RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 AREGP15514 252 aa12.75□□□□□ -0.37
CDT1-202ENST00000562747 CTRB1P17538 263 aa12.75□□□□□ -0.37
CDT1-202ENST00000562747 FAUP35544 74 aaKnown RBP12.75□□□□□ -0.37
CDT1-202ENST00000562747 RHOGP84095 191 aa12.75□□□□□ -0.37
CDT1-202ENST00000562747 KLK9Q2XQG4 91 aa12.75□□□□□ -0.37
CDT1-202ENST00000562747 CTRB2Q6GPI1 263 aa12.75□□□□□ -0.37
CDT1-202ENST00000562747 H2BFWTQ7Z2G1 175 aa12.75□□□□□ -0.37
CDT1-202ENST00000562747 HSD17B13Q7Z5P4 300 aaPredicted RBP12.75□□□□□ -0.37
CDT1-202ENST00000562747 GDPD1Q8N9F7 314 aa12.75□□□□□ -0.37
CDT1-202ENST00000562747 NECAP1Q8NC96 275 aa12.75□□□□□ -0.37
CDT1-202ENST00000562747 OR6Q1Q8NGQ2 317 aa12.75□□□□□ -0.37
CDT1-202ENST00000562747 OR1L8Q8NGR8 309 aa12.75□□□□□ -0.37
CDT1-202ENST00000562747 DEDD2Q8WXF8 326 aa12.75□□□□□ -0.37
CDT1-202ENST00000562747 DCUN1D4Q92564 292 aa12.75□□□□□ -0.37
CDT1-202ENST00000562747 TP53RKQ96S44 253 aa12.75□□□□□ -0.37
CDT1-202ENST00000562747 RTBDNQ9BSG5 229 aaPredicted RBP12.75□□□□□ -0.37
CDT1-202ENST00000562747 AKIP1Q9NQ31 210 aa12.75□□□□□ -0.37
CDT1-202ENST00000562747 FKBP11Q9NYL4 201 aa12.75□□□□□ -0.37
CDT1-202ENST00000562747 KLK9Q9UKQ9 250 aa12.75□□□□□ -0.37
CDT1-202ENST00000562747 PRNDQ9UKY0 176 aa12.75□□□□□ -0.37
CDT1-202ENST00000562747 GPR132Q9UNW8 380 aa12.75□□□□□ -0.37
CDT1-202ENST00000562747 TEX50A0A1B0GTY4 177 aa12.74□□□□□ -0.37
CDT1-202ENST00000562747 IGLC7A0M8Q6 106 aa12.74□□□□□ -0.37
CDT1-202ENST00000562747 OVOL1O14753 267 aa12.74□□□□□ -0.37
CDT1-202ENST00000562747 TRAPPC2P0DI81 140 aa12.74□□□□□ -0.37
CDT1-202ENST00000562747 TRAPPC2BP0DI82 140 aa12.74□□□□□ -0.37
CDT1-202ENST00000562747 HIST1H1BP16401 226 aaKnown RBP12.74□□□□□ -0.37
CDT1-202ENST00000562747 ZP3P21754 424 aa12.74□□□□□ -0.37
CDT1-202ENST00000562747 SLURP1P55000 103 aa12.74□□□□□ -0.37
CDT1-202ENST00000562747 DEFA5Q01523 94 aa12.74□□□□□ -0.37
CDT1-202ENST00000562747 ATP5G2Q06055 141 aa12.74□□□□□ -0.37
CDT1-202ENST00000562747 KLF9Q13886 244 aaPredicted RBP12.74□□□□□ -0.37
CDT1-202ENST00000562747 FAM209BQ5JX69 171 aa12.74□□□□□ -0.37
CDT1-202ENST00000562747 TOMM5Q8N4H5 51 aa12.74□□□□□ -0.37
CDT1-202ENST00000562747 OR5B3Q8NH48 314 aa12.74□□□□□ -0.37
CDT1-202ENST00000562747 DLX4Q92988 240 aaPredicted RBP12.74□□□□□ -0.37
CDT1-202ENST00000562747 SCGB3A2Q96PL1 93 aa12.74□□□□□ -0.37
CDT1-202ENST00000562747 C5orf66Q9H5L9 145 aa12.74□□□□□ -0.37
CDT1-202ENST00000562747 MCUBQ9NWR8 336 aa12.74□□□□□ -0.37
CDT1-202ENST00000562747 ZMAT5Q9UDW3 170 aaKnown RBP12.74□□□□□ -0.37
CDT1-202ENST00000562747 OR51B2Q9Y5P1 312 aa12.74□□□□□ -0.37
CDT1-202ENST00000562747 C15orf61A6NNL5 157 aa12.73□□□□□ -0.37
CDT1-202ENST00000562747 SEC14L6B5MCN3 397 aa12.73□□□□□ -0.37
CDT1-202ENST00000562747 ATG12O94817 140 aa12.73□□□□□ -0.37
CDT1-202ENST00000562747 UCP1P25874 307 aa12.73□□□□□ -0.37
CDT1-202ENST00000562747 FANCD2OSQ96PS1 177 aa12.73□□□□□ -0.37
CDT1-202ENST00000562747 SRRQ9GZT4 340 aa12.73□□□□□ -0.37
CDT1-202ENST00000562747 NDUFA4L2Q9NRX3 87 aa12.73□□□□□ -0.37
CDT1-202ENST00000562747 TMEM14BQ9NUH8 114 aa12.73□□□□□ -0.37
CDT1-202ENST00000562747 PEF1Q9UBV8 284 aaKnown RBP12.73□□□□□ -0.37
CDT1-202ENST00000562747 NSG2Q9Y328 171 aa12.73□□□□□ -0.37
CDT1-202ENST00000562747 ANKRD34BA5PLL1 514 aa12.72□□□□□ -0.37
CDT1-202ENST00000562747 OR2J3O76001 311 aa12.72□□□□□ -0.37
CDT1-202ENST00000562747 DEFA4P12838 97 aa12.72□□□□□ -0.37
CDT1-202ENST00000562747 INSL3P51460 131 aa12.72□□□□□ -0.37
CDT1-202ENST00000562747 EXOSC2Q13868 293 aaKnown RBP12.72□□□□□ -0.37
CDT1-202ENST00000562747 TRIM16LQ309B1 348 aa12.72□□□□□ -0.37
CDT1-202ENST00000562747 C15orf32Q32M92 178 aa12.72□□□□□ -0.37
CDT1-202ENST00000562747 OR4A16Q8NH70 328 aa12.72□□□□□ -0.37
CDT1-202ENST00000562747 LSM10Q969L4 123 aaKnown RBP12.72□□□□□ -0.37
CDT1-202ENST00000562747 NAA60Q9H7X0 242 aa12.72□□□□□ -0.37
CDT1-202ENST00000562747 FBXL7Q9UJT9 491 aa12.72□□□□□ -0.37
CDT1-202ENST00000562747 TEX13DA0A0J9YY54 714 aaPredicted RBP12.71□□□□□ -0.37
CDT1-202ENST00000562747 CRYM-AS1A6NIL9 109 aa12.71□□□□□ -0.37
CDT1-202ENST00000562747 REG1AP05451 166 aa12.71□□□□□ -0.37
CDT1-202ENST00000562747 AKR1C2P52895 323 aa12.71□□□□□ -0.37
CDT1-202ENST00000562747 SP6Q3SY56 376 aa12.71□□□□□ -0.37
CDT1-202ENST00000562747 C19orf35Q6ZS72 473 aa12.71□□□□□ -0.37
CDT1-202ENST00000562747 OR10W1Q8NGF6 305 aa12.71□□□□□ -0.37
CDT1-202ENST00000562747 TMEM56Q96MV1 263 aa12.71□□□□□ -0.37
CDT1-202ENST00000562747 TMEM222Q9H0R3 208 aa12.71□□□□□ -0.37
CDT1-202ENST00000562747 DYNC2H1Q8NCM8 4307 aaKnown RBP12.7□□□□□ -0.38
CDT1-202ENST00000562747 IGLV11-55A0A075B6I3 123 aa12.7□□□□□ -0.38
CDT1-202ENST00000562747 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.7□□□□□ -0.38
CDT1-202ENST00000562747 DBX1A6NMT0 343 aa12.7□□□□□ -0.38
CDT1-202ENST00000562747 CYB5BO43169 146 aa12.7□□□□□ -0.38
CDT1-202ENST00000562747 CDS2O95674 445 aa12.7□□□□□ -0.38
CDT1-202ENST00000562747 IGKV1-5P01602 117 aa12.7□□□□□ -0.38
CDT1-202ENST00000562747 OR5AC1P0C628 307 aa12.7□□□□□ -0.38
CDT1-202ENST00000562747 P0C879 139 aa12.7□□□□□ -0.38
CDT1-202ENST00000562747 DHODHQ02127 395 aa12.7□□□□□ -0.38
CDT1-202ENST00000562747 WT1-ASQ06250 92 aa12.7□□□□□ -0.38
CDT1-202ENST00000562747 ACSM6Q6P461 480 aa12.7□□□□□ -0.38
CDT1-202ENST00000562747 ZNF429Q86V71 674 aa12.7□□□□□ -0.38
CDT1-202ENST00000562747 HINT2Q9BX68 163 aa12.7□□□□□ -0.38
CDT1-202ENST00000562747 THYN1Q9P016 225 aa12.7□□□□□ -0.38
CDT1-202ENST00000562747 RYR2Q92736 4967 aa12.69□□□□□ -0.38
CDT1-202ENST00000562747 NDUFB8O95169 186 aa12.69□□□□□ -0.38
CDT1-202ENST00000562747 TRBV12-3P01733 135 aa12.69□□□□□ -0.38
CDT1-202ENST00000562747 OR13C7P0DN81 318 aa12.69□□□□□ -0.38
CDT1-202ENST00000562747 KLF5Q13887 457 aaPredicted RBP12.69□□□□□ -0.38
CDT1-202ENST00000562747 SGPP2Q8IWX5 399 aa12.69□□□□□ -0.38
CDT1-202ENST00000562747 GLYATL2Q8WU03 294 aa12.69□□□□□ -0.38
CDT1-202ENST00000562747 RRNAD1Q96FB5 475 aaKnown RBP12.69□□□□□ -0.38
CDT1-202ENST00000562747 GALNT14Q96FL9 552 aa12.69□□□□□ -0.38
CDT1-202ENST00000562747 HSPE1P61604 102 aaKnown RBP12.68□□□□□ -0.38
CDT1-202ENST00000562747 PRCDQ00LT1 54 aa12.68□□□□□ -0.38
CDT1-202ENST00000562747 TATDN3Q17R31 274 aa12.68□□□□□ -0.38
CDT1-202ENST00000562747 RPEL1Q2QD12 228 aa12.68□□□□□ -0.38
CDT1-202ENST00000562747 TRIQKQ629K1 86 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms