RNA–Protein interactions for RNA: ENST00000577474.2

TRAPPC8-203, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-203ENST00000577474 FAM236CP0DP71 79 aa2.39□□□□□ -2.03
TRAPPC8-203ENST00000577474 PPIBP23284 216 aaKnown RBP2.39□□□□□ -2.03
TRAPPC8-203ENST00000577474 HIST1H2BOP23527 126 aa2.39□□□□□ -2.03
TRAPPC8-203ENST00000577474 HIST1H2BBP33778 126 aa2.39□□□□□ -2.03
TRAPPC8-203ENST00000577474 HIST1H2BDP58876 126 aa2.39□□□□□ -2.03
TRAPPC8-203ENST00000577474 HIST1H2BCP62807 126 aa2.39□□□□□ -2.03
TRAPPC8-203ENST00000577474 RPL18Q07020 188 aaKnown RBP2.39□□□□□ -2.03
TRAPPC8-203ENST00000577474 HIST2H2BEQ16778 126 aa2.39□□□□□ -2.03
TRAPPC8-203ENST00000577474 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC8-203ENST00000577474 KRTAP5-7Q6L8G8 165 aa2.39□□□□□ -2.03
TRAPPC8-203ENST00000577474 HCP5Q6MZN7 132 aa2.39□□□□□ -2.03
TRAPPC8-203ENST00000577474 LYZL1Q6UWQ5 148 aa2.39□□□□□ -2.03
TRAPPC8-203ENST00000577474 HIST1H2BHQ93079 126 aa2.39□□□□□ -2.03
TRAPPC8-203ENST00000577474 HIST1H2BNQ99877 126 aa2.39□□□□□ -2.03
TRAPPC8-203ENST00000577474 HIST1H2BMQ99879 126 aa2.39□□□□□ -2.03
TRAPPC8-203ENST00000577474 PARVBQ9HBI1 364 aa2.39□□□□□ -2.03
TRAPPC8-203ENST00000577474 ENY2Q9NPA8 101 aa2.39□□□□□ -2.03
TRAPPC8-203ENST00000577474 CISHQ9NSE2 258 aa2.39□□□□□ -2.03
TRAPPC8-203ENST00000577474 IL36BQ9NZH7 164 aa2.39□□□□□ -2.03
TRAPPC8-203ENST00000577474 TIMM9Q9Y5J7 89 aa2.39□□□□□ -2.03
TRAPPC8-203ENST00000577474 C11orf86A6NJI1 115 aa2.38□□□□□ -2.03
TRAPPC8-203ENST00000577474 FAM159BA6NKW6 160 aa2.38□□□□□ -2.03
TRAPPC8-203ENST00000577474 FABP5P3A8MUU1 101 aa2.38□□□□□ -2.03
TRAPPC8-203ENST00000577474 ZNF73O43830 326 aaPredicted RBP2.38□□□□□ -2.03
TRAPPC8-203ENST00000577474 DSCAMO60469 2012 aa2.38□□□□□ -2.03
TRAPPC8-203ENST00000577474 IGKV4-1P06312 121 aa2.38□□□□□ -2.03
TRAPPC8-203ENST00000577474 C8GP07360 202 aa2.38□□□□□ -2.03
TRAPPC8-203ENST00000577474 NFYAP23511 347 aaPredicted RBP2.38□□□□□ -2.03
TRAPPC8-203ENST00000577474 MSNP26038 577 aaKnown RBP2.38□□□□□ -2.03
TRAPPC8-203ENST00000577474 RPS20P60866 119 aaKnown RBP2.38□□□□□ -2.03
TRAPPC8-203ENST00000577474 C12orf74Q32Q52 190 aa2.38□□□□□ -2.03
TRAPPC8-203ENST00000577474 ZNF705AQ6ZN79 300 aaPredicted RBP2.38□□□□□ -2.03
TRAPPC8-203ENST00000577474 DYNAPQ8N1N2 210 aa2.38□□□□□ -2.03
TRAPPC8-203ENST00000577474 SLC35F6Q8N357 371 aa2.38□□□□□ -2.03
TRAPPC8-203ENST00000577474 OR11H6Q8NGC7 330 aa2.38□□□□□ -2.03
TRAPPC8-203ENST00000577474 PHOSPHO2Q8TCD6 241 aa2.38□□□□□ -2.03
TRAPPC8-203ENST00000577474 SLC7A6Q92536 515 aa2.38□□□□□ -2.03
TRAPPC8-203ENST00000577474 KLK6Q92876 244 aa2.38□□□□□ -2.03
TRAPPC8-203ENST00000577474 C2orf50Q96LR7 162 aa2.38□□□□□ -2.03
TRAPPC8-203ENST00000577474 ERMAPQ96PL5 475 aaPredicted RBP2.38□□□□□ -2.03
TRAPPC8-203ENST00000577474 UQCC1Q9NVA1 299 aa2.38□□□□□ -2.03
TRAPPC8-203ENST00000577474 C14orf105Q9NVL8 296 aa2.38□□□□□ -2.03
TRAPPC8-203ENST00000577474 V9GYQ6 96 aa2.38□□□□□ -2.03
TRAPPC8-203ENST00000577474 DHX57Q6P158 1386 aaKnown RBP2.37□□□□□ -2.03
TRAPPC8-203ENST00000577474 hCG_1818297A0A087WSY0 165 aa2.37□□□□□ -2.03
TRAPPC8-203ENST00000577474 A8MT66 165 aa2.37□□□□□ -2.03
TRAPPC8-203ENST00000577474 SULT1A3P0DMM9 295 aa2.37□□□□□ -2.03
TRAPPC8-203ENST00000577474 SULT1A4P0DMN0 295 aa2.37□□□□□ -2.03
TRAPPC8-203ENST00000577474 TPI1P60174 286 aa2.37□□□□□ -2.03
TRAPPC8-203ENST00000577474 HSPE1P61604 102 aaKnown RBP2.37□□□□□ -2.03
TRAPPC8-203ENST00000577474 SPANXN3Q5MJ09 141 aa2.37□□□□□ -2.03
TRAPPC8-203ENST00000577474 AGTRAPQ6RW13 159 aa2.37□□□□□ -2.03
TRAPPC8-203ENST00000577474 SLC35E3Q7Z769 313 aa2.37□□□□□ -2.03
TRAPPC8-203ENST00000577474 Q9BRP9 147 aa2.37□□□□□ -2.03
TRAPPC8-203ENST00000577474 TTTY13Q9BZ97 58 aa2.37□□□□□ -2.03
TRAPPC8-203ENST00000577474 ATPIF1Q9UII2 106 aa2.37□□□□□ -2.03
TRAPPC8-203ENST00000577474 HHLA3Q9XRX5 114 aa2.37□□□□□ -2.03
TRAPPC8-203ENST00000577474 ZNF407Q9C0G0 2248 aa2.37□□□□□ -2.03
TRAPPC8-203ENST00000577474 NACADO15069 1562 aa2.36□□□□□ -2.03
TRAPPC8-203ENST00000577474 IGHV3-64A0A075B6Q5 118 aa2.36□□□□□ -2.03
TRAPPC8-203ENST00000577474 MUC21A0A0G2JKD1 596 aa2.36□□□□□ -2.03
TRAPPC8-203ENST00000577474 MUC21A0A140T8X8 626 aa2.36□□□□□ -2.03
TRAPPC8-203ENST00000577474 TMEM238C9JI98 176 aa2.36□□□□□ -2.03
TRAPPC8-203ENST00000577474 ZNF189O75820 626 aaPredicted RBP2.36□□□□□ -2.03
TRAPPC8-203ENST00000577474 ZNF682O95780 498 aa2.36□□□□□ -2.03
TRAPPC8-203ENST00000577474 RAB14P61106 215 aa2.36□□□□□ -2.03
TRAPPC8-203ENST00000577474 RUNX1Q01196 453 aa2.36□□□□□ -2.03
TRAPPC8-203ENST00000577474 ZNF90Q03938 601 aa2.36□□□□□ -2.03
TRAPPC8-203ENST00000577474 AADACL3Q5VUY0 350 aa2.36□□□□□ -2.03
TRAPPC8-203ENST00000577474 PP632Q6XCG6 107 aa2.36□□□□□ -2.03
TRAPPC8-203ENST00000577474 RPP25LQ8N5L8 163 aaKnown RBP2.36□□□□□ -2.03
TRAPPC8-203ENST00000577474 GPR146Q96CH1 333 aa2.36□□□□□ -2.03
TRAPPC8-203ENST00000577474 DNAJC30Q96LL9 226 aa2.36□□□□□ -2.03
TRAPPC8-203ENST00000577474 IMMP2LQ96T52 175 aa2.36□□□□□ -2.03
TRAPPC8-203ENST00000577474 SELENOSQ9BQE4 189 aa2.36□□□□□ -2.03
TRAPPC8-203ENST00000577474 DERL1Q9BUN8 251 aa2.36□□□□□ -2.03
TRAPPC8-203ENST00000577474 RNASE7Q9H1E1 156 aaKnown RBP2.36□□□□□ -2.03
TRAPPC8-203ENST00000577474 C11orf68Q9H3H3 251 aaKnown RBP2.36□□□□□ -2.03
TRAPPC8-203ENST00000577474 TVP23BQ9NYZ1 205 aa2.36□□□□□ -2.03
TRAPPC8-203ENST00000577474 PYCARDQ9ULZ3 195 aa2.36□□□□□ -2.03
TRAPPC8-203ENST00000577474 CCL26Q9Y258 94 aa2.36□□□□□ -2.03
TRAPPC8-203ENST00000577474 TRPM3Q9HCF6 1732 aaPredicted RBP2.36□□□□□ -2.03
TRAPPC8-203ENST00000577474 PCF11O94913 1555 aaKnown RBP2.36□□□□□ -2.03
TRAPPC8-203ENST00000577474 ROCK1Q13464 1354 aa2.36□□□□□ -2.03
TRAPPC8-203ENST00000577474 TRAV41A0A0B4J266 112 aa2.35□□□□□ -2.03
TRAPPC8-203ENST00000577474 MDFIC2A0A1B0GVS7 189 aa2.35□□□□□ -2.03
TRAPPC8-203ENST00000577474 GGT3PA6NGU5 568 aa2.35□□□□□ -2.03
TRAPPC8-203ENST00000577474 C19orf84I3L1E1 186 aa2.35□□□□□ -2.03
TRAPPC8-203ENST00000577474 SLC22A1O15245 554 aa2.35□□□□□ -2.03
TRAPPC8-203ENST00000577474 IGHV3-7P01780 117 aa2.35□□□□□ -2.03
TRAPPC8-203ENST00000577474 BPGMP07738 259 aa2.35□□□□□ -2.03
TRAPPC8-203ENST00000577474 IFI30P13284 250 aa2.35□□□□□ -2.03
TRAPPC8-203ENST00000577474 CBR1P16152 277 aa2.35□□□□□ -2.03
TRAPPC8-203ENST00000577474 LGALS3P17931 250 aaKnown RBP2.35□□□□□ -2.03
TRAPPC8-203ENST00000577474 ERP29P30040 261 aaKnown RBP2.35□□□□□ -2.03
TRAPPC8-203ENST00000577474 MEF2BQ02080 365 aaPredicted RBP2.35□□□□□ -2.03
TRAPPC8-203ENST00000577474 S100A7AQ86SG5 101 aa2.35□□□□□ -2.03
TRAPPC8-203ENST00000577474 RNF122Q9H9V4 155 aa2.35□□□□□ -2.03
TRAPPC8-203ENST00000577474 LCTP09848 1927 aa2.34□□□□□ -2.03
TRAPPC8-203ENST00000577474 TRAV7A0A075B6U4 112 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms