RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 PSMB6P28072 239 aa16.54■□□□□ 0.24
ATG4D-212ENST00000590096 RUNX1Q01196 453 aa16.54■□□□□ 0.24
ATG4D-212ENST00000590096 TMEM128Q5BJH2 165 aa16.54■□□□□ 0.24
ATG4D-212ENST00000590096 ETV3LQ6ZN32 361 aa16.54■□□□□ 0.24
ATG4D-212ENST00000590096 OR5B3Q8NH48 314 aa16.54■□□□□ 0.24
ATG4D-212ENST00000590096 RAX2Q96IS3 184 aa16.54■□□□□ 0.24
ATG4D-212ENST00000590096 TMEM14BQ9NUH8 114 aa16.54■□□□□ 0.24
ATG4D-212ENST00000590096 MEGF8Q7Z7M0 2845 aa16.54■□□□□ 0.24
ATG4D-212ENST00000590096 I3L521 148 aa16.53■□□□□ 0.24
ATG4D-212ENST00000590096 LYRM1O43325 122 aa16.53■□□□□ 0.24
ATG4D-212ENST00000590096 NDUFB6O95139 128 aa16.53■□□□□ 0.24
ATG4D-212ENST00000590096 IGHV3-11P01762 117 aa16.53■□□□□ 0.24
ATG4D-212ENST00000590096 PRH1P02810 166 aa16.53■□□□□ 0.24
ATG4D-212ENST00000590096 LGALS1P09382 135 aaKnown RBP16.53■□□□□ 0.24
ATG4D-212ENST00000590096 TMEM187Q14656 261 aa16.53■□□□□ 0.24
ATG4D-212ENST00000590096 TMEM268Q5VZI3 342 aa16.53■□□□□ 0.24
ATG4D-212ENST00000590096 HSD17B13Q7Z5P4 300 aaPredicted RBP16.53■□□□□ 0.24
ATG4D-212ENST00000590096 SELENOHQ8IZQ5 122 aaKnown RBP16.53■□□□□ 0.24
ATG4D-212ENST00000590096 CENPSQ8N2Z9 138 aa16.53■□□□□ 0.24
ATG4D-212ENST00000590096 OR11H1Q8NG94 326 aa16.53■□□□□ 0.24
ATG4D-212ENST00000590096 TMEM56Q96MV1 263 aa16.53■□□□□ 0.24
ATG4D-212ENST00000590096 DUX3Q96PT4 197 aa16.53■□□□□ 0.24
ATG4D-212ENST00000590096 NDUFA4L2Q9NRX3 87 aa16.53■□□□□ 0.24
ATG4D-212ENST00000590096 TMEM56-RWDD3S4R434 201 aa16.53■□□□□ 0.24
ATG4D-212ENST00000590096 REG1AP05451 166 aa16.52■□□□□ 0.24
ATG4D-212ENST00000590096 CRYGCP07315 174 aa16.52■□□□□ 0.24
ATG4D-212ENST00000590096 DEFA4P12838 97 aa16.52■□□□□ 0.24
ATG4D-212ENST00000590096 SUPT4H1P63272 117 aaKnown RBP16.52■□□□□ 0.24
ATG4D-212ENST00000590096 SRPXP78539 464 aa16.52■□□□□ 0.24
ATG4D-212ENST00000590096 IZUMO4Q1ZYL8 232 aa16.52■□□□□ 0.24
ATG4D-212ENST00000590096 FAM219AQ8IW50 185 aa16.52■□□□□ 0.24
ATG4D-212ENST00000590096 LHFPL5Q8TAF8 219 aa16.52■□□□□ 0.24
ATG4D-212ENST00000590096 IL22RA2Q969J5 263 aa16.52■□□□□ 0.24
ATG4D-212ENST00000590096 LSM10Q969L4 123 aaKnown RBP16.52■□□□□ 0.24
ATG4D-212ENST00000590096 USMG5Q96IX5 58 aa16.52■□□□□ 0.24
ATG4D-212ENST00000590096 P2RX4Q99571 388 aa16.52■□□□□ 0.24
ATG4D-212ENST00000590096 PIGBOS1A0A0B4J2F0 54 aa16.51■□□□□ 0.23
ATG4D-212ENST00000590096 IGLC7A0M8Q6 106 aa16.51■□□□□ 0.23
ATG4D-212ENST00000590096 FAM223BA6NKX1 122 aa16.51■□□□□ 0.23
ATG4D-212ENST00000590096 DBX1A6NMT0 343 aa16.51■□□□□ 0.23
ATG4D-212ENST00000590096 PLA2G10O15496 165 aa16.51■□□□□ 0.23
ATG4D-212ENST00000590096 P0C879 139 aa16.51■□□□□ 0.23
ATG4D-212ENST00000590096 CTRB1P17538 263 aa16.51■□□□□ 0.23
ATG4D-212ENST00000590096 VAMP1P23763 118 aa16.51■□□□□ 0.23
ATG4D-212ENST00000590096 BTCP35070 178 aa16.51■□□□□ 0.23
ATG4D-212ENST00000590096 MECP2P51608 486 aaKnown RBP16.51■□□□□ 0.23
ATG4D-212ENST00000590096 RAB25P57735 213 aa16.51■□□□□ 0.23
ATG4D-212ENST00000590096 RHOGP84095 191 aa16.51■□□□□ 0.23
ATG4D-212ENST00000590096 DEFA5Q01523 94 aa16.51■□□□□ 0.23
ATG4D-212ENST00000590096 CTRB2Q6GPI1 263 aa16.51■□□□□ 0.23
ATG4D-212ENST00000590096 FAM223AQ8IWN6 122 aa16.51■□□□□ 0.23
ATG4D-212ENST00000590096 MRPL41Q8IXM3 137 aaKnown RBP16.51■□□□□ 0.23
ATG4D-212ENST00000590096 OR10W1Q8NGF6 305 aa16.51■□□□□ 0.23
ATG4D-212ENST00000590096 OR1N2Q8NGR9 330 aa16.51■□□□□ 0.23
ATG4D-212ENST00000590096 DPF1Q92782 380 aa16.51■□□□□ 0.23
ATG4D-212ENST00000590096 PDCD10Q9BUL8 212 aa16.51■□□□□ 0.23
ATG4D-212ENST00000590096 OR13C7P0DN81 318 aa16.5■□□□□ 0.23
ATG4D-212ENST00000590096 UBE2MP61081 183 aaKnown RBP16.5■□□□□ 0.23
ATG4D-212ENST00000590096 ZNF616Q08AN1 781 aa16.5■□□□□ 0.23
ATG4D-212ENST00000590096 C19orf35Q6ZS72 473 aa16.5■□□□□ 0.23
ATG4D-212ENST00000590096 ZNF429Q86V71 674 aa16.5■□□□□ 0.23
ATG4D-212ENST00000590096 LGI3Q8N145 548 aa16.5■□□□□ 0.23
ATG4D-212ENST00000590096 LINC00482Q8N8I6 264 aa16.5■□□□□ 0.23
ATG4D-212ENST00000590096 NECAP1Q8NC96 275 aa16.5■□□□□ 0.23
ATG4D-212ENST00000590096 ALX4Q9H161 411 aaPredicted RBP16.5■□□□□ 0.23
ATG4D-212ENST00000590096 PRR13Q9NZ81 148 aa16.5■□□□□ 0.23
ATG4D-212ENST00000590096 TRBV9A0A0B4J1U6 114 aa16.49■□□□□ 0.23
ATG4D-212ENST00000590096 A0A0B4J293 547 aa16.49■□□□□ 0.23
ATG4D-212ENST00000590096 A0A0G2JRQ6 117 aa16.49■□□□□ 0.23
ATG4D-212ENST00000590096 CYB5BO43169 146 aa16.49■□□□□ 0.23
ATG4D-212ENST00000590096 OR2J3O76001 311 aa16.49■□□□□ 0.23
ATG4D-212ENST00000590096 OR8U8P0C7N1 319 aa16.49■□□□□ 0.23
ATG4D-212ENST00000590096 HIST1H1BP16401 226 aaKnown RBP16.49■□□□□ 0.23
ATG4D-212ENST00000590096 HSPE1P61604 102 aaKnown RBP16.49■□□□□ 0.23
ATG4D-212ENST00000590096 ATP5G2Q06055 141 aa16.49■□□□□ 0.23
ATG4D-212ENST00000590096 SLC35G3Q8N808 338 aa16.49■□□□□ 0.23
ATG4D-212ENST00000590096 WFDC9Q8NEX5 89 aa16.49■□□□□ 0.23
ATG4D-212ENST00000590096 LINC01619G3V211 115 aa16.48■□□□□ 0.23
ATG4D-212ENST00000590096 IFNA17P01571 189 aa16.48■□□□□ 0.23
ATG4D-212ENST00000590096 PRCDQ00LT1 54 aa16.48■□□□□ 0.23
ATG4D-212ENST00000590096 WT1-ASQ06250 92 aa16.48■□□□□ 0.23
ATG4D-212ENST00000590096 PPP1R1AQ13522 171 aa16.48■□□□□ 0.23
ATG4D-212ENST00000590096 FHL3Q13643 280 aa16.48■□□□□ 0.23
ATG4D-212ENST00000590096 FBXL7Q9UJT9 491 aa16.48■□□□□ 0.23
ATG4D-212ENST00000590096 FLVCR2Q9UPI3 526 aa16.48■□□□□ 0.23
ATG4D-212ENST00000590096 A0A0B4J2A0 478 aa16.47■□□□□ 0.23
ATG4D-212ENST00000590096 ST8SIA3O43173 380 aa16.47■□□□□ 0.23
ATG4D-212ENST00000590096 UPK1BO75841 260 aa16.47■□□□□ 0.23
ATG4D-212ENST00000590096 SFT2D2O95562 160 aa16.47■□□□□ 0.23
ATG4D-212ENST00000590096 HSPB1P04792 205 aaKnown RBP16.47■□□□□ 0.23
ATG4D-212ENST00000590096 EXOSC2Q13868 293 aaKnown RBP16.47■□□□□ 0.23
ATG4D-212ENST00000590096 C15orf32Q32M92 178 aa16.47■□□□□ 0.23
ATG4D-212ENST00000590096 MZT2BQ6NZ67 158 aa16.47■□□□□ 0.23
ATG4D-212ENST00000590096 GPR146Q96CH1 333 aa16.47■□□□□ 0.23
ATG4D-212ENST00000590096 RCC1LQ96I51 464 aaKnown RBP16.47■□□□□ 0.23
ATG4D-212ENST00000590096 FANCD2OSQ96PS1 177 aa16.47■□□□□ 0.23
ATG4D-212ENST00000590096 PLEKHA3Q9HB20 300 aa16.47■□□□□ 0.23
ATG4D-212ENST00000590096 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.47■□□□□ 0.23
ATG4D-212ENST00000590096 SHPKQ9UHJ6 478 aa16.47■□□□□ 0.23
ATG4D-212ENST00000590096 IGHV4OR15-8A0A075B7B6 117 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms