RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 RAX2Q96IS3 184 aa15.27■□□□□ 0.04
SHKBP1-214ENST00000597396 A0A0G2JLM5 398 aa15.26■□□□□ 0.03
SHKBP1-214ENST00000597396 BRI3O95415 125 aa15.26■□□□□ 0.03
SHKBP1-214ENST00000597396 DHFRP00374 187 aa15.26■□□□□ 0.03
SHKBP1-214ENST00000597396 PRH1P02810 166 aa15.26■□□□□ 0.03
SHKBP1-214ENST00000597396 REG1AP05451 166 aa15.26■□□□□ 0.03
SHKBP1-214ENST00000597396 PSMB6P28072 239 aa15.26■□□□□ 0.03
SHKBP1-214ENST00000597396 IZUMO4Q1ZYL8 232 aa15.26■□□□□ 0.03
SHKBP1-214ENST00000597396 TMEM128Q5BJH2 165 aa15.26■□□□□ 0.03
SHKBP1-214ENST00000597396 TMEM268Q5VZI3 342 aa15.26■□□□□ 0.03
SHKBP1-214ENST00000597396 SELENOHQ8IZQ5 122 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-214ENST00000597396 CENPSQ8N2Z9 138 aa15.26■□□□□ 0.03
SHKBP1-214ENST00000597396 OR5B3Q8NH48 314 aa15.26■□□□□ 0.03
SHKBP1-214ENST00000597396 LHFPL5Q8TAF8 219 aa15.26■□□□□ 0.03
SHKBP1-214ENST00000597396 SRSF8Q9BRL6 282 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-214ENST00000597396 TMEM14BQ9NUH8 114 aa15.26■□□□□ 0.03
SHKBP1-214ENST00000597396 I3L521 148 aa15.25■□□□□ 0.03
SHKBP1-214ENST00000597396 LYRM1O43325 122 aa15.25■□□□□ 0.03
SHKBP1-214ENST00000597396 NDUFB6O95139 128 aa15.25■□□□□ 0.03
SHKBP1-214ENST00000597396 LGALS1P09382 135 aaKnown RBP15.25■□□□□ 0.03
SHKBP1-214ENST00000597396 MECP2P51608 486 aaKnown RBP15.25■□□□□ 0.03
SHKBP1-214ENST00000597396 RUNX1Q01196 453 aa15.25■□□□□ 0.03
SHKBP1-214ENST00000597396 DEFA5Q01523 94 aa15.25■□□□□ 0.03
SHKBP1-214ENST00000597396 DEFA6Q01524 100 aa15.25■□□□□ 0.03
SHKBP1-214ENST00000597396 TMEM187Q14656 261 aa15.25■□□□□ 0.03
SHKBP1-214ENST00000597396 OR11H1Q8NG94 326 aa15.25■□□□□ 0.03
SHKBP1-214ENST00000597396 OR10W1Q8NGF6 305 aa15.25■□□□□ 0.03
SHKBP1-214ENST00000597396 TMEM56Q96MV1 263 aa15.25■□□□□ 0.03
SHKBP1-214ENST00000597396 IGLC7A0M8Q6 106 aa15.24■□□□□ 0.03
SHKBP1-214ENST00000597396 DBX1A6NMT0 343 aa15.24■□□□□ 0.03
SHKBP1-214ENST00000597396 PLA2G10O15496 165 aa15.24■□□□□ 0.03
SHKBP1-214ENST00000597396 DEFA4P12838 97 aa15.24■□□□□ 0.03
SHKBP1-214ENST00000597396 CTRB1P17538 263 aa15.24■□□□□ 0.03
SHKBP1-214ENST00000597396 VAMP1P23763 118 aa15.24■□□□□ 0.03
SHKBP1-214ENST00000597396 BTCP35070 178 aa15.24■□□□□ 0.03
SHKBP1-214ENST00000597396 RAB25P57735 213 aa15.24■□□□□ 0.03
SHKBP1-214ENST00000597396 SUPT4H1P63272 117 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-214ENST00000597396 SRPXP78539 464 aa15.24■□□□□ 0.03
SHKBP1-214ENST00000597396 RHOGP84095 191 aa15.24■□□□□ 0.03
SHKBP1-214ENST00000597396 CTRB2Q6GPI1 263 aa15.24■□□□□ 0.03
SHKBP1-214ENST00000597396 C19orf35Q6ZS72 473 aa15.24■□□□□ 0.03
SHKBP1-214ENST00000597396 HSD17B13Q7Z5P4 300 aaPredicted RBP15.24■□□□□ 0.03
SHKBP1-214ENST00000597396 FAM219AQ8IW50 185 aa15.24■□□□□ 0.03
SHKBP1-214ENST00000597396 MRPL41Q8IXM3 137 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-214ENST00000597396 DPF1Q92782 380 aa15.24■□□□□ 0.03
SHKBP1-214ENST00000597396 IL22RA2Q969J5 263 aa15.24■□□□□ 0.03
SHKBP1-214ENST00000597396 LSM10Q969L4 123 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-214ENST00000597396 USMG5Q96IX5 58 aa15.24■□□□□ 0.03
SHKBP1-214ENST00000597396 P2RX4Q99571 388 aa15.24■□□□□ 0.03
SHKBP1-214ENST00000597396 ALX4Q9H161 411 aaPredicted RBP15.24■□□□□ 0.03
SHKBP1-214ENST00000597396 NDUFA4L2Q9NRX3 87 aa15.24■□□□□ 0.03
SHKBP1-214ENST00000597396 PRR13Q9NZ81 148 aa15.24■□□□□ 0.03
SHKBP1-214ENST00000597396 TMEM56-RWDD3S4R434 201 aa15.24■□□□□ 0.03
SHKBP1-214ENST00000597396 FAM223BA6NKX1 122 aa15.23■□□□□ 0.03
SHKBP1-214ENST00000597396 OR2J3O76001 311 aa15.23■□□□□ 0.03
SHKBP1-214ENST00000597396 CRYGCP07315 174 aa15.23■□□□□ 0.03
SHKBP1-214ENST00000597396 P0C879 139 aa15.23■□□□□ 0.03
SHKBP1-214ENST00000597396 OR13C7P0DN81 318 aa15.23■□□□□ 0.03
SHKBP1-214ENST00000597396 FAM223AQ8IWN6 122 aa15.23■□□□□ 0.03
SHKBP1-214ENST00000597396 LGI3Q8N145 548 aa15.23■□□□□ 0.03
SHKBP1-214ENST00000597396 LINC00482Q8N8I6 264 aa15.23■□□□□ 0.03
SHKBP1-214ENST00000597396 OR1N2Q8NGR9 330 aa15.23■□□□□ 0.03
SHKBP1-214ENST00000597396 PDCD10Q9BUL8 212 aa15.23■□□□□ 0.03
SHKBP1-214ENST00000597396 CMYA5Q8N3K9 4069 aa15.22■□□□□ 0.03
SHKBP1-214ENST00000597396 A0A0G2JRQ6 117 aa15.22■□□□□ 0.03
SHKBP1-214ENST00000597396 HIST1H1BP16401 226 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-214ENST00000597396 HSPE1P61604 102 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-214ENST00000597396 ZNF616Q08AN1 781 aa15.22■□□□□ 0.03
SHKBP1-214ENST00000597396 PDLIM3Q53GG5 364 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-214ENST00000597396 ZNF429Q86V71 674 aa15.22■□□□□ 0.03
SHKBP1-214ENST00000597396 SLC35G3Q8N808 338 aa15.22■□□□□ 0.03
SHKBP1-214ENST00000597396 FLVCR2Q9UPI3 526 aa15.22■□□□□ 0.03
SHKBP1-214ENST00000597396 NOTCH3Q9UM47 2321 aa15.21■□□□□ 0.03
SHKBP1-214ENST00000597396 TRBV9A0A0B4J1U6 114 aa15.21■□□□□ 0.03
SHKBP1-214ENST00000597396 A0A0B4J293 547 aa15.21■□□□□ 0.03
SHKBP1-214ENST00000597396 PIGBOS1A0A0B4J2F0 54 aa15.21■□□□□ 0.03
SHKBP1-214ENST00000597396 CYB5BO43169 146 aa15.21■□□□□ 0.03
SHKBP1-214ENST00000597396 IFNA17P01571 189 aa15.21■□□□□ 0.03
SHKBP1-214ENST00000597396 OR8U8P0C7N1 319 aa15.21■□□□□ 0.03
SHKBP1-214ENST00000597396 UBE2MP61081 183 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-214ENST00000597396 ATP5G2Q06055 141 aa15.21■□□□□ 0.03
SHKBP1-214ENST00000597396 PPP1R1AQ13522 171 aa15.21■□□□□ 0.03
SHKBP1-214ENST00000597396 NECAP1Q8NC96 275 aa15.21■□□□□ 0.03
SHKBP1-214ENST00000597396 FBXL7Q9UJT9 491 aa15.21■□□□□ 0.03
SHKBP1-214ENST00000597396 IGHV4OR15-8A0A075B7B6 117 aa15.2■□□□□ 0.02
SHKBP1-214ENST00000597396 A0A087WW49 117 aa15.2■□□□□ 0.02
SHKBP1-214ENST00000597396 A0A0B4J2A0 478 aa15.2■□□□□ 0.02
SHKBP1-214ENST00000597396 ANKRD34BA5PLL1 514 aa15.2■□□□□ 0.02
SHKBP1-214ENST00000597396 LINC01619G3V211 115 aa15.2■□□□□ 0.02
SHKBP1-214ENST00000597396 ST8SIA3O43173 380 aa15.2■□□□□ 0.02
SHKBP1-214ENST00000597396 UPK1BO75841 260 aa15.2■□□□□ 0.02
SHKBP1-214ENST00000597396 SFT2D2O95562 160 aa15.2■□□□□ 0.02
SHKBP1-214ENST00000597396 HSPB1P04792 205 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-214ENST00000597396 PRCDQ00LT1 54 aa15.2■□□□□ 0.02
SHKBP1-214ENST00000597396 WT1-ASQ06250 92 aa15.2■□□□□ 0.02
SHKBP1-214ENST00000597396 FHL3Q13643 280 aa15.2■□□□□ 0.02
SHKBP1-214ENST00000597396 EXOSC2Q13868 293 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-214ENST00000597396 WFDC9Q8NEX5 89 aa15.2■□□□□ 0.02
SHKBP1-214ENST00000597396 GPR146Q96CH1 333 aa15.2■□□□□ 0.02
SHKBP1-214ENST00000597396 FANCD2OSQ96PS1 177 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms