RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 TMEM230Q96A57 120 aa10.04□□□□□ -0.8
CNOT1-213ENST00000568158 RCC1LQ96I51 464 aaKnown RBP10.04□□□□□ -0.8
CNOT1-213ENST00000568158 FANCD2OSQ96PS1 177 aa10.04□□□□□ -0.8
CNOT1-213ENST00000568158 HINT2Q9BX68 163 aa10.04□□□□□ -0.8
CNOT1-213ENST00000568158 OR51B2Q9Y5P1 312 aa10.04□□□□□ -0.8
CNOT1-213ENST00000568158 IGLC7A0M8Q6 106 aa10.03□□□□□ -0.8
CNOT1-213ENST00000568158 CRYM-AS1A6NIL9 109 aa10.03□□□□□ -0.8
CNOT1-213ENST00000568158 NPIPB5A8MRT5 1133 aa10.03□□□□□ -0.8
CNOT1-213ENST00000568158 LINC01619G3V211 115 aa10.03□□□□□ -0.8
CNOT1-213ENST00000568158 NDUFB8O95169 186 aa10.03□□□□□ -0.8
CNOT1-213ENST00000568158 PRB2P02812 416 aaPredicted RBP10.03□□□□□ -0.8
CNOT1-213ENST00000568158 AKR1C4P17516 323 aa10.03□□□□□ -0.8
CNOT1-213ENST00000568158 UCP1P25874 307 aa10.03□□□□□ -0.8
CNOT1-213ENST00000568158 FAUP35544 74 aaKnown RBP10.03□□□□□ -0.8
CNOT1-213ENST00000568158 RHOGP84095 191 aa10.03□□□□□ -0.8
CNOT1-213ENST00000568158 ATP5G2Q06055 141 aa10.03□□□□□ -0.8
CNOT1-213ENST00000568158 LCE2AQ5TA79 106 aaPredicted RBP10.03□□□□□ -0.8
CNOT1-213ENST00000568158 LHFPL5Q8TAF8 219 aa10.03□□□□□ -0.8
CNOT1-213ENST00000568158 DLX4Q92988 240 aaPredicted RBP10.03□□□□□ -0.8
CNOT1-213ENST00000568158 USMG5Q96IX5 58 aa10.03□□□□□ -0.8
CNOT1-213ENST00000568158 SCGB3A2Q96PL1 93 aa10.03□□□□□ -0.8
CNOT1-213ENST00000568158 NAA60Q9H7X0 242 aa10.03□□□□□ -0.8
CNOT1-213ENST00000568158 NDUFA4L2Q9NRX3 87 aa10.03□□□□□ -0.8
CNOT1-213ENST00000568158 ZNF257Q9Y2Q1 563 aa10.03□□□□□ -0.8
CNOT1-213ENST00000568158 A0A0G2JRQ6 117 aa10.02□□□□□ -0.81
CNOT1-213ENST00000568158 CDS2O95674 445 aa10.02□□□□□ -0.81
CNOT1-213ENST00000568158 TRBV12-3P01733 135 aa10.02□□□□□ -0.81
CNOT1-213ENST00000568158 OR8U8P0C7N1 319 aa10.02□□□□□ -0.81
CNOT1-213ENST00000568158 OR13C7P0DN81 318 aa10.02□□□□□ -0.81
CNOT1-213ENST00000568158 INPP1P49441 399 aa10.02□□□□□ -0.81
CNOT1-213ENST00000568158 ZNF343Q6P1L6 599 aa10.02□□□□□ -0.81
CNOT1-213ENST00000568158 SGPP2Q8IWX5 399 aa10.02□□□□□ -0.81
CNOT1-213ENST00000568158 SELENOHQ8IZQ5 122 aaKnown RBP10.02□□□□□ -0.81
CNOT1-213ENST00000568158 OR4A16Q8NH70 328 aa10.02□□□□□ -0.81
CNOT1-213ENST00000568158 TSC22D3Q99576 134 aa10.02□□□□□ -0.81
CNOT1-213ENST00000568158 QTRT1Q9BXR0 403 aaKnown RBP10.02□□□□□ -0.81
CNOT1-213ENST00000568158 TMEM222Q9H0R3 208 aa10.02□□□□□ -0.81
CNOT1-213ENST00000568158 TMEM14BQ9NUH8 114 aa10.02□□□□□ -0.81
CNOT1-213ENST00000568158 FKBP11Q9NYL4 201 aa10.02□□□□□ -0.81
CNOT1-213ENST00000568158 PRR13Q9NZ81 148 aa10.02□□□□□ -0.81
CNOT1-213ENST00000568158 FBXL7Q9UJT9 491 aa10.02□□□□□ -0.81
CNOT1-213ENST00000568158 PRNDQ9UKY0 176 aa10.02□□□□□ -0.81
CNOT1-213ENST00000568158 S4R3C0 116 aa10.02□□□□□ -0.81
CNOT1-213ENST00000568158 A0A0B4J293 547 aa10.01□□□□□ -0.81
CNOT1-213ENST00000568158 C15orf61A6NNL5 157 aa10.01□□□□□ -0.81
CNOT1-213ENST00000568158 IGHV3-23P01764 117 aa10.01□□□□□ -0.81
CNOT1-213ENST00000568158 FGF2P09038 288 aa10.01□□□□□ -0.81
CNOT1-213ENST00000568158 P0C879 139 aa10.01□□□□□ -0.81
CNOT1-213ENST00000568158 DEFA4P12838 97 aa10.01□□□□□ -0.81
CNOT1-213ENST00000568158 HOXD3P31249 432 aaPredicted RBP10.01□□□□□ -0.81
CNOT1-213ENST00000568158 CCR6P51684 374 aa10.01□□□□□ -0.81
CNOT1-213ENST00000568158 DHODHQ02127 395 aa10.01□□□□□ -0.81
CNOT1-213ENST00000568158 WT1-ASQ06250 92 aa10.01□□□□□ -0.81
CNOT1-213ENST00000568158 TMEM187Q14656 261 aa10.01□□□□□ -0.81
CNOT1-213ENST00000568158 TRIQKQ629K1 86 aa10.01□□□□□ -0.81
CNOT1-213ENST00000568158 Q6ZRM9 215 aa10.01□□□□□ -0.81
CNOT1-213ENST00000568158 RANGRFQ9HD47 186 aaPredicted RBP10.01□□□□□ -0.81
CNOT1-213ENST00000568158 PEF1Q9UBV8 284 aaKnown RBP10.01□□□□□ -0.81
CNOT1-213ENST00000568158 KCNIP3Q9Y2W7 256 aa10.01□□□□□ -0.81
CNOT1-213ENST00000568158 FAM223BA6NKX1 122 aa10□□□□□ -0.81
CNOT1-213ENST00000568158 OVOL1O14753 267 aa10□□□□□ -0.81
CNOT1-213ENST00000568158 B3GALNT1O75752 331 aa10□□□□□ -0.81
CNOT1-213ENST00000568158 DUS4LO95620 317 aaKnown RBP10□□□□□ -0.81
CNOT1-213ENST00000568158 IL7P13232 177 aa10□□□□□ -0.81
CNOT1-213ENST00000568158 MECP2P51608 486 aaKnown RBP10□□□□□ -0.81
CNOT1-213ENST00000568158 AKR1C2P52895 323 aa10□□□□□ -0.81
CNOT1-213ENST00000568158 KRTAP10-11P60412 298 aa10□□□□□ -0.81
CNOT1-213ENST00000568158 HSPE1P61604 102 aaKnown RBP10□□□□□ -0.81
CNOT1-213ENST00000568158 SUPT4H1P63272 117 aaKnown RBP10□□□□□ -0.81
CNOT1-213ENST00000568158 KLK9Q2XQG4 91 aa10□□□□□ -0.81
CNOT1-213ENST00000568158 C15orf32Q32M92 178 aa10□□□□□ -0.81
CNOT1-213ENST00000568158 SPINK9Q5DT21 86 aa10□□□□□ -0.81
CNOT1-213ENST00000568158 KPRPQ5T749 579 aaPredicted RBP10□□□□□ -0.81
CNOT1-213ENST00000568158 TMEM268Q5VZI3 342 aa10□□□□□ -0.81
CNOT1-213ENST00000568158 SLC25A24Q6NUK1 477 aa10□□□□□ -0.81
CNOT1-213ENST00000568158 TMED4Q7Z7H5 227 aa10□□□□□ -0.81
CNOT1-213ENST00000568158 FAM223AQ8IWN6 122 aa10□□□□□ -0.81
CNOT1-213ENST00000568158 NECAP1Q8NC96 275 aa10□□□□□ -0.81
CNOT1-213ENST00000568158 OR5B3Q8NH48 314 aa10□□□□□ -0.81
CNOT1-213ENST00000568158 GPR146Q96CH1 333 aa10□□□□□ -0.81
CNOT1-213ENST00000568158 RRNAD1Q96FB5 475 aaKnown RBP10□□□□□ -0.81
CNOT1-213ENST00000568158 SRSF8Q9BRL6 282 aaKnown RBP10□□□□□ -0.81
CNOT1-213ENST00000568158 MCRIP2Q9BUT9 160 aaKnown RBP10□□□□□ -0.81
CNOT1-213ENST00000568158 KLK9Q9UKQ9 250 aa10□□□□□ -0.81
CNOT1-213ENST00000568158 DMRT1Q9Y5R6 373 aa10□□□□□ -0.81
CNOT1-213ENST00000568158 IGLV11-55A0A075B6I3 123 aa9.99□□□□□ -0.81
CNOT1-213ENST00000568158 SEC14L6B5MCN3 397 aa9.99□□□□□ -0.81
CNOT1-213ENST00000568158 ATG12O94817 140 aa9.99□□□□□ -0.81
CNOT1-213ENST00000568158 DHFRP00374 187 aa9.99□□□□□ -0.81
CNOT1-213ENST00000568158 HIST1H1BP16401 226 aaKnown RBP9.99□□□□□ -0.81
CNOT1-213ENST00000568158 MFAP2P55001 183 aa9.99□□□□□ -0.81
CNOT1-213ENST00000568158 EXOSC2Q13868 293 aaKnown RBP9.99□□□□□ -0.81
CNOT1-213ENST00000568158 RNASE11Q8TAA1 199 aaKnown RBP9.99□□□□□ -0.81
CNOT1-213ENST00000568158 DEDD2Q8WXF8 326 aa9.99□□□□□ -0.81
CNOT1-213ENST00000568158 RBPMSQ93062 196 aaKnown RBP9.99□□□□□ -0.81
CNOT1-213ENST00000568158 LSM10Q969L4 123 aaKnown RBP9.99□□□□□ -0.81
CNOT1-213ENST00000568158 GALNT14Q96FL9 552 aa9.99□□□□□ -0.81
CNOT1-213ENST00000568158 TMEM56Q96MV1 263 aa9.99□□□□□ -0.81
CNOT1-213ENST00000568158 SLC25A21Q9BQT8 299 aaPredicted RBP9.99□□□□□ -0.81
CNOT1-213ENST00000568158 BATF3Q9NR55 127 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms