RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 ATG12O94817 140 aa15.73■□□□□ 0.11
TSPAN3-207ENST00000559494 CRYGCP07315 174 aa15.73■□□□□ 0.11
TSPAN3-207ENST00000559494 TRAPPC2P0DI81 140 aa15.73■□□□□ 0.11
TSPAN3-207ENST00000559494 TRAPPC2BP0DI82 140 aa15.73■□□□□ 0.11
TSPAN3-207ENST00000559494 AKR1C2P52895 323 aa15.73■□□□□ 0.11
TSPAN3-207ENST00000559494 DEFB136Q30KP8 78 aa15.73■□□□□ 0.11
TSPAN3-207ENST00000559494 TMEM128Q5BJH2 165 aa15.73■□□□□ 0.11
TSPAN3-207ENST00000559494 C19orf35Q6ZS72 473 aa15.73■□□□□ 0.11
TSPAN3-207ENST00000559494 SLC25A42Q86VD7 318 aa15.73■□□□□ 0.11
TSPAN3-207ENST00000559494 OR4A16Q8NH70 328 aa15.73■□□□□ 0.11
TSPAN3-207ENST00000559494 C4orf3Q8WVX3 66 aa15.73■□□□□ 0.11
TSPAN3-207ENST00000559494 RBPMSQ93062 196 aaKnown RBP15.73■□□□□ 0.11
TSPAN3-207ENST00000559494 RAX2Q96IS3 184 aa15.73■□□□□ 0.11
TSPAN3-207ENST00000559494 QTRT1Q9BXR0 403 aaKnown RBP15.73■□□□□ 0.11
TSPAN3-207ENST00000559494 FKBP11Q9NYL4 201 aa15.73■□□□□ 0.11
TSPAN3-207ENST00000559494 TBC1D24Q9ULP9 559 aa15.73■□□□□ 0.11
TSPAN3-207ENST00000559494 FLVCR2Q9UPI3 526 aa15.73■□□□□ 0.11
TSPAN3-207ENST00000559494 NPIPB5A8MRT5 1133 aa15.72■□□□□ 0.11
TSPAN3-207ENST00000559494 CTRB1P17538 263 aa15.72■□□□□ 0.11
TSPAN3-207ENST00000559494 PSMB6P28072 239 aa15.72■□□□□ 0.11
TSPAN3-207ENST00000559494 MYCNOSP40205 109 aa15.72■□□□□ 0.11
TSPAN3-207ENST00000559494 RUNX1Q01196 453 aa15.72■□□□□ 0.11
TSPAN3-207ENST00000559494 TMEM268Q5VZI3 342 aa15.72■□□□□ 0.11
TSPAN3-207ENST00000559494 CTRB2Q6GPI1 263 aa15.72■□□□□ 0.11
TSPAN3-207ENST00000559494 Q6ZRM9 215 aa15.72■□□□□ 0.11
TSPAN3-207ENST00000559494 CENPSQ8N2Z9 138 aa15.72■□□□□ 0.11
TSPAN3-207ENST00000559494 SRSF8Q9BRL6 282 aaKnown RBP15.72■□□□□ 0.11
TSPAN3-207ENST00000559494 ZNF257Q9Y2Q1 563 aa15.72■□□□□ 0.11
TSPAN3-207ENST00000559494 TRBV9A0A0B4J1U6 114 aa15.71■□□□□ 0.11
TSPAN3-207ENST00000559494 CCL24O00175 119 aa15.71■□□□□ 0.11
TSPAN3-207ENST00000559494 IGHV3-11P01762 117 aa15.71■□□□□ 0.11
TSPAN3-207ENST00000559494 PF4P02776 101 aa15.71■□□□□ 0.11
TSPAN3-207ENST00000559494 REG1AP05451 166 aa15.71■□□□□ 0.11
TSPAN3-207ENST00000559494 DEFA5Q01523 94 aa15.71■□□□□ 0.11
TSPAN3-207ENST00000559494 OR5B3Q8NH48 314 aa15.71■□□□□ 0.11
TSPAN3-207ENST00000559494 GPR146Q96CH1 333 aa15.71■□□□□ 0.11
TSPAN3-207ENST00000559494 RRNAD1Q96FB5 475 aaKnown RBP15.71■□□□□ 0.11
TSPAN3-207ENST00000559494 P2RX4Q99571 388 aa15.71■□□□□ 0.11
TSPAN3-207ENST00000559494 HINT2Q9BX68 163 aa15.71■□□□□ 0.11
TSPAN3-207ENST00000559494 ALX4Q9H161 411 aaPredicted RBP15.71■□□□□ 0.11
TSPAN3-207ENST00000559494 HSPE1P61604 102 aaKnown RBP15.7■□□□□ 0.1
TSPAN3-207ENST00000559494 WT1-ASQ06250 92 aa15.7■□□□□ 0.1
TSPAN3-207ENST00000559494 PPP1R1AQ13522 171 aa15.7■□□□□ 0.1
TSPAN3-207ENST00000559494 MRPL41Q8IXM3 137 aaKnown RBP15.7■□□□□ 0.1
TSPAN3-207ENST00000559494 WFDC9Q8NEX5 89 aa15.7■□□□□ 0.1
TSPAN3-207ENST00000559494 IL22RA2Q969J5 263 aa15.7■□□□□ 0.1
TSPAN3-207ENST00000559494 FANCD2OSQ96PS1 177 aa15.7■□□□□ 0.1
TSPAN3-207ENST00000559494 SFT2D2O95562 160 aa15.69■□□□□ 0.1
TSPAN3-207ENST00000559494 OR13C7P0DN81 318 aa15.69■□□□□ 0.1
TSPAN3-207ENST00000559494 ANXA3P12429 323 aa15.69■□□□□ 0.1
TSPAN3-207ENST00000559494 RHOGP84095 191 aa15.69■□□□□ 0.1
TSPAN3-207ENST00000559494 KLK9Q2XQG4 91 aa15.69■□□□□ 0.1
TSPAN3-207ENST00000559494 THOC7Q6I9Y2 204 aaKnown RBP15.69■□□□□ 0.1
TSPAN3-207ENST00000559494 ZNF429Q86V71 674 aa15.69■□□□□ 0.1
TSPAN3-207ENST00000559494 FAM219AQ8IW50 185 aa15.69■□□□□ 0.1
TSPAN3-207ENST00000559494 LINC00482Q8N8I6 264 aa15.69■□□□□ 0.1
TSPAN3-207ENST00000559494 OR11H1Q8NG94 326 aa15.69■□□□□ 0.1
TSPAN3-207ENST00000559494 RNASE11Q8TAA1 199 aaKnown RBP15.69■□□□□ 0.1
TSPAN3-207ENST00000559494 KLK9Q9UKQ9 250 aa15.69■□□□□ 0.1
TSPAN3-207ENST00000559494 A0A0G2JLM5 398 aa15.68■□□□□ 0.1
TSPAN3-207ENST00000559494 C13orf42A0A1B0GVH6 325 aa15.68■□□□□ 0.1
TSPAN3-207ENST00000559494 LGALS1P09382 135 aaKnown RBP15.68■□□□□ 0.1
TSPAN3-207ENST00000559494 VAMP1P23763 118 aa15.68■□□□□ 0.1
TSPAN3-207ENST00000559494 ASAH1Q13510 395 aa15.68■□□□□ 0.1
TSPAN3-207ENST00000559494 ANKRD55Q3KP44 614 aa15.68■□□□□ 0.1
TSPAN3-207ENST00000559494 LYZL2Q7Z4W2 148 aa15.68■□□□□ 0.1
TSPAN3-207ENST00000559494 LGI3Q8N145 548 aa15.68■□□□□ 0.1
TSPAN3-207ENST00000559494 SLC35G3Q8N808 338 aa15.68■□□□□ 0.1
TSPAN3-207ENST00000559494 OR1N2Q8NGR9 330 aa15.68■□□□□ 0.1
TSPAN3-207ENST00000559494 LSM10Q969L4 123 aaKnown RBP15.68■□□□□ 0.1
TSPAN3-207ENST00000559494 USMG5Q96IX5 58 aa15.68■□□□□ 0.1
TSPAN3-207ENST00000559494 NOTCH1P46531 2555 aa15.68■□□□□ 0.1
TSPAN3-207ENST00000559494 ST8SIA3O43173 380 aa15.68■□□□□ 0.1
TSPAN3-207ENST00000559494 OR2J3O76001 311 aa15.68■□□□□ 0.1
TSPAN3-207ENST00000559494 UBE2MP61081 183 aaKnown RBP15.68■□□□□ 0.1
TSPAN3-207ENST00000559494 HSD17B13Q7Z5P4 300 aaPredicted RBP15.68■□□□□ 0.1
TSPAN3-207ENST00000559494 DMRT1Q9Y5R6 373 aa15.68■□□□□ 0.1
TSPAN3-207ENST00000559494 A0A0B4J2A0 478 aa15.67■□□□□ 0.1
TSPAN3-207ENST00000559494 TCRBP04435 133 aa15.67■□□□□ 0.1
TSPAN3-207ENST00000559494 ANXA7P20073 488 aaKnown RBP15.67■□□□□ 0.1
TSPAN3-207ENST00000559494 SRPXP78539 464 aa15.67■□□□□ 0.1
TSPAN3-207ENST00000559494 PRCDQ00LT1 54 aa15.67■□□□□ 0.1
TSPAN3-207ENST00000559494 FHL3Q13643 280 aa15.67■□□□□ 0.1
TSPAN3-207ENST00000559494 NECAP1Q8NC96 275 aa15.67■□□□□ 0.1
TSPAN3-207ENST00000559494 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.67■□□□□ 0.1
TSPAN3-207ENST00000559494 SHPKQ9UHJ6 478 aa15.67■□□□□ 0.1
TSPAN3-207ENST00000559494 FBXL7Q9UJT9 491 aa15.67■□□□□ 0.1
TSPAN3-207ENST00000559494 IGLV11-55A0A075B6I3 123 aa15.66■□□□□ 0.1
TSPAN3-207ENST00000559494 IGHV4OR15-8A0A075B7B6 117 aa15.66■□□□□ 0.1
TSPAN3-207ENST00000559494 A0A087WW49 117 aa15.66■□□□□ 0.1
TSPAN3-207ENST00000559494 C9orf170A2RU37 121 aa15.66■□□□□ 0.1
TSPAN3-207ENST00000559494 FAM223BA6NKX1 122 aa15.66■□□□□ 0.1
TSPAN3-207ENST00000559494 NDUFB8O95169 186 aa15.66■□□□□ 0.1
TSPAN3-207ENST00000559494 DHFRP00374 187 aa15.66■□□□□ 0.1
TSPAN3-207ENST00000559494 DEFA4P12838 97 aa15.66■□□□□ 0.1
TSPAN3-207ENST00000559494 CD33P20138 364 aa15.66■□□□□ 0.1
TSPAN3-207ENST00000559494 ATP5G2Q06055 141 aa15.66■□□□□ 0.1
TSPAN3-207ENST00000559494 ZNF616Q08AN1 781 aa15.66■□□□□ 0.1
TSPAN3-207ENST00000559494 AARDQ4LEZ3 155 aa15.66■□□□□ 0.1
TSPAN3-207ENST00000559494 SPINK9Q5DT21 86 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms