RNA–Protein interactions for RNA: ENST00000560427.1

NEDD8-208, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-208ENST00000560427 WFDC9Q8NEX5 89 aa10.1□□□□□ -0.79
NEDD8-208ENST00000560427 MS4A10Q96PG2 267 aa10.1□□□□□ -0.79
NEDD8-208ENST00000560427 P2RX4Q99571 388 aa10.1□□□□□ -0.79
NEDD8-208ENST00000560427 GNB4Q9HAV0 340 aa10.1□□□□□ -0.79
NEDD8-208ENST00000560427 NDUFA4L2Q9NRX3 87 aa10.1□□□□□ -0.79
NEDD8-208ENST00000560427 CACFD1Q9UGQ2 172 aa10.1□□□□□ -0.79
NEDD8-208ENST00000560427 KLK9Q9UKQ9 250 aa10.1□□□□□ -0.79
NEDD8-208ENST00000560427 OR51B2Q9Y5P1 312 aa10.1□□□□□ -0.79
NEDD8-208ENST00000560427 TNCP24821 2201 aa10.1□□□□□ -0.79
NEDD8-208ENST00000560427 WNK1Q9H4A3 2382 aa10.09□□□□□ -0.79
NEDD8-208ENST00000560427 TRBV9A0A0B4J1U6 114 aa10.09□□□□□ -0.79
NEDD8-208ENST00000560427 TEX50A0A1B0GTY4 177 aa10.09□□□□□ -0.79
NEDD8-208ENST00000560427 C13orf42A0A1B0GVH6 325 aa10.09□□□□□ -0.79
NEDD8-208ENST00000560427 A0A1B0GW64 132 aa10.09□□□□□ -0.79
NEDD8-208ENST00000560427 IGLC7A0M8Q6 106 aa10.09□□□□□ -0.79
NEDD8-208ENST00000560427 HMX3A6NHT5 357 aa10.09□□□□□ -0.79
NEDD8-208ENST00000560427 CGB1A6NKQ9 187 aa10.09□□□□□ -0.79
NEDD8-208ENST00000560427 CCL24O00175 119 aa10.09□□□□□ -0.79
NEDD8-208ENST00000560427 CYB5BO43169 146 aa10.09□□□□□ -0.79
NEDD8-208ENST00000560427 DUS4LO95620 317 aaKnown RBP10.09□□□□□ -0.79
NEDD8-208ENST00000560427 OR8U8P0C7N1 319 aa10.09□□□□□ -0.79
NEDD8-208ENST00000560427 APELAP0DMC3 54 aa10.09□□□□□ -0.79
NEDD8-208ENST00000560427 AKR1C4P17516 323 aa10.09□□□□□ -0.79
NEDD8-208ENST00000560427 CTRB1P17538 263 aa10.09□□□□□ -0.79
NEDD8-208ENST00000560427 CTRB2Q6GPI1 263 aa10.09□□□□□ -0.79
NEDD8-208ENST00000560427 LINC00482Q8N8I6 264 aa10.09□□□□□ -0.79
NEDD8-208ENST00000560427 NECAP1Q8NC96 275 aa10.09□□□□□ -0.79
NEDD8-208ENST00000560427 RNASE11Q8TAA1 199 aaKnown RBP10.09□□□□□ -0.79
NEDD8-208ENST00000560427 RAX2Q96IS3 184 aa10.09□□□□□ -0.79
NEDD8-208ENST00000560427 FBN3Q75N90 2809 aa10.08□□□□□ -0.8
NEDD8-208ENST00000560427 DUXBA0A1W2PPF3 345 aa10.08□□□□□ -0.8
NEDD8-208ENST00000560427 LYRM1O43325 122 aa10.08□□□□□ -0.8
NEDD8-208ENST00000560427 MYOD1P15172 320 aa10.08□□□□□ -0.8
NEDD8-208ENST00000560427 AREGP15514 252 aa10.08□□□□□ -0.8
NEDD8-208ENST00000560427 BTCP35070 178 aa10.08□□□□□ -0.8
NEDD8-208ENST00000560427 SUPT4H1P63272 117 aaKnown RBP10.08□□□□□ -0.8
NEDD8-208ENST00000560427 RHOGP84095 191 aa10.08□□□□□ -0.8
NEDD8-208ENST00000560427 PRCDQ00LT1 54 aa10.08□□□□□ -0.8
NEDD8-208ENST00000560427 ZNF616Q08AN1 781 aa10.08□□□□□ -0.8
NEDD8-208ENST00000560427 TMEM187Q14656 261 aa10.08□□□□□ -0.8
NEDD8-208ENST00000560427 AARDQ4LEZ3 155 aa10.08□□□□□ -0.8
NEDD8-208ENST00000560427 TMEM268Q5VZI3 342 aa10.08□□□□□ -0.8
NEDD8-208ENST00000560427 SELENOHQ8IZQ5 122 aaKnown RBP10.08□□□□□ -0.8
NEDD8-208ENST00000560427 LGI3Q8N145 548 aa10.08□□□□□ -0.8
NEDD8-208ENST00000560427 OR1L6Q8NGR2 347 aa10.08□□□□□ -0.8
NEDD8-208ENST00000560427 CASTOR1Q8WTX7 329 aa10.08□□□□□ -0.8
NEDD8-208ENST00000560427 RCC1LQ96I51 464 aaKnown RBP10.08□□□□□ -0.8
NEDD8-208ENST00000560427 PDCD10Q9BUL8 212 aa10.08□□□□□ -0.8
NEDD8-208ENST00000560427 GPR61Q9BZJ8 451 aa10.08□□□□□ -0.8
NEDD8-208ENST00000560427 THYN1Q9P016 225 aa10.08□□□□□ -0.8
NEDD8-208ENST00000560427 NSG2Q9Y328 171 aa10.08□□□□□ -0.8
NEDD8-208ENST00000560427 A0A0B4J2A0 478 aa10.07□□□□□ -0.8
NEDD8-208ENST00000560427 INS-IGF2F8WCM5 200 aa10.07□□□□□ -0.8
NEDD8-208ENST00000560427 RBMXL2O75526 392 aaKnown RBP10.07□□□□□ -0.8
NEDD8-208ENST00000560427 DEFA4P12838 97 aa10.07□□□□□ -0.8
NEDD8-208ENST00000560427 CD33P20138 364 aa10.07□□□□□ -0.8
NEDD8-208ENST00000560427 VAMP1P23763 118 aa10.07□□□□□ -0.8
NEDD8-208ENST00000560427 CCR6P51684 374 aa10.07□□□□□ -0.8
NEDD8-208ENST00000560427 HSPE1P61604 102 aaKnown RBP10.07□□□□□ -0.8
NEDD8-208ENST00000560427 DEFB136Q30KP8 78 aa10.07□□□□□ -0.8
NEDD8-208ENST00000560427 LRTM2Q8N967 370 aa10.07□□□□□ -0.8
NEDD8-208ENST00000560427 OR11H1Q8NG94 326 aa10.07□□□□□ -0.8
NEDD8-208ENST00000560427 OR1N2Q8NGR9 330 aa10.07□□□□□ -0.8
NEDD8-208ENST00000560427 LHFPL5Q8TAF8 219 aa10.07□□□□□ -0.8
NEDD8-208ENST00000560427 MCRIP2Q9BUT9 160 aaKnown RBP10.07□□□□□ -0.8
NEDD8-208ENST00000560427 SHPKQ9UHJ6 478 aa10.07□□□□□ -0.8
NEDD8-208ENST00000560427 IGLV11-55A0A075B6I3 123 aa10.06□□□□□ -0.8
NEDD8-208ENST00000560427 A0A0B4J293 547 aa10.06□□□□□ -0.8
NEDD8-208ENST00000560427 LINC00854A0A1B0GVQ3 168 aa10.06□□□□□ -0.8
NEDD8-208ENST00000560427 DBX1A6NMT0 343 aa10.06□□□□□ -0.8
NEDD8-208ENST00000560427 LINC01619G3V211 115 aa10.06□□□□□ -0.8
NEDD8-208ENST00000560427 PLA2G10O15496 165 aa10.06□□□□□ -0.8
NEDD8-208ENST00000560427 UPK1BO75841 260 aa10.06□□□□□ -0.8
NEDD8-208ENST00000560427 SFT2D2O95562 160 aa10.06□□□□□ -0.8
NEDD8-208ENST00000560427 HSPB1P04792 205 aaKnown RBP10.06□□□□□ -0.8
NEDD8-208ENST00000560427 OR13C7P0DN81 318 aa10.06□□□□□ -0.8
NEDD8-208ENST00000560427 RAB25P57735 213 aa10.06□□□□□ -0.8
NEDD8-208ENST00000560427 WT1-ASQ06250 92 aa10.06□□□□□ -0.8
NEDD8-208ENST00000560427 ZNF343Q6P1L6 599 aa10.06□□□□□ -0.8
NEDD8-208ENST00000560427 SLC35G3Q8N808 338 aa10.06□□□□□ -0.8
NEDD8-208ENST00000560427 OR52E5Q8NH55 327 aa10.06□□□□□ -0.8
NEDD8-208ENST00000560427 DPF1Q92782 380 aa10.06□□□□□ -0.8
NEDD8-208ENST00000560427 FANCD2OSQ96PS1 177 aa10.06□□□□□ -0.8
NEDD8-208ENST00000560427 OR5B12Q96R08 314 aa10.06□□□□□ -0.8
NEDD8-208ENST00000560427 HINT2Q9BX68 163 aa10.06□□□□□ -0.8
NEDD8-208ENST00000560427 PLEKHA3Q9HB20 300 aa10.06□□□□□ -0.8
NEDD8-208ENST00000560427 RANGRFQ9HD47 186 aaPredicted RBP10.06□□□□□ -0.8
NEDD8-208ENST00000560427 A0A0G2JRQ6 117 aa10.05□□□□□ -0.8
NEDD8-208ENST00000560427 IGHV3-11P01762 117 aa10.05□□□□□ -0.8
NEDD8-208ENST00000560427 ZP3P21754 424 aa10.05□□□□□ -0.8
NEDD8-208ENST00000560427 MECP2P51608 486 aaKnown RBP10.05□□□□□ -0.8
NEDD8-208ENST00000560427 ATP5G2Q06055 141 aa10.05□□□□□ -0.8
NEDD8-208ENST00000560427 ASAH1Q13510 395 aa10.05□□□□□ -0.8
NEDD8-208ENST00000560427 PPP1R1AQ13522 171 aa10.05□□□□□ -0.8
NEDD8-208ENST00000560427 C15orf32Q32M92 178 aa10.05□□□□□ -0.8
NEDD8-208ENST00000560427 PDLIM3Q53GG5 364 aaPredicted RBP10.05□□□□□ -0.8
NEDD8-208ENST00000560427 MZT2BQ6NZ67 158 aa10.05□□□□□ -0.8
NEDD8-208ENST00000560427 ZNF114Q8NC26 417 aa10.05□□□□□ -0.8
NEDD8-208ENST00000560427 OR10W1Q8NGF6 305 aa10.05□□□□□ -0.8
NEDD8-208ENST00000560427 OR1P1Q8NH06 330 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms