RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 RTBDNQ9BSG5 229 aaPredicted RBP12.99□□□□□ -0.33
TRIM28-215ENST00000601150 MCUBQ9NWR8 336 aa12.99□□□□□ -0.33
TRIM28-215ENST00000601150 FKBP11Q9NYL4 201 aa12.99□□□□□ -0.33
TRIM28-215ENST00000601150 NSG2Q9Y328 171 aa12.99□□□□□ -0.33
TRIM28-215ENST00000601150 OR51B2Q9Y5P1 312 aa12.99□□□□□ -0.33
TRIM28-215ENST00000601150 IGLC7A0M8Q6 106 aa12.98□□□□□ -0.33
TRIM28-215ENST00000601150 OR2J3O76001 311 aa12.98□□□□□ -0.33
TRIM28-215ENST00000601150 REG1AP05451 166 aa12.98□□□□□ -0.33
TRIM28-215ENST00000601150 TRAPPC2P0DI81 140 aa12.98□□□□□ -0.33
TRIM28-215ENST00000601150 TRAPPC2BP0DI82 140 aa12.98□□□□□ -0.33
TRIM28-215ENST00000601150 HIST1H1BP16401 226 aaKnown RBP12.98□□□□□ -0.33
TRIM28-215ENST00000601150 ZP3P21754 424 aa12.98□□□□□ -0.33
TRIM28-215ENST00000601150 EGFEM1PQ0D2K5 195 aa12.98□□□□□ -0.33
TRIM28-215ENST00000601150 EXOSC2Q13868 293 aaKnown RBP12.98□□□□□ -0.33
TRIM28-215ENST00000601150 KLF9Q13886 244 aaPredicted RBP12.98□□□□□ -0.33
TRIM28-215ENST00000601150 C19orf35Q6ZS72 473 aa12.98□□□□□ -0.33
TRIM28-215ENST00000601150 HSD17B13Q7Z5P4 300 aaPredicted RBP12.98□□□□□ -0.33
TRIM28-215ENST00000601150 TOMM5Q8N4H5 51 aa12.98□□□□□ -0.33
TRIM28-215ENST00000601150 DLX4Q92988 240 aaPredicted RBP12.98□□□□□ -0.33
TRIM28-215ENST00000601150 SCGB3A2Q96PL1 93 aa12.98□□□□□ -0.33
TRIM28-215ENST00000601150 PEF1Q9UBV8 284 aaKnown RBP12.98□□□□□ -0.33
TRIM28-215ENST00000601150 FBXL7Q9UJT9 491 aa12.98□□□□□ -0.33
TRIM28-215ENST00000601150 GPR132Q9UNW8 380 aa12.98□□□□□ -0.33
TRIM28-215ENST00000601150 C15orf61A6NNL5 157 aa12.97□□□□□ -0.33
TRIM28-215ENST00000601150 ATG12O94817 140 aa12.97□□□□□ -0.33
TRIM28-215ENST00000601150 DEFA4P12838 97 aa12.97□□□□□ -0.33
TRIM28-215ENST00000601150 TRIM16LQ309B1 348 aa12.97□□□□□ -0.33
TRIM28-215ENST00000601150 SP6Q3SY56 376 aa12.97□□□□□ -0.33
TRIM28-215ENST00000601150 GDPD1Q8N9F7 314 aa12.97□□□□□ -0.33
TRIM28-215ENST00000601150 OR10W1Q8NGF6 305 aa12.97□□□□□ -0.33
TRIM28-215ENST00000601150 OR4A16Q8NH70 328 aa12.97□□□□□ -0.33
TRIM28-215ENST00000601150 FANCD2OSQ96PS1 177 aa12.97□□□□□ -0.33
TRIM28-215ENST00000601150 HINT2Q9BX68 163 aa12.97□□□□□ -0.33
TRIM28-215ENST00000601150 C5orf66Q9H5L9 145 aa12.97□□□□□ -0.33
TRIM28-215ENST00000601150 NDUFA4L2Q9NRX3 87 aa12.97□□□□□ -0.33
TRIM28-215ENST00000601150 TMEM14BQ9NUH8 114 aa12.97□□□□□ -0.33
TRIM28-215ENST00000601150 AURKAIP1Q9NWT8 199 aaPredicted RBP12.97□□□□□ -0.33
TRIM28-215ENST00000601150 ZMAT5Q9UDW3 170 aaKnown RBP12.97□□□□□ -0.33
TRIM28-215ENST00000601150 TEX13DA0A0J9YY54 714 aaPredicted RBP12.96□□□□□ -0.33
TRIM28-215ENST00000601150 UCP1P25874 307 aa12.96□□□□□ -0.33
TRIM28-215ENST00000601150 KRTAP10-11P60412 298 aa12.96□□□□□ -0.33
TRIM28-215ENST00000601150 KLK9Q2XQG4 91 aa12.96□□□□□ -0.33
TRIM28-215ENST00000601150 C15orf32Q32M92 178 aa12.96□□□□□ -0.33
TRIM28-215ENST00000601150 FAM209BQ5JX69 171 aa12.96□□□□□ -0.33
TRIM28-215ENST00000601150 OR5B3Q8NH48 314 aa12.96□□□□□ -0.33
TRIM28-215ENST00000601150 DEDD2Q8WXF8 326 aa12.96□□□□□ -0.33
TRIM28-215ENST00000601150 LSM10Q969L4 123 aaKnown RBP12.96□□□□□ -0.33
TRIM28-215ENST00000601150 SRRQ9GZT4 340 aa12.96□□□□□ -0.33
TRIM28-215ENST00000601150 NAA60Q9H7X0 242 aa12.96□□□□□ -0.33
TRIM28-215ENST00000601150 KLK9Q9UKQ9 250 aa12.96□□□□□ -0.33
TRIM28-215ENST00000601150 IGLV11-55A0A075B6I3 123 aa12.95□□□□□ -0.34
TRIM28-215ENST00000601150 DBX1A6NMT0 343 aa12.95□□□□□ -0.34
TRIM28-215ENST00000601150 IGKV1-5P01602 117 aa12.95□□□□□ -0.34
TRIM28-215ENST00000601150 TRBV12-3P01733 135 aa12.95□□□□□ -0.34
TRIM28-215ENST00000601150 OR13C7P0DN81 318 aa12.95□□□□□ -0.34
TRIM28-215ENST00000601150 INSL3P51460 131 aa12.95□□□□□ -0.34
TRIM28-215ENST00000601150 AKR1C2P52895 323 aa12.95□□□□□ -0.34
TRIM28-215ENST00000601150 TMEM56Q96MV1 263 aa12.95□□□□□ -0.34
TRIM28-215ENST00000601150 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.94□□□□□ -0.34
TRIM28-215ENST00000601150 CRYM-AS1A6NIL9 109 aa12.94□□□□□ -0.34
TRIM28-215ENST00000601150 CYB5BO43169 146 aa12.94□□□□□ -0.34
TRIM28-215ENST00000601150 NDUFB8O95169 186 aa12.94□□□□□ -0.34
TRIM28-215ENST00000601150 OR5AC1P0C628 307 aa12.94□□□□□ -0.34
TRIM28-215ENST00000601150 DHODHQ02127 395 aa12.94□□□□□ -0.34
TRIM28-215ENST00000601150 WT1-ASQ06250 92 aa12.94□□□□□ -0.34
TRIM28-215ENST00000601150 ACSM6Q6P461 480 aa12.94□□□□□ -0.34
TRIM28-215ENST00000601150 TMEM222Q9H0R3 208 aa12.94□□□□□ -0.34
TRIM28-215ENST00000601150 CDS2O95674 445 aa12.93□□□□□ -0.34
TRIM28-215ENST00000601150 P0C879 139 aa12.93□□□□□ -0.34
TRIM28-215ENST00000601150 MECP2P51608 486 aaKnown RBP12.93□□□□□ -0.34
TRIM28-215ENST00000601150 KLF5Q13887 457 aaPredicted RBP12.93□□□□□ -0.34
TRIM28-215ENST00000601150 IZUMO4Q1ZYL8 232 aa12.93□□□□□ -0.34
TRIM28-215ENST00000601150 RPEL1Q2QD12 228 aa12.93□□□□□ -0.34
TRIM28-215ENST00000601150 ZNF57Q68EA5 555 aaPredicted RBP12.93□□□□□ -0.34
TRIM28-215ENST00000601150 ZNF429Q86V71 674 aa12.93□□□□□ -0.34
TRIM28-215ENST00000601150 SGPP2Q8IWX5 399 aa12.93□□□□□ -0.34
TRIM28-215ENST00000601150 GLYATL2Q8WU03 294 aa12.93□□□□□ -0.34
TRIM28-215ENST00000601150 EEF1AKMT3Q96AZ1 226 aa12.93□□□□□ -0.34
TRIM28-215ENST00000601150 RRNAD1Q96FB5 475 aaKnown RBP12.93□□□□□ -0.34
TRIM28-215ENST00000601150 THYN1Q9P016 225 aa12.93□□□□□ -0.34
TRIM28-215ENST00000601150 SAP30O75446 220 aa12.92□□□□□ -0.34
TRIM28-215ENST00000601150 INPP1P49441 399 aa12.92□□□□□ -0.34
TRIM28-215ENST00000601150 HSPE1P61604 102 aaKnown RBP12.92□□□□□ -0.34
TRIM28-215ENST00000601150 TATDN3Q17R31 274 aa12.92□□□□□ -0.34
TRIM28-215ENST00000601150 TRIQKQ629K1 86 aa12.92□□□□□ -0.34
TRIM28-215ENST00000601150 RNASE11Q8TAA1 199 aaKnown RBP12.92□□□□□ -0.34
TRIM28-215ENST00000601150 MRAPQ8TCY5 172 aa12.92□□□□□ -0.34
TRIM28-215ENST00000601150 TMEM230Q96A57 120 aa12.92□□□□□ -0.34
TRIM28-215ENST00000601150 CXorf58Q96LI9 332 aa12.92□□□□□ -0.34
TRIM28-215ENST00000601150 ELOVL1Q9BW60 279 aa12.92□□□□□ -0.34
TRIM28-215ENST00000601150 KCNIP3Q9Y2W7 256 aa12.92□□□□□ -0.34
TRIM28-215ENST00000601150 DMRT1Q9Y5R6 373 aa12.92□□□□□ -0.34
TRIM28-215ENST00000601150 BMPR1BO00238 502 aa12.91□□□□□ -0.34
TRIM28-215ENST00000601150 AKR1C4P17516 323 aa12.91□□□□□ -0.34
TRIM28-215ENST00000601150 SYNJ2BPP57105 145 aa12.91□□□□□ -0.34
TRIM28-215ENST00000601150 PRCDQ00LT1 54 aa12.91□□□□□ -0.34
TRIM28-215ENST00000601150 FAM219AQ8IW50 185 aa12.91□□□□□ -0.34
TRIM28-215ENST00000601150 LHFPL5Q8TAF8 219 aa12.91□□□□□ -0.34
TRIM28-215ENST00000601150 RBPMSQ93062 196 aaKnown RBP12.91□□□□□ -0.34
TRIM28-215ENST00000601150 OR4C12Q96R67 309 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms