RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 TGP01266 2768 aa11.98□□□□□ -0.49
RABGGTA-219ENST00000560871 A0A0G2JRQ6 117 aa11.97□□□□□ -0.49
RABGGTA-219ENST00000560871 TEX13DA0A0J9YY54 714 aaPredicted RBP11.97□□□□□ -0.49
RABGGTA-219ENST00000560871 CDS2O95674 445 aa11.97□□□□□ -0.49
RABGGTA-219ENST00000560871 IGHV3-11P01762 117 aa11.97□□□□□ -0.49
RABGGTA-219ENST00000560871 PRB2P02812 416 aaPredicted RBP11.97□□□□□ -0.49
RABGGTA-219ENST00000560871 IGLL1P15814 213 aa11.97□□□□□ -0.49
RABGGTA-219ENST00000560871 PSMB6P28072 239 aa11.97□□□□□ -0.49
RABGGTA-219ENST00000560871 BTCP35070 178 aa11.97□□□□□ -0.49
RABGGTA-219ENST00000560871 SUPT4H1P63272 117 aaKnown RBP11.97□□□□□ -0.49
RABGGTA-219ENST00000560871 TRIM16LQ309B1 348 aa11.97□□□□□ -0.49
RABGGTA-219ENST00000560871 H2BFWTQ7Z2G1 175 aa11.97□□□□□ -0.49
RABGGTA-219ENST00000560871 REC114Q7Z4M0 266 aa11.97□□□□□ -0.49
RABGGTA-219ENST00000560871 OR1L8Q8NGR8 309 aa11.97□□□□□ -0.49
RABGGTA-219ENST00000560871 NDUFA4L2Q9NRX3 87 aa11.97□□□□□ -0.49
RABGGTA-219ENST00000560871 PRNDQ9UKY0 176 aa11.97□□□□□ -0.49
RABGGTA-219ENST00000560871 IGHV4OR15-8A0A075B7B6 117 aa11.96□□□□□ -0.49
RABGGTA-219ENST00000560871 A0A087WW49 117 aa11.96□□□□□ -0.49
RABGGTA-219ENST00000560871 A0A0G2JLM5 398 aa11.96□□□□□ -0.49
RABGGTA-219ENST00000560871 NAP1L6A6NFF2 107 aa11.96□□□□□ -0.49
RABGGTA-219ENST00000560871 FAM223BA6NKX1 122 aa11.96□□□□□ -0.49
RABGGTA-219ENST00000560871 SNAPC5O75971 98 aa11.96□□□□□ -0.49
RABGGTA-219ENST00000560871 REG1AP05451 166 aa11.96□□□□□ -0.49
RABGGTA-219ENST00000560871 AKR1C2P52895 323 aa11.96□□□□□ -0.49
RABGGTA-219ENST00000560871 DHODHQ02127 395 aa11.96□□□□□ -0.49
RABGGTA-219ENST00000560871 ZNF616Q08AN1 781 aa11.96□□□□□ -0.49
RABGGTA-219ENST00000560871 TMEM187Q14656 261 aa11.96□□□□□ -0.49
RABGGTA-219ENST00000560871 IZUMO4Q1ZYL8 232 aa11.96□□□□□ -0.49
RABGGTA-219ENST00000560871 FAM223AQ8IWN6 122 aa11.96□□□□□ -0.49
RABGGTA-219ENST00000560871 SGPP2Q8IWX5 399 aa11.96□□□□□ -0.49
RABGGTA-219ENST00000560871 OR10W1Q8NGF6 305 aa11.96□□□□□ -0.49
RABGGTA-219ENST00000560871 OR5B3Q8NH48 314 aa11.96□□□□□ -0.49
RABGGTA-219ENST00000560871 USMG5Q96IX5 58 aa11.96□□□□□ -0.49
RABGGTA-219ENST00000560871 FANCD2OSQ96PS1 177 aa11.96□□□□□ -0.49
RABGGTA-219ENST00000560871 SLC25A21Q9BQT8 299 aaPredicted RBP11.96□□□□□ -0.49
RABGGTA-219ENST00000560871 OR51B2Q9Y5P1 312 aa11.96□□□□□ -0.49
RABGGTA-219ENST00000560871 IGLV11-55A0A075B6I3 123 aa11.95□□□□□ -0.5
RABGGTA-219ENST00000560871 TRAPPC2P0DI81 140 aa11.95□□□□□ -0.5
RABGGTA-219ENST00000560871 TRAPPC2BP0DI82 140 aa11.95□□□□□ -0.5
RABGGTA-219ENST00000560871 INPP1P49441 399 aa11.95□□□□□ -0.5
RABGGTA-219ENST00000560871 CCR6P51684 374 aa11.95□□□□□ -0.5
RABGGTA-219ENST00000560871 RHOGP84095 191 aa11.95□□□□□ -0.5
RABGGTA-219ENST00000560871 WT1-ASQ06250 92 aa11.95□□□□□ -0.5
RABGGTA-219ENST00000560871 RBMS2Q15434 407 aaKnown RBP11.95□□□□□ -0.5
RABGGTA-219ENST00000560871 ZNF343Q6P1L6 599 aa11.95□□□□□ -0.5
RABGGTA-219ENST00000560871 ZNF429Q86V71 674 aa11.95□□□□□ -0.5
RABGGTA-219ENST00000560871 OR1N2Q8NGR9 330 aa11.95□□□□□ -0.5
RABGGTA-219ENST00000560871 RBPMSQ93062 196 aaKnown RBP11.95□□□□□ -0.5
RABGGTA-219ENST00000560871 LSM10Q969L4 123 aaKnown RBP11.95□□□□□ -0.5
RABGGTA-219ENST00000560871 RCC1LQ96I51 464 aaKnown RBP11.95□□□□□ -0.5
RABGGTA-219ENST00000560871 TMEM56Q96MV1 263 aa11.95□□□□□ -0.5
RABGGTA-219ENST00000560871 C7orf50Q9BRJ6 194 aaKnown RBP11.95□□□□□ -0.5
RABGGTA-219ENST00000560871 CCDC32Q9BV29 185 aa11.95□□□□□ -0.5
RABGGTA-219ENST00000560871 FKBP11Q9NYL4 201 aa11.95□□□□□ -0.5
RABGGTA-219ENST00000560871 TMEM56-RWDD3S4R434 201 aa11.95□□□□□ -0.5
RABGGTA-219ENST00000560871 PRKDCP78527 4128 aaKnown RBP11.95□□□□□ -0.5
RABGGTA-219ENST00000560871 A0A0B4J293 547 aa11.94□□□□□ -0.5
RABGGTA-219ENST00000560871 C13orf42A0A1B0GVH6 325 aa11.94□□□□□ -0.5
RABGGTA-219ENST00000560871 OR2J3O76001 311 aa11.94□□□□□ -0.5
RABGGTA-219ENST00000560871 ATG12O94817 140 aa11.94□□□□□ -0.5
RABGGTA-219ENST00000560871 OR8U8P0C7N1 319 aa11.94□□□□□ -0.5
RABGGTA-219ENST00000560871 HSD17B13Q7Z5P4 300 aaPredicted RBP11.94□□□□□ -0.5
RABGGTA-219ENST00000560871 SELENOHQ8IZQ5 122 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-219ENST00000560871 NECAP1Q8NC96 275 aa11.94□□□□□ -0.5
RABGGTA-219ENST00000560871 OR4A16Q8NH70 328 aa11.94□□□□□ -0.5
RABGGTA-219ENST00000560871 IL22RA2Q969J5 263 aa11.94□□□□□ -0.5
RABGGTA-219ENST00000560871 PRR13Q9NZ81 148 aa11.94□□□□□ -0.5
RABGGTA-219ENST00000560871 DMRT1Q9Y5R6 373 aa11.94□□□□□ -0.5
RABGGTA-219ENST00000560871 LINC00854A0A1B0GVQ3 168 aa11.93□□□□□ -0.5
RABGGTA-219ENST00000560871 LINC01619G3V211 115 aa11.93□□□□□ -0.5
RABGGTA-219ENST00000560871 PLA2G10O15496 165 aa11.93□□□□□ -0.5
RABGGTA-219ENST00000560871 DUS4LO95620 317 aaKnown RBP11.93□□□□□ -0.5
RABGGTA-219ENST00000560871 HSPB1P04792 205 aaKnown RBP11.93□□□□□ -0.5
RABGGTA-219ENST00000560871 AKR1C4P17516 323 aa11.93□□□□□ -0.5
RABGGTA-219ENST00000560871 RAB25P57735 213 aa11.93□□□□□ -0.5
RABGGTA-219ENST00000560871 PRCDQ00LT1 54 aa11.93□□□□□ -0.5
RABGGTA-219ENST00000560871 TMEM128Q5BJH2 165 aa11.93□□□□□ -0.5
RABGGTA-219ENST00000560871 TMEM268Q5VZI3 342 aa11.93□□□□□ -0.5
RABGGTA-219ENST00000560871 Q6ZRM9 215 aa11.93□□□□□ -0.5
RABGGTA-219ENST00000560871 TMED4Q7Z7H5 227 aa11.93□□□□□ -0.5
RABGGTA-219ENST00000560871 FAM219AQ8IW50 185 aa11.93□□□□□ -0.5
RABGGTA-219ENST00000560871 S100ZQ8WXG8 99 aa11.93□□□□□ -0.5
RABGGTA-219ENST00000560871 AURKAIP1Q9NWT8 199 aaPredicted RBP11.93□□□□□ -0.5
RABGGTA-219ENST00000560871 KCNIP3Q9Y2W7 256 aa11.93□□□□□ -0.5
RABGGTA-219ENST00000560871 NDUFB6O95139 128 aa11.92□□□□□ -0.5
RABGGTA-219ENST00000560871 DHFRP00374 187 aa11.92□□□□□ -0.5
RABGGTA-219ENST00000560871 TRBV12-3P01733 135 aa11.92□□□□□ -0.5
RABGGTA-219ENST00000560871 OR13C7P0DN81 318 aa11.92□□□□□ -0.5
RABGGTA-219ENST00000560871 SLURP1P55000 103 aa11.92□□□□□ -0.5
RABGGTA-219ENST00000560871 HSPE1P61604 102 aaKnown RBP11.92□□□□□ -0.5
RABGGTA-219ENST00000560871 EXOSC2Q13868 293 aaKnown RBP11.92□□□□□ -0.5
RABGGTA-219ENST00000560871 C15orf32Q32M92 178 aa11.92□□□□□ -0.5
RABGGTA-219ENST00000560871 AARDQ4LEZ3 155 aa11.92□□□□□ -0.5
RABGGTA-219ENST00000560871 CENPSQ8N2Z9 138 aa11.92□□□□□ -0.5
RABGGTA-219ENST00000560871 SLC35G3Q8N808 338 aa11.92□□□□□ -0.5
RABGGTA-219ENST00000560871 RRNAD1Q96FB5 475 aaKnown RBP11.92□□□□□ -0.5
RABGGTA-219ENST00000560871 HINT2Q9BX68 163 aa11.92□□□□□ -0.5
RABGGTA-219ENST00000560871 CENPXA8MT69 81 aa11.91□□□□□ -0.5
RABGGTA-219ENST00000560871 ST8SIA3O43173 380 aa11.91□□□□□ -0.5
RABGGTA-219ENST00000560871 NDUFB8O95169 186 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms