RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 CDS2O95674 445 aa8.58□□□□□ -1.04
CHD3-216ENST00000573936 TRAPPC2P0DI81 140 aa8.58□□□□□ -1.04
CHD3-216ENST00000573936 TRAPPC2BP0DI82 140 aa8.58□□□□□ -1.04
CHD3-216ENST00000573936 AKR1C4P17516 323 aa8.58□□□□□ -1.04
CHD3-216ENST00000573936 AKR1C2P52895 323 aa8.58□□□□□ -1.04
CHD3-216ENST00000573936 OR2B8PP59922 312 aa8.58□□□□□ -1.04
CHD3-216ENST00000573936 SRPXP78539 464 aa8.58□□□□□ -1.04
CHD3-216ENST00000573936 RUNX1Q01196 453 aa8.58□□□□□ -1.04
CHD3-216ENST00000573936 KIAA0141Q14154 515 aaPredicted RBP8.58□□□□□ -1.04
CHD3-216ENST00000573936 TMEM128Q5BJH2 165 aa8.58□□□□□ -1.04
CHD3-216ENST00000573936 C10orf55Q5SWW7 151 aa8.58□□□□□ -1.04
CHD3-216ENST00000573936 C8orf86Q6ZUL3 223 aa8.58□□□□□ -1.04
CHD3-216ENST00000573936 MRPL41Q8IXM3 137 aaKnown RBP8.58□□□□□ -1.04
CHD3-216ENST00000573936 ADAD2Q8NCV1 583 aaKnown RBP8.58□□□□□ -1.04
CHD3-216ENST00000573936 OR5B3Q8NH48 314 aa8.58□□□□□ -1.04
CHD3-216ENST00000573936 RNASE11Q8TAA1 199 aaKnown RBP8.58□□□□□ -1.04
CHD3-216ENST00000573936 GLYATL2Q8WU03 294 aa8.58□□□□□ -1.04
CHD3-216ENST00000573936 RBPMSQ93062 196 aaKnown RBP8.58□□□□□ -1.04
CHD3-216ENST00000573936 IL22RA2Q969J5 263 aa8.58□□□□□ -1.04
CHD3-216ENST00000573936 USMG5Q96IX5 58 aa8.58□□□□□ -1.04
CHD3-216ENST00000573936 TMEM56Q96MV1 263 aa8.58□□□□□ -1.04
CHD3-216ENST00000573936 MS4A10Q96PG2 267 aa8.58□□□□□ -1.04
CHD3-216ENST00000573936 QTRT1Q9BXR0 403 aaKnown RBP8.58□□□□□ -1.04
CHD3-216ENST00000573936 ZNF257Q9Y2Q1 563 aa8.58□□□□□ -1.04
CHD3-216ENST00000573936 HMX3A6NHT5 357 aa8.57□□□□□ -1.04
CHD3-216ENST00000573936 C15orf61A6NNL5 157 aa8.57□□□□□ -1.04
CHD3-216ENST00000573936 E7EUB6 86 aa8.57□□□□□ -1.04
CHD3-216ENST00000573936 I3L521 148 aa8.57□□□□□ -1.04
CHD3-216ENST00000573936 CCL24O00175 119 aa8.57□□□□□ -1.04
CHD3-216ENST00000573936 RBMXL2O75526 392 aaKnown RBP8.57□□□□□ -1.04
CHD3-216ENST00000573936 CRYGCP07315 174 aa8.57□□□□□ -1.04
CHD3-216ENST00000573936 APELAP0DMC3 54 aa8.57□□□□□ -1.04
CHD3-216ENST00000573936 HIST1H1BP16401 226 aaKnown RBP8.57□□□□□ -1.04
CHD3-216ENST00000573936 PSMB6P28072 239 aa8.57□□□□□ -1.04
CHD3-216ENST00000573936 UBE2MP61081 183 aaKnown RBP8.57□□□□□ -1.04
CHD3-216ENST00000573936 TMEM187Q14656 261 aa8.57□□□□□ -1.04
CHD3-216ENST00000573936 OXA1LQ15070 435 aa8.57□□□□□ -1.04
CHD3-216ENST00000573936 PLET1Q6UQ28 207 aa8.57□□□□□ -1.04
CHD3-216ENST00000573936 C18orf65Q6ZTR6 163 aa8.57□□□□□ -1.04
CHD3-216ENST00000573936 TMED4Q7Z7H5 227 aa8.57□□□□□ -1.04
CHD3-216ENST00000573936 CENPSQ8N2Z9 138 aa8.57□□□□□ -1.04
CHD3-216ENST00000573936 TMEM230Q96A57 120 aa8.57□□□□□ -1.04
CHD3-216ENST00000573936 NDUFA4L2Q9NRX3 87 aa8.57□□□□□ -1.04
CHD3-216ENST00000573936 TMEM14BQ9NUH8 114 aa8.57□□□□□ -1.04
CHD3-216ENST00000573936 NSG2Q9Y328 171 aa8.57□□□□□ -1.04
CHD3-216ENST00000573936 TMEM56-RWDD3S4R434 201 aa8.57□□□□□ -1.04
CHD3-216ENST00000573936 FAM223BA6NKX1 122 aa8.56□□□□□ -1.04
CHD3-216ENST00000573936 IGKV1-5P01602 117 aa8.56□□□□□ -1.04
CHD3-216ENST00000573936 LGALS1P09382 135 aaKnown RBP8.56□□□□□ -1.04
CHD3-216ENST00000573936 H2AFB2P0C5Z0 115 aa8.56□□□□□ -1.04
CHD3-216ENST00000573936 P0C879 139 aa8.56□□□□□ -1.04
CHD3-216ENST00000573936 DEFA4P12838 97 aa8.56□□□□□ -1.04
CHD3-216ENST00000573936 MYOD1P15172 320 aa8.56□□□□□ -1.04
CHD3-216ENST00000573936 CTRB1P17538 263 aa8.56□□□□□ -1.04
CHD3-216ENST00000573936 ANXA7P20073 488 aaKnown RBP8.56□□□□□ -1.04
CHD3-216ENST00000573936 CD33P20138 364 aa8.56□□□□□ -1.04
CHD3-216ENST00000573936 MECP2P51608 486 aaKnown RBP8.56□□□□□ -1.04
CHD3-216ENST00000573936 RAB25P57735 213 aa8.56□□□□□ -1.04
CHD3-216ENST00000573936 FAM209BQ5JX69 171 aa8.56□□□□□ -1.04
CHD3-216ENST00000573936 TMEM268Q5VZI3 342 aa8.56□□□□□ -1.04
CHD3-216ENST00000573936 CTRB2Q6GPI1 263 aa8.56□□□□□ -1.04
CHD3-216ENST00000573936 ZNF429Q86V71 674 aa8.56□□□□□ -1.04
CHD3-216ENST00000573936 FAM223AQ8IWN6 122 aa8.56□□□□□ -1.04
CHD3-216ENST00000573936 SELENOHQ8IZQ5 122 aaKnown RBP8.56□□□□□ -1.04
CHD3-216ENST00000573936 LGI3Q8N145 548 aa8.56□□□□□ -1.04
CHD3-216ENST00000573936 CASTOR1Q8WTX7 329 aa8.56□□□□□ -1.04
CHD3-216ENST00000573936 DPF1Q92782 380 aa8.56□□□□□ -1.04
CHD3-216ENST00000573936 LSM10Q969L4 123 aaKnown RBP8.56□□□□□ -1.04
CHD3-216ENST00000573936 MARVELD1Q9BSK0 173 aa8.56□□□□□ -1.04
CHD3-216ENST00000573936 PDCD10Q9BUL8 212 aa8.56□□□□□ -1.04
CHD3-216ENST00000573936 GNB4Q9HAV0 340 aa8.56□□□□□ -1.04
CHD3-216ENST00000573936 CACFD1Q9UGQ2 172 aa8.56□□□□□ -1.04
CHD3-216ENST00000573936 NOTCH3Q9UM47 2321 aa8.55□□□□□ -1.04
CHD3-216ENST00000573936 TRBV9A0A0B4J1U6 114 aa8.55□□□□□ -1.04
CHD3-216ENST00000573936 A0A1B0GW64 132 aa8.55□□□□□ -1.04
CHD3-216ENST00000573936 DUXBA0A1W2PPF3 345 aa8.55□□□□□ -1.04
CHD3-216ENST00000573936 CGB1A6NKQ9 187 aa8.55□□□□□ -1.04
CHD3-216ENST00000573936 INMT-MINDY4F8WBC2 141 aa8.55□□□□□ -1.04
CHD3-216ENST00000573936 HSPB1P04792 205 aaKnown RBP8.55□□□□□ -1.04
CHD3-216ENST00000573936 OR8U8P0C7N1 319 aa8.55□□□□□ -1.04
CHD3-216ENST00000573936 AREGP15514 252 aa8.55□□□□□ -1.04
CHD3-216ENST00000573936 HSPE1P61604 102 aaKnown RBP8.55□□□□□ -1.04
CHD3-216ENST00000573936 SUPT4H1P63272 117 aaKnown RBP8.55□□□□□ -1.04
CHD3-216ENST00000573936 ATP5G2Q06055 141 aa8.55□□□□□ -1.04
CHD3-216ENST00000573936 KLK9Q2XQG4 91 aa8.55□□□□□ -1.04
CHD3-216ENST00000573936 NECAP1Q8NC96 275 aa8.55□□□□□ -1.04
CHD3-216ENST00000573936 WFDC9Q8NEX5 89 aa8.55□□□□□ -1.04
CHD3-216ENST00000573936 OR11H1Q8NG94 326 aa8.55□□□□□ -1.04
CHD3-216ENST00000573936 OR1L6Q8NGR2 347 aa8.55□□□□□ -1.04
CHD3-216ENST00000573936 OR1N2Q8NGR9 330 aa8.55□□□□□ -1.04
CHD3-216ENST00000573936 RAX2Q96IS3 184 aa8.55□□□□□ -1.04
CHD3-216ENST00000573936 P2RX4Q99571 388 aa8.55□□□□□ -1.04
CHD3-216ENST00000573936 HINT2Q9BX68 163 aa8.55□□□□□ -1.04
CHD3-216ENST00000573936 THYN1Q9P016 225 aa8.55□□□□□ -1.04
CHD3-216ENST00000573936 KLK9Q9UKQ9 250 aa8.55□□□□□ -1.04
CHD3-216ENST00000573936 A0A0B4J293 547 aa8.54□□□□□ -1.04
CHD3-216ENST00000573936 A0A0B4J2A0 478 aa8.54□□□□□ -1.04
CHD3-216ENST00000573936 IGLC7A0M8Q6 106 aa8.54□□□□□ -1.04
CHD3-216ENST00000573936 LINC01619G3V211 115 aa8.54□□□□□ -1.04
CHD3-216ENST00000573936 SFT2D2O95562 160 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms