TAF8 219 aa8.77□□□□□ -1.01
CCL3L3-201ENST00000612839 QTRT1Q9BXR0 403 aaKnown RBP8.77□□□□□ -1.01
CCL3L3-201ENST00000612839 TMEM14BQ9NUH8 114 aa8.77□□□□□ -1.01
CCL3L3-201ENST00000612839 TRBV9A0A0B4J1U6 114 aa8.76□□□□□ -1.01
CCL3L3-201ENST00000612839 C15orf61A6NNL5 157 aa8.76□□□□□ -1.01
CCL3L3-201ENST00000612839 SNAPC5O75971 98 aa8.76□□□□□ -1.01
CCL3L3-201ENST00000612839 IGHV3-11P01762 117 aa8.76□□□□□ -1.01
CCL3L3-201ENST00000612839 CRYGCP07315 174 aa8.76□□□□□ -1.01
CCL3L3-201ENST00000612839 LGALS1P09382 135 aaKnown RBP8.76□□□□□ -1.01
CCL3L3-201ENST00000612839 AKR1C4P17516 323 aa8.76□□□□□ -1.01
CCL3L3-201ENST00000612839 CTRB1P17538 263 aa8.76□□□□□ -1.01
CCL3L3-201ENST00000612839 CD33P20138 364 aa8.76□□□□□ -1.01
CCL3L3-201ENST00000612839 PSMB6P28072 239 aa8.76□□□□□ -1.01
CCL3L3-201ENST00000612839 BTCP35070 178 aa8.76□□□□□ -1.01
CCL3L3-201ENST00000612839 CCR6P51684 374 aa8.76□□□□□ -1.01
CCL3L3-201ENST00000612839 SUPT4H1P63272 117 aaKnown RBP8.76□□□□□ -1.01
CCL3L3-201ENST00000612839 CTRB2Q6GPI1 263 aa8.76□□□□□ -1.01
CCL3L3-201ENST00000612839 SLC25A42Q86VD7 318 aa8.76□□□□□ -1.01
CCL3L3-201ENST00000612839 SGPP2Q8IWX5 399 aa8.76□□□□□ -1.01
CCL3L3-201ENST00000612839 OR10W1Q8NGF6 305 aa8.76□□□□□ -1.01
CCL3L3-201ENST00000612839 GALNT14Q96FL9 552 aa8.76□□□□□ -1.01
CCL3L3-201ENST00000612839 SLC25A21Q9BQT8 299 aaPredicted RBP8.76□□□□□ -1.01
CCL3L3-201ENST00000612839 NDUFA4L2Q9NRX3 87 aa8.76□□□□□ -1.01
CCL3L3-201ENST00000612839 PRNDQ9UKY0 176 aa8.76□□□□□ -1.01
CCL3L3-201ENST00000612839 ZNF257Q9Y2Q1 563 aa8.76□□□□□ -1.01
CCL3L3-201ENST00000612839 OR51B2Q9Y5P1 312 aa8.76□□□□□ -1.01
CCL3L3-201ENST00000612839 hCG_2014768A0A024R1R8 64 aa8.75□□□□□ -1.01
CCL3L3-201ENST00000612839 A0A0G2JRQ6 117 aa8.75□□□□□ -1.01
CCL3L3-201ENST00000612839 NAP1L6A6NFF2 107 aa8.75□□□□□ -1.01
CCL3L3-201ENST00000612839 LYRM1O43325 122 aa8.75□□□□□ -1.01
CCL3L3-201ENST00000612839 REG1AP05451 166 aa8.75□□□□□ -1.01
CCL3L3-201ENST00000612839 AKR1C2P52895 323 aa8.75□□□□□ -1.01
CCL3L3-201ENST00000612839 DHODHQ02127 395 aa8.75□□□□□ -1.01
CCL3L3-201ENST00000612839 WT1-ASQ06250 92 aa8.75□□□□□ -1.01
CCL3L3-201ENST00000612839 RBMS2Q15434 407 aaKnown RBP8.75□□□□□ -1.01
CCL3L3-201ENST00000612839 NRARPQ7Z6K4 114 aa8.75□□□□□ -1.01
CCL3L3-201ENST00000612839 TMED4Q7Z7H5 227 aa8.75□□□□□ -1.01
CCL3L3-201ENST00000612839 OR1L8Q8NGR8 309 aa8.75□□□□□ -1.01
CCL3L3-201ENST00000612839 OR1N2Q8NGR9 330 aa8.75□□□□□ -1.01
CCL3L3-201ENST00000612839 OR5B3Q8NH48 314 aa8.75□□□□□ -1.01
CCL3L3-201ENST00000612839 OR4A16Q8NH70 328 aa8.75□□□□□ -1.01
CCL3L3-201ENST00000612839 TMEM56Q96MV1 263 aa8.75□□□□□ -1.01
CCL3L3-201ENST00000612839 SRSF8Q9BRL6 282 aaKnown RBP8.75□□□□□ -1.01
CCL3L3-201ENST00000612839 FKBP11Q9NYL4 201 aa8.75□□□□□ -1.01
CCL3L3-201ENST00000612839 PRR13Q9NZ81 148 aa8.75□□□□□ -1.01
CCL3L3-201ENST00000612839 TMEM56-RWDD3S4R434 201 aa8.75□□□□□ -1.01
CCL3L3-201ENST00000612839 A0A0B4J293 547 aa8.74□□□□□ -1.01
CCL3L3-201ENST00000612839 A0A0G2JLM5 398 aa8.74□□□□□ -1.01
CCL3L3-201ENST00000612839 G3V4G9 280 aa8.74□□□□□ -1.01
CCL3L3-201ENST00000612839 ATG12O94817 140 aa8.74□□□□□ -1.01
CCL3L3-201ENST00000612839 TRAPPC2P0DI81 140 aa8.74□□□□□ -1.01
CCL3L3-201ENST00000612839 TRAPPC2BP0DI82 140 aa8.74□□□□□ -1.01
CCL3L3-201ENST00000612839 RHOGP84095 191 aa8.74□□□□□ -1.01
CCL3L3-201ENST00000612839 ZNF616Q08AN1 781 aa8.74□□□□□ -1.01
CCL3L3-201ENST00000612839 TMEM187Q14656 261 aa8.74□□□□□ -1.01
CCL3L3-201ENST00000612839 KLK9Q2XQG4 91 aa8.74□□□□□ -1.01
CCL3L3-201ENST00000612839 TMEM128Q5BJH2 165 aa8.74□□□□□ -1.01
CCL3L3-201ENST00000612839 OXLD1Q5BKU9 147 aa8.74□□□□□ -1.01
CCL3L3-201ENST00000612839 SAMD5Q5TGI4 173 aa8.74□□□□□ -1.01
CCL3L3-201ENST00000612839 THOC7Q6I9Y2 204 aaKnown RBP8.74□□□□□ -1.01
CCL3L3-201ENST00000612839 ZNF429Q86V71 674 aa8.74□□□□□ -1.01
CCL3L3-201ENST00000612839 SELENOHQ8IZQ5 122 aaKnown RBP8.74□□□□□ -1.01
CCL3L3-201ENST00000612839 RBPMSQ93062 196 aaKnown RBP8.74□□□□□ -1.01
CCL3L3-201ENST00000612839 USMG5Q96IX5 58 aa8.74□□□□□ -1.01
CCL3L3-201ENST00000612839 FANCD2OSQ96PS1 177 aa8.74□□□□□ -1.01
CCL3L3-201ENST00000612839 C7orf50Q9BRJ6 194 aaKnown RBP8.74□□□□□ -1.01
CCL3L3-201ENST00000612839 KLK9Q9UKQ9 250 aa8.74□□□□□ -1.01
CCL3L3-201ENST00000612839 KCNIP3Q9Y2W7 256 aa8.74□□□□□ -1.01
CCL3L3-201ENST00000612839 DMRT1Q9Y5R6 373 aa8.74□□□□□ -1.01
CCL3L3-201ENST00000612839 IGLV11-55A0A075B6I3 123 aa8.73□□□□□ -1.01
CCL3L3-201ENST00000612839 IGHV4OR15-8A0A075B7B6 117 aa8.73□□□□□ -1.01
CCL3L3-201ENST00000612839 A0A087WW49 117 aa8.73□□□□□ -1.01
CCL3L3-201ENST00000612839 C13orf42A0A1B0GVH6 325 aa8.73□□□□□ -1.01
CCL3L3-201ENST00000612839 FAM223BA6NKX1 122 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms